IslandPathversion 1.0

IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 51.77 STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
453	 49.28	0	481845..482051	+	68	15793499	-	NMA0500	-	hypothetical protein
454	 55.70	0	482129..482575	-	148	15793500	-	NMA0501	-	hypothetical protein
455	 54.46	0	482707..482919	-	70	15793501	rpsU	NMA0502	-	30S ribosomal protein S21
456	 60.29	+1	483208..485058	-	616	15793502	-	NMA0503	-	transglycosylase
457	 57.45	0	485588..486325	+	245	15793503	-	NMA0504	-	ABC transport ATP-binding subunit
458	 58.66	0	486327..487013	+	228	15793504	-	NMA0505	-	inner membrane transport protein
459	 55.67	0	487103..487966	+	287	15793505	-	NMA0506	-	lipoprotein
460	 58.25	0	488028..488597	-	189	15793506	-	NMA0507	-	aromatic acid decarboxylase
461	 56.68	0	488755..489615	+	286	15793507	-	NMA0508	-	chromosome segregation proteins
462	 50.15	0	489750..490088	+	112	15793508	-	NMA0510	-	hypothetical protein
463	 52.68	0	490197..490961	+	254	15793509	-	NMA0511	-	IS1655 transposase
464	 48.59	0	491540..491893	+	117	15793510	atpI	NMA0512	-	ATP synthase I
465	 50.63	0	491883..492749	+	288	15793511	atpB	NMA0513	-	F0F1 ATP synthase subunit A
466	 50.63	0	492806..493042	+	78	15793512	atpE	NMA0514	-	F0F1 ATP synthase subunit C
467	 51.59	0	493113..493583	+	156	15793513	atpF	NMA0515	-	F0F1 ATP synthase subunit B
468	 45.69	0	493588..494121	+	177	15793514	atpH	NMA0516	-	F0F1 ATP synthase subunit delta
469	 50.97	0	494132..495679	+	515	15793515	atpA	NMA0517	-	F0F1 ATP synthase subunit alpha
470	 46.80	0	495704..496579	+	291	15793516	atpG	NMA0518	-	F0F1 ATP synthase subunit gamma
471	 51.86	0	496617..498014	+	465	15793517	atpD	NMA0519	-	F0F1 ATP synthase subunit beta
472	 50.83	0	498025..498447	+	140	15793518	atpC	NMA0520	-	F0F1 ATP synthase subunit epsilon
473	 56.29	0	498802..499707	+	301	15793519	glyQ	NMA0521	-	glycyl-tRNA synthetase subunit alpha
474	 52.55	0	499784..500194	+	136	15793520	-	NMA0522	-	hypothetical protein
475	 56.01	0	500215..502278	+	687	15793521	glyS	NMA0523	-	glycyl-tRNA synthetase subunit beta
476	 51.49	0	502343..503383	+	346	15793522	lgtA	NMA0524	-	lacto-N-neotetraose biosynthesis glycosyl tranferase
477	 55.83	0	503383..504222	+	279	15793523	lgtB	NMA0525	-	lacto-N-neotetraose biosynthesis glycosyl tranferase
478	 55.51	0	504371..505177	+	268	15793524	lgtB2	NMA0527	-	lacto-N-neotetraose biosynthesis glycosyl tranferase
479	 59.64	+1	507126..507851	-	241	15793525	-	NMA0528	-	hypothetical protein
480	 56.10	0	508060..508854	+	264	15793526	-	NMA0529	-	hypothetical protein
481	 57.97	0	512369..513115	-	248	15793528	fabG	NMA0533	-	3-ketoacyl-(acyl-carrier-protein) reductase
482	 54.53	0	513177..514742	-	521	15793529	guaA	NMA0534	-	bifunctional GMP synthase/glutamine amidotransferase protein
483	 57.23	0	514842..516707	-	621	15793530	-	NMA0535	-	ABC transporter ATP-binding protein
484	 59.98	+1	516845..517771	-	308	15793531	fabD	NMA0536	-	acyl-carrier-protein S-malonyltransferase
485	 54.92	0	517957..518322	-	121	15793532	-	NMA0537	-	integral membrane protein
486	 57.11	0	518369..519331	-	320	15793533	fabH	NMA0538	-	3-oxoacyl-(acyl carrier protein) synthase III
487	 36.38	-2	519581..520006	-	141	15793534	-	NMA0540	-	hypothetical protein
488	 39.29	-1	520024..520275	-	83	15793535	-	NMA0541	-	hypothetical protein
489	 57.58	0	520411..521466	-	351	15793536	plsX	NMA0542	-	putative glycerol-3-phosphate acyltransferase PlsX
490	 52.27	0	521554..522081	-	175	15793537	-	NMA0543	-	hypothetical protein
491	 57.22	0	522409..522588	-	59	15793538	rpmF	NMA0544	-	50S ribosomal protein L32
492	 50.99	0	522622..523125	-	167	15793539	-	NMA0545	-	hypothetical protein
493	 55.33	0	523273..523863	+	196	15793540	maf	NMA0546	-	Maf-like protein
494	 51.93	0	523910..524635	+	241	15793541	-	NMA0547	-	hypothetical protein
495	 54.95	0	524716..526353	-	545	15793542	-	NMA0548	-	putative inner membrane protein translocase component YidC
496	 56.36	0	526525..526815	-	96	15793543	-	NMA0549	-	hypothetical protein
497	 55.46	0	526812..527177	-	121	15793544	rnpA	NMA0550	-	ribonuclease P
498	 61.48	+1	527180..527314	-	44	15793545	rpmH	NMA0551	-	50S ribosomal protein L34
499	 55.23	0	527602..529158	+	518	15793546	dnaA	NMA0552	-	chromosomal replication initiator protein
500	 55.89	0	529238..530341	+	367	15793547	dnaN	NMA0553	-	DNA polymerase III subunit beta
501	 47.14	0	530526..531119	-	197	15793548	-	NMA0554	-	IS1016 transposase
502	 60.11	+1	531352..533409	-	685	15793549	ppk	NMA0555	-	polyphosphate kinase
503	 52.93	0	533578..534021	-	147	15793550	-	NMA0556	-	periplasmic protein
504	 54.46	0	534028..534543	-	171	15793551	mlp	NMA0557	-	lipoprotein
505	 55.73	0	534813..537545	+	910	15793552	leuS	NMA0559	-	leucyl-tRNA synthetase
506	 42.17	-1	537775..538566	+	263	15793553	drg	NMA0560	-	type II restriction endonuclease
507	 46.15	0	538898..539779	+	293	15793554	-	NMA0562	-	hypothetical protein
508	 50.00	0	540060..540155	-	31	15793555	-	NMA0563	-	hypothetical protein
509	 51.92	0	540161..540472	-	103	15793556	-	NMA0564	-	DNA-binding protein
510	 48.51	0	540469..540837	-	122	15793557	-	NMA0565	-	hypothetical protein
511	 38.10	-1	541086..541232	+	48	15793558	-	NMA0567	-	hypothetical protein
512	 50.00	0	541335..541538	+	67	15793559	-	NMA0568	-	hypothetical protein
513	 51.57	0	541736..542086	-	116	15793560	secG	NMA0569	-	preprotein translocase subunit SecG
514	 56.61	0	542093..542848	-	251	15793561	tpiA	NMA0570	-	triosephosphate isomerase
515	 56.63	0	543026..543553	+	175	15793562	-	NMA0571	-	hypothetical protein
516	 52.97	0	543655..544311	+	218	15793563	-	NMA0572	-	protein-L-isoaspartate O-methyltransferase
517	 55.56	0	544391..544714	+	107	15793564	-	NMA0573	-	hypothetical protein
518	 49.79	0	544723..544959	-	78	15793565	-	NMA0574	-	hypothetical protein
519	 62.49	+1	545129..547306	-	725	15793566	-	NMA0575	-	ferric siderophore receptor protein
520	 58.64	0	547420..547743	-	107	15793567	-	NMA0576	-	hypothetical protein
521	 60.97	+1	548781..549746	-	321	15793568	fetB2	NMA0577	-	ferric enterobactin transporter binding protein
522	 61.96	+1	549982..550938	+	318	15793569	-	NMA0578	-	AraC family transcription regulator
523	 56.94	0	551052..553067	-	671	15793570	-	NMA0579	-	prolyl endopeptidase
524	 62.93	+1	553268..554578	-	436	15793571	argA	NMA0580	-	N-acetylglutamate synthase
525	 56.78	0	554575..555009	-	144	15793572	-	NMA0581	-	hypothetical protein
526	 55.45	0	555083..555724	-	213	15793573	pyrE	NMA0582	-	orotate phosphoribosyltransferase
527	 62.06	+1	555786..556523	-	245	15793574	-	NMA0583	-	hypothetical protein
528	 58.73	0	556517..556957	-	146	15793575	-	NMA0584	-	acetyltransferase
529	 62.24	+1	556954..557631	-	225	15793576	-	NMA0585	-	hypothetical protein
530	 54.09	0	557771..558613	-	280	15793577	-	NMA0586	-	lipoprotein
531	 56.15	0	558939..560003	-	354	15793578	fba	NMA0587	-	fructose-1,6-bisphosphate aldolase
532	 61.87	+1	560197..561114	+	305	15793579	xerC	NMA0588	-	integrase/recombinase
533	 58.52	0	561199..563112	+	637	15793580	dxs	NMA0589	-	1-deoxy-D-xylulose-5-phosphate synthase
534	 56.28	0	563197..564525	-	442	15793581	-	NMA0590	-	hypothetical protein
535	 50.00	0	564983..565294	+	103	15793582	-	NMA0591	-	hypothetical protein
536	 58.26	0	565358..566641	+	427	15793583	hemL	NMA0592	-	glutamate-1-semialdehyde aminotransferase
537	 52.13	0	567140..567703	-	187	15793584	orn	NMA0594	-	oligoribonuclease
538	 59.57	+1	567721..568608	-	295	15793585	prmA	NMA0595	-	ribosomal protein L11 methyltransferase
539	 57.05	0	568869..570230	-	453	15793586	accC	NMA0596	-	acetyl-CoA carboxylase biotin carboxylase component
540	 57.89	0	570343..570798	-	151	15793587	accB	NMA0597	-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
541	 50.31	0	570822..570980	+	52	15793588	-	NMA0598	-	hypothetical protein
542	 58.60	0	571154..572194	+	346	15793589	queA	NMA0599	-	S-adenosylmethionine:tRNA ribosyltransferase-isomerase
543	 47.15	0	572565..573143	-	192	15793590	-	NMA0600	-	hypothetical protein
544	 51.78	0	573382..574281	+	299	15793591	-	NMA0601	-	LysR family transcriptional regulator
545	 56.78	0	574508..577723	-	1071	15793592	carB	NMA0602	-	carbamoyl phosphate synthase large subunit
546	 30.60	-2	577730..578278	-	182	15793593	-	NMA0603	-	hypothetical protein
547	 30.32	-2	578281..578844	-	187	15793594	-	NMA0604	-	hypothetical protein
548	 52.82	0	579695..580084	-	129	15793595	-	NMA0605	-	hypothetical protein
549	 43.33	-1	580081..580260	-	59	15793596	-	NMA0606	-	hypothetical protein
550	 44.20	-1	580363..580500	-	45	15793597	-	NMA0607	-	hypothetical protein
551	 57.41	0	580546..581679	-	377	15793598	carA	NMA0608	-	carbamoyl phosphate synthase small subunit
552	 51.03	0	583916..587029	-	1037	15793599	pilC1	NMA0609	-	pilus-associated protein
51.77	MEAN

7.09	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.