IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
416	 45.98	0	440504..441175	-	223	15793462	-	NMA0459	-	hypothetical protein
417	 53.77	0	441460..441777	+	105	15793463	-	NMA0461	-	truncated IS1106A2 transposase
418	 56.98	0	441995..444811	-	938	15793464	polA	NMA0462	-	DNA polymerase I
419	 53.25	0	444957..445463	-	168	15793465	-	NMA0463	-	S-ribosylhomocysteinase
420	 44.76	0	445485..445904	-	139	15793466	-	NMA0464	-	hypothetical protein
421	 39.13	-1	445930..446946	-	338	15793467	-	NMA0465	-	hypothetical protein
422	 53.40	0	446973..447296	-	107	15793468	cyaY	NMA0466	-	frataxin-like protein
423	 55.56	0	447367..447537	+	56	15793469	-	NMA0467	-	lipoprotein
424	 55.77	0	447548..448768	+	406	15793470	lysA	NMA0468	-	diaminopimelate decarboxylase
425	 56.05	0	448917..450452	-	511	15793471	-	NMA0470	-	sodium-dependent inner membrane transport protein
426	 47.55	0	450665..451318	-	217	15793472	-	NMA0471	-	IS1016 transposase
427	 54.64	0	451547..451837	+	96	15793473	groES	NMA0472	-	co-chaperonin GroES
428	 54.80	0	451930..453564	+	544	15793474	groEL	NMA0473	-	chaperonin GroEL
429	 55.45	0	454152..456584	-	810	15793475	hpuB	NMA0474	-	haemoglobin-haptoglobin-utilization protein
430	 53.72	0	456615..457688	-	357	15793476	hpuA	NMA0475	-	haemoglobin-haptoglobin-utilization protein
431	 56.19	0	458956..460473	+	505	15793477	-	NMA0476	-	hypothetical protein
432	 57.71	0	460532..462328	-	598	15793478	-	NMA0477	-	para-aminobenzoate synthase component I
433	 56.41	0	463713..466919	-	1068	15793479	-	NMA0478	-	outer membrane peptidase
434	 57.10	0	468118..469560	-	480	15793480	aldA	NMA0480	-	aldehyde dehydrogenase A
435	 40.80	-1	469595..469795	-	66	15793481	-	NMA0481	-	hypothetical protein
436	 25.90	-2	469804..470193	-	129	15793482	-	NMA0482	-	hypothetical protein
437	 56.54	0	470401..471318	-	305	15793483	-	NMA0483	-	transcriptional regulator
438	 55.75	0	471431..472291	+	286	15793484	-	NMA0485	-	ABC transport ATP-binding protein
439	 55.34	0	472339..473115	+	258	15793485	-	NMA0486	-	ABC transport inner membrane subunit
440	 56.77	0	473166..473660	+	164	15793486	-	NMA0487	-	outer membrane transport protein
441	 52.28	0	473697..474287	+	196	15793487	-	NMA0488	-	periplasmic transport protein
442	 57.10	0	474320..474622	+	100	15793488	-	NMA0489	-	hypothetical protein
443	 57.38	0	474619..475458	+	279	15793489	-	NMA0490	-	periplasmic/outer membrane protein
444	 54.45	0	475463..475945	+	160	15793490	-	NMA0491	-	hypothetical protein
445	 59.64	+1	475945..476328	+	127	15793491	-	NMA0492	-	hypothetical protein
446	 50.72	0	476325..476813	+	162	15793492	-	NMA0493	-	periplasmic protein
447	 57.89	0	476895..477407	-	170	15793493	-	NMA0494	-	acetyltransferase
448	 47.69	0	477642..477857	+	71	15793494	rpmE	NMA0495	-	50S ribosomal protein L31
449	 34.74	-2	478160..478801	+	213	15793495	cad	NMA0496	-	cadmium resistance protein
450	 59.57	+1	478957..480633	+	558	15793496	-	NMA0497	-	inner membrane protein
451	 54.13	0	480735..481340	+	201	15793497	regF	NMA0498	-	regulator of pilE expression
452	 57.00	0	481412..481804	+	130	15793498	regG	NMA0499	-	ClpXP protease specificity-enhancing factor
453	 49.28	0	481845..482051	+	68	15793499	-	NMA0500	-	hypothetical protein
454	 55.70	0	482129..482575	-	148	15793500	-	NMA0501	-	hypothetical protein
455	 54.46	0	482707..482919	-	70	15793501	rpsU	NMA0502	-	30S ribosomal protein S21
456	 60.29	+1	483208..485058	-	616	15793502	-	NMA0503	-	transglycosylase
457	 57.45	0	485588..486325	+	245	15793503	-	NMA0504	-	ABC transport ATP-binding subunit
458	 58.66	0	486327..487013	+	228	15793504	-	NMA0505	-	inner membrane transport protein
459	 55.67	0	487103..487966	+	287	15793505	-	NMA0506	-	lipoprotein
460	 58.25	0	488028..488597	-	189	15793506	-	NMA0507	-	aromatic acid decarboxylase
461	 56.68	0	488755..489615	+	286	15793507	-	NMA0508	-	chromosome segregation proteins
462	 50.15	0	489750..490088	+	112	15793508	-	NMA0510	-	hypothetical protein
463	 52.68	0	490197..490961	+	254	15793509	-	NMA0511	-	IS1655 transposase
464	 48.59	0	491540..491893	+	117	15793510	atpI	NMA0512	-	ATP synthase I
465	 50.63	0	491883..492749	+	288	15793511	atpB	NMA0513	-	F0F1 ATP synthase subunit A
466	 50.63	0	492806..493042	+	78	15793512	atpE	NMA0514	-	F0F1 ATP synthase subunit C
467	 51.59	0	493113..493583	+	156	15793513	atpF	NMA0515	-	F0F1 ATP synthase subunit B
468	 45.69	0	493588..494121	+	177	15793514	atpH	NMA0516	-	F0F1 ATP synthase subunit delta
469	 50.97	0	494132..495679	+	515	15793515	atpA	NMA0517	-	F0F1 ATP synthase subunit alpha
470	 46.80	0	495704..496579	+	291	15793516	atpG	NMA0518	-	F0F1 ATP synthase subunit gamma
471	 51.86	0	496617..498014	+	465	15793517	atpD	NMA0519	-	F0F1 ATP synthase subunit beta
472	 50.83	0	498025..498447	+	140	15793518	atpC	NMA0520	-	F0F1 ATP synthase subunit epsilon
473	 56.29	0	498802..499707	+	301	15793519	glyQ	NMA0521	-	glycyl-tRNA synthetase subunit alpha
474	 52.55	0	499784..500194	+	136	15793520	-	NMA0522	-	hypothetical protein
475	 56.01	0	500215..502278	+	687	15793521	glyS	NMA0523	-	glycyl-tRNA synthetase subunit beta
476	 51.49	0	502343..503383	+	346	15793522	lgtA	NMA0524	-	lacto-N-neotetraose biosynthesis glycosyl tranferase
477	 55.83	0	503383..504222	+	279	15793523	lgtB	NMA0525	-	lacto-N-neotetraose biosynthesis glycosyl tranferase
478	 55.51	0	504371..505177	+	268	15793524	lgtB2	NMA0527	-	lacto-N-neotetraose biosynthesis glycosyl tranferase
479	 59.64	+1	507126..507851	-	241	15793525	-	NMA0528	-	hypothetical protein
480	 56.10	0	508060..508854	+	264	15793526	-	NMA0529	-	hypothetical protein
481	 57.97	0	512369..513115	-	248	15793528	fabG	NMA0533	-	3-ketoacyl-(acyl-carrier-protein) reductase
482	 54.53	0	513177..514742	-	521	15793529	guaA	NMA0534	-	bifunctional GMP synthase/glutamine amidotransferase protein
483	 57.23	0	514842..516707	-	621	15793530	-	NMA0535	-	ABC transporter ATP-binding protein
484	 59.98	+1	516845..517771	-	308	15793531	fabD	NMA0536	-	acyl-carrier-protein S-malonyltransferase
485	 54.92	0	517957..518322	-	121	15793532	-	NMA0537	-	integral membrane protein
486	 57.11	0	518369..519331	-	320	15793533	fabH	NMA0538	-	3-oxoacyl-(acyl carrier protein) synthase III
487	 36.38	-2	519581..520006	-	141	15793534	-	NMA0540	-	hypothetical protein
488	 39.29	-1	520024..520275	-	83	15793535	-	NMA0541	-	hypothetical protein
489	 57.58	0	520411..521466	-	351	15793536	plsX	NMA0542	-	putative glycerol-3-phosphate acyltransferase PlsX
490	 52.27	0	521554..522081	-	175	15793537	-	NMA0543	-	hypothetical protein
491	 57.22	0	522409..522588	-	59	15793538	rpmF	NMA0544	-	50S ribosomal protein L32
492	 50.99	0	522622..523125	-	167	15793539	-	NMA0545	-	hypothetical protein
493	 55.33	0	523273..523863	+	196	15793540	maf	NMA0546	-	Maf-like protein
494	 51.93	0	523910..524635	+	241	15793541	-	NMA0547	-	hypothetical protein
495	 54.95	0	524716..526353	-	545	15793542	-	NMA0548	-	putative inner membrane protein translocase component YidC
496	 56.36	0	526525..526815	-	96	15793543	-	NMA0549	-	hypothetical protein
497	 55.46	0	526812..527177	-	121	15793544	rnpA	NMA0550	-	ribonuclease P
498	 61.48	+1	527180..527314	-	44	15793545	rpmH	NMA0551	-	50S ribosomal protein L34
499	 55.23	0	527602..529158	+	518	15793546	dnaA	NMA0552	-	chromosomal replication initiator protein
500	 55.89	0	529238..530341	+	367	15793547	dnaN	NMA0553	-	DNA polymerase III subunit beta
501	 47.14	0	530526..531119	-	197	15793548	-	NMA0554	-	IS1016 transposase
502	 60.11	+1	531352..533409	-	685	15793549	ppk	NMA0555	-	polyphosphate kinase
503	 52.93	0	533578..534021	-	147	15793550	-	NMA0556	-	periplasmic protein
504	 54.46	0	534028..534543	-	171	15793551	mlp	NMA0557	-	lipoprotein
505	 55.73	0	534813..537545	+	910	15793552	leuS	NMA0559	-	leucyl-tRNA synthetase
506	 42.17	-1	537775..538566	+	263	15793553	drg	NMA0560	-	type II restriction endonuclease
507	 46.15	0	538898..539779	+	293	15793554	-	NMA0562	-	hypothetical protein
508	 50.00	0	540060..540155	-	31	15793555	-	NMA0563	-	hypothetical protein
509	 51.92	0	540161..540472	-	103	15793556	-	NMA0564	-	DNA-binding protein
510	 48.51	0	540469..540837	-	122	15793557	-	NMA0565	-	hypothetical protein
511	 38.10	-1	541086..541232	+	48	15793558	-	NMA0567	-	hypothetical protein
512	 50.00	0	541335..541538	+	67	15793559	-	NMA0568	-	hypothetical protein
513	 51.57	0	541736..542086	-	116	15793560	secG	NMA0569	-	preprotein translocase subunit SecG
514	 56.61	0	542093..542848	-	251	15793561	tpiA	NMA0570	-	triosephosphate isomerase
515	 56.63	0	543026..543553	+	175	15793562	-	NMA0571	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.