IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
388	 36.64	-2	401471..401893	+	140	15793434	vsr	NMA0429	-	patch repair protein
389	 57.01	0	401916..405041	-	1041	15793435	-	NMA0430	-	DNA helicase
390	 48.86	0	405107..406381	-	424	15793436	-	NMA0431	-	inner membrane protein
391	 42.91	-1	406562..407689	-	375	15793437	-	NMA0432	-	hypothetical protein
392	 57.40	0	407790..409181	-	463	15793438	hrpA'	NMA0433	-	ATP-dependent DNA helicase
393	 61.49	+1	409371..410780	-	469	15793439	-	NMA0434	-	hypothetical protein
394	 61.51	+1	410943..412163	-	406	15793440	argJ	NMA0435	-	bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
395	 57.86	0	412230..412922	-	230	15793441	-	NMA0436	-	hypothetical protein
396	 56.81	0	412922..413266	-	114	15793442	-	NMA0437	-	hypothetical protein
397	 46.99	0	413263..413445	-	60	15793443	-	NMA0438	-	hypothetical protein
398	 52.05	0	413411..413629	-	72	15793444	-	NMA0439	-	hypothetical protein
399	 61.09	+1	413648..414490	-	280	15793445	-	NMA0440	-	hypothetical protein
400	 58.75	0	414735..415643	+	302	161353794	hslO	NMA0441	-	Hsp33-like chaperonin
401	 56.98	0	415729..417183	-	484	15793447	-	NMA0442	-	hypothetical protein
402	 60.29	+1	417417..418169	-	250	15793448	-	NMA0444	-	hydroxyacylglutathione hydrolase
403	 55.97	0	418264..422226	-	1320	15793449	purL	NMA0445	-	phosphoribosylformylglycinamidine synthase
404	 56.93	0	422690..423028	+	112	15793450	glnB	NMA0447	-	nitrogen regulatory protein P-II 1
405	 58.76	0	423084..423842	-	252	15793451	-	NMA0448	-	ABC transporter ATP-binding subunit
406	 62.20	+1	423973..424554	-	193	15793452	-	NMA0449	-	hypothetical protein
407	 55.59	0	424599..425546	-	315	15793453	-	NMA0450	-	inner membrane transport protein
408	 55.62	0	425563..426531	-	322	15793454	-	NMA0451	-	inner membrane transport protein
409	 54.04	0	426802..427767	-	321	15793455	fetB	NMA0452	-	membrane transport solute-binding protein
410	 53.52	0	428465..430609	-	714	15793456	fetA	NMA0453	-	iron-regulated outer membrane protein
411	 59.99	+1	432471..433817	-	448	15793457	trmE	NMA0454	-	tRNA modification GTPase TrmE
412	 53.85	0	433948..434103	+	51	15793458	-	NMA0455	-	hypothetical protein
413	 56.25	0	434100..434531	+	143	15793459	-	NMA0456	-	hypothetical protein
414	 51.91	0	434665..439014	+	1449	15793460	iga2	NMA0457	-	IgA-specific serine endopeptidase
415	 51.48	0	439330..440442	-	370	15793461	-	NMA0458	-	IS1106A3 transposase
416	 45.98	0	440504..441175	-	223	15793462	-	NMA0459	-	hypothetical protein
417	 53.77	0	441460..441777	+	105	15793463	-	NMA0461	-	truncated IS1106A2 transposase
418	 56.98	0	441995..444811	-	938	15793464	polA	NMA0462	-	DNA polymerase I
419	 53.25	0	444957..445463	-	168	15793465	-	NMA0463	-	S-ribosylhomocysteinase
420	 44.76	0	445485..445904	-	139	15793466	-	NMA0464	-	hypothetical protein
421	 39.13	-1	445930..446946	-	338	15793467	-	NMA0465	-	hypothetical protein
422	 53.40	0	446973..447296	-	107	15793468	cyaY	NMA0466	-	frataxin-like protein
423	 55.56	0	447367..447537	+	56	15793469	-	NMA0467	-	lipoprotein
424	 55.77	0	447548..448768	+	406	15793470	lysA	NMA0468	-	diaminopimelate decarboxylase
425	 56.05	0	448917..450452	-	511	15793471	-	NMA0470	-	sodium-dependent inner membrane transport protein
426	 47.55	0	450665..451318	-	217	15793472	-	NMA0471	-	IS1016 transposase
427	 54.64	0	451547..451837	+	96	15793473	groES	NMA0472	-	co-chaperonin GroES
428	 54.80	0	451930..453564	+	544	15793474	groEL	NMA0473	-	chaperonin GroEL
429	 55.45	0	454152..456584	-	810	15793475	hpuB	NMA0474	-	haemoglobin-haptoglobin-utilization protein
430	 53.72	0	456615..457688	-	357	15793476	hpuA	NMA0475	-	haemoglobin-haptoglobin-utilization protein
431	 56.19	0	458956..460473	+	505	15793477	-	NMA0476	-	hypothetical protein
432	 57.71	0	460532..462328	-	598	15793478	-	NMA0477	-	para-aminobenzoate synthase component I
433	 56.41	0	463713..466919	-	1068	15793479	-	NMA0478	-	outer membrane peptidase
434	 57.10	0	468118..469560	-	480	15793480	aldA	NMA0480	-	aldehyde dehydrogenase A
435	 40.80	-1	469595..469795	-	66	15793481	-	NMA0481	-	hypothetical protein
436	 25.90	-2	469804..470193	-	129	15793482	-	NMA0482	-	hypothetical protein
437	 56.54	0	470401..471318	-	305	15793483	-	NMA0483	-	transcriptional regulator
438	 55.75	0	471431..472291	+	286	15793484	-	NMA0485	-	ABC transport ATP-binding protein
439	 55.34	0	472339..473115	+	258	15793485	-	NMA0486	-	ABC transport inner membrane subunit
440	 56.77	0	473166..473660	+	164	15793486	-	NMA0487	-	outer membrane transport protein
441	 52.28	0	473697..474287	+	196	15793487	-	NMA0488	-	periplasmic transport protein
442	 57.10	0	474320..474622	+	100	15793488	-	NMA0489	-	hypothetical protein
443	 57.38	0	474619..475458	+	279	15793489	-	NMA0490	-	periplasmic/outer membrane protein
444	 54.45	0	475463..475945	+	160	15793490	-	NMA0491	-	hypothetical protein
445	 59.64	+1	475945..476328	+	127	15793491	-	NMA0492	-	hypothetical protein
446	 50.72	0	476325..476813	+	162	15793492	-	NMA0493	-	periplasmic protein
447	 57.89	0	476895..477407	-	170	15793493	-	NMA0494	-	acetyltransferase
448	 47.69	0	477642..477857	+	71	15793494	rpmE	NMA0495	-	50S ribosomal protein L31
449	 34.74	-2	478160..478801	+	213	15793495	cad	NMA0496	-	cadmium resistance protein
450	 59.57	+1	478957..480633	+	558	15793496	-	NMA0497	-	inner membrane protein
451	 54.13	0	480735..481340	+	201	15793497	regF	NMA0498	-	regulator of pilE expression
452	 57.00	0	481412..481804	+	130	15793498	regG	NMA0499	-	ClpXP protease specificity-enhancing factor
453	 49.28	0	481845..482051	+	68	15793499	-	NMA0500	-	hypothetical protein
454	 55.70	0	482129..482575	-	148	15793500	-	NMA0501	-	hypothetical protein
455	 54.46	0	482707..482919	-	70	15793501	rpsU	NMA0502	-	30S ribosomal protein S21
456	 60.29	+1	483208..485058	-	616	15793502	-	NMA0503	-	transglycosylase
457	 57.45	0	485588..486325	+	245	15793503	-	NMA0504	-	ABC transport ATP-binding subunit
458	 58.66	0	486327..487013	+	228	15793504	-	NMA0505	-	inner membrane transport protein
459	 55.67	0	487103..487966	+	287	15793505	-	NMA0506	-	lipoprotein
460	 58.25	0	488028..488597	-	189	15793506	-	NMA0507	-	aromatic acid decarboxylase
461	 56.68	0	488755..489615	+	286	15793507	-	NMA0508	-	chromosome segregation proteins
462	 50.15	0	489750..490088	+	112	15793508	-	NMA0510	-	hypothetical protein
463	 52.68	0	490197..490961	+	254	15793509	-	NMA0511	-	IS1655 transposase
464	 48.59	0	491540..491893	+	117	15793510	atpI	NMA0512	-	ATP synthase I
465	 50.63	0	491883..492749	+	288	15793511	atpB	NMA0513	-	F0F1 ATP synthase subunit A
466	 50.63	0	492806..493042	+	78	15793512	atpE	NMA0514	-	F0F1 ATP synthase subunit C
467	 51.59	0	493113..493583	+	156	15793513	atpF	NMA0515	-	F0F1 ATP synthase subunit B
468	 45.69	0	493588..494121	+	177	15793514	atpH	NMA0516	-	F0F1 ATP synthase subunit delta
469	 50.97	0	494132..495679	+	515	15793515	atpA	NMA0517	-	F0F1 ATP synthase subunit alpha
470	 46.80	0	495704..496579	+	291	15793516	atpG	NMA0518	-	F0F1 ATP synthase subunit gamma
471	 51.86	0	496617..498014	+	465	15793517	atpD	NMA0519	-	F0F1 ATP synthase subunit beta
472	 50.83	0	498025..498447	+	140	15793518	atpC	NMA0520	-	F0F1 ATP synthase subunit epsilon
473	 56.29	0	498802..499707	+	301	15793519	glyQ	NMA0521	-	glycyl-tRNA synthetase subunit alpha
474	 52.55	0	499784..500194	+	136	15793520	-	NMA0522	-	hypothetical protein
475	 56.01	0	500215..502278	+	687	15793521	glyS	NMA0523	-	glycyl-tRNA synthetase subunit beta
476	 51.49	0	502343..503383	+	346	15793522	lgtA	NMA0524	-	lacto-N-neotetraose biosynthesis glycosyl tranferase
477	 55.83	0	503383..504222	+	279	15793523	lgtB	NMA0525	-	lacto-N-neotetraose biosynthesis glycosyl tranferase
478	 55.51	0	504371..505177	+	268	15793524	lgtB2	NMA0527	-	lacto-N-neotetraose biosynthesis glycosyl tranferase
479	 59.64	+1	507126..507851	-	241	15793525	-	NMA0528	-	hypothetical protein
480	 56.10	0	508060..508854	+	264	15793526	-	NMA0529	-	hypothetical protein
481	 57.97	0	512369..513115	-	248	15793528	fabG	NMA0533	-	3-ketoacyl-(acyl-carrier-protein) reductase
482	 54.53	0	513177..514742	-	521	15793529	guaA	NMA0534	-	bifunctional GMP synthase/glutamine amidotransferase protein
483	 57.23	0	514842..516707	-	621	15793530	-	NMA0535	-	ABC transporter ATP-binding protein
484	 59.98	+1	516845..517771	-	308	15793531	fabD	NMA0536	-	acyl-carrier-protein S-malonyltransferase
485	 54.92	0	517957..518322	-	121	15793532	-	NMA0537	-	integral membrane protein
486	 57.11	0	518369..519331	-	320	15793533	fabH	NMA0538	-	3-oxoacyl-(acyl carrier protein) synthase III
487	 36.38	-2	519581..520006	-	141	15793534	-	NMA0540	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.