IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
370	 54.76	0	381201..382124	+	307	15793416	thrB	NMA0411	-	homoserine kinase
371	 58.19	0	382463..382981	-	172	15793417	-	NMA0412	-	glucokinase
372	 60.03	+1	383001..384386	-	461	15793418	gntP	NMA0413	-	gluconate permease
373	 61.27	+1	384727..386319	+	530	15793419	-	NMA0414	-	permease
374	 55.67	0	386348..386947	+	199	15793420	-	NMA0415	-	hypothetical protein
375	 59.26	+1	386944..387537	+	197	15793421	-	NMA0416	-	hypothetical protein
376	 55.56	0	387596..387982	+	128	15793422	-	NMA0417	-	hypothetical protein
377	 60.30	+1	388036..388506	+	156	15793423	-	NMA0418	-	SPOUT methyltransferase superfamily protein
378	 55.06	0	388579..388845	+	88	15793424	-	NMA0419	-	hypothetical protein
379	 54.39	0	389002..389685	+	227	15793425	-	NMA0420	-	integral membrane protein
380	 52.83	0	389809..390321	+	170	15793426	coaD	NMA0421	-	phosphopantetheine adenylyltransferase
381	 48.27	0	390347..391009	+	220	15793427	-	NMA0422	-	psedouridine synthase
382	 54.41	0	396694..397158	+	154	15793428	-	NMA0423	-	DNA transport competence protein
383	 37.78	-1	397246..397695	+	149	15793429	-	NMA0424	-	pilin
384	 35.19	-2	397856..398125	-	89	15793430	-	NMA0425	-	hypothetical protein
385	 50.60	0	398238..398486	+	82	15793431	-	NMA0426A	-	hypothetical protein
386	 40.72	-1	398752..399807	+	351	15793432	-	NMA0427	-	modification methylase (cytosine-specific DNA methylase)
387	 37.52	-2	399821..401467	+	548	15793433	-	NMA0428	-	hypothetical protein
388	 36.64	-2	401471..401893	+	140	15793434	vsr	NMA0429	-	patch repair protein
389	 57.01	0	401916..405041	-	1041	15793435	-	NMA0430	-	DNA helicase
390	 48.86	0	405107..406381	-	424	15793436	-	NMA0431	-	inner membrane protein
391	 42.91	-1	406562..407689	-	375	15793437	-	NMA0432	-	hypothetical protein
392	 57.40	0	407790..409181	-	463	15793438	hrpA'	NMA0433	-	ATP-dependent DNA helicase
393	 61.49	+1	409371..410780	-	469	15793439	-	NMA0434	-	hypothetical protein
394	 61.51	+1	410943..412163	-	406	15793440	argJ	NMA0435	-	bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
395	 57.86	0	412230..412922	-	230	15793441	-	NMA0436	-	hypothetical protein
396	 56.81	0	412922..413266	-	114	15793442	-	NMA0437	-	hypothetical protein
397	 46.99	0	413263..413445	-	60	15793443	-	NMA0438	-	hypothetical protein
398	 52.05	0	413411..413629	-	72	15793444	-	NMA0439	-	hypothetical protein
399	 61.09	+1	413648..414490	-	280	15793445	-	NMA0440	-	hypothetical protein
400	 58.75	0	414735..415643	+	302	161353794	hslO	NMA0441	-	Hsp33-like chaperonin
401	 56.98	0	415729..417183	-	484	15793447	-	NMA0442	-	hypothetical protein
402	 60.29	+1	417417..418169	-	250	15793448	-	NMA0444	-	hydroxyacylglutathione hydrolase
403	 55.97	0	418264..422226	-	1320	15793449	purL	NMA0445	-	phosphoribosylformylglycinamidine synthase
404	 56.93	0	422690..423028	+	112	15793450	glnB	NMA0447	-	nitrogen regulatory protein P-II 1
405	 58.76	0	423084..423842	-	252	15793451	-	NMA0448	-	ABC transporter ATP-binding subunit
406	 62.20	+1	423973..424554	-	193	15793452	-	NMA0449	-	hypothetical protein
407	 55.59	0	424599..425546	-	315	15793453	-	NMA0450	-	inner membrane transport protein
408	 55.62	0	425563..426531	-	322	15793454	-	NMA0451	-	inner membrane transport protein
409	 54.04	0	426802..427767	-	321	15793455	fetB	NMA0452	-	membrane transport solute-binding protein
410	 53.52	0	428465..430609	-	714	15793456	fetA	NMA0453	-	iron-regulated outer membrane protein
411	 59.99	+1	432471..433817	-	448	15793457	trmE	NMA0454	-	tRNA modification GTPase TrmE
412	 53.85	0	433948..434103	+	51	15793458	-	NMA0455	-	hypothetical protein
413	 56.25	0	434100..434531	+	143	15793459	-	NMA0456	-	hypothetical protein
414	 51.91	0	434665..439014	+	1449	15793460	iga2	NMA0457	-	IgA-specific serine endopeptidase
415	 51.48	0	439330..440442	-	370	15793461	-	NMA0458	-	IS1106A3 transposase
416	 45.98	0	440504..441175	-	223	15793462	-	NMA0459	-	hypothetical protein
417	 53.77	0	441460..441777	+	105	15793463	-	NMA0461	-	truncated IS1106A2 transposase
418	 56.98	0	441995..444811	-	938	15793464	polA	NMA0462	-	DNA polymerase I
419	 53.25	0	444957..445463	-	168	15793465	-	NMA0463	-	S-ribosylhomocysteinase
420	 44.76	0	445485..445904	-	139	15793466	-	NMA0464	-	hypothetical protein
421	 39.13	-1	445930..446946	-	338	15793467	-	NMA0465	-	hypothetical protein
422	 53.40	0	446973..447296	-	107	15793468	cyaY	NMA0466	-	frataxin-like protein
423	 55.56	0	447367..447537	+	56	15793469	-	NMA0467	-	lipoprotein
424	 55.77	0	447548..448768	+	406	15793470	lysA	NMA0468	-	diaminopimelate decarboxylase
425	 56.05	0	448917..450452	-	511	15793471	-	NMA0470	-	sodium-dependent inner membrane transport protein
426	 47.55	0	450665..451318	-	217	15793472	-	NMA0471	-	IS1016 transposase
427	 54.64	0	451547..451837	+	96	15793473	groES	NMA0472	-	co-chaperonin GroES
428	 54.80	0	451930..453564	+	544	15793474	groEL	NMA0473	-	chaperonin GroEL
429	 55.45	0	454152..456584	-	810	15793475	hpuB	NMA0474	-	haemoglobin-haptoglobin-utilization protein
430	 53.72	0	456615..457688	-	357	15793476	hpuA	NMA0475	-	haemoglobin-haptoglobin-utilization protein
431	 56.19	0	458956..460473	+	505	15793477	-	NMA0476	-	hypothetical protein
432	 57.71	0	460532..462328	-	598	15793478	-	NMA0477	-	para-aminobenzoate synthase component I
433	 56.41	0	463713..466919	-	1068	15793479	-	NMA0478	-	outer membrane peptidase
434	 57.10	0	468118..469560	-	480	15793480	aldA	NMA0480	-	aldehyde dehydrogenase A
435	 40.80	-1	469595..469795	-	66	15793481	-	NMA0481	-	hypothetical protein
436	 25.90	-2	469804..470193	-	129	15793482	-	NMA0482	-	hypothetical protein
437	 56.54	0	470401..471318	-	305	15793483	-	NMA0483	-	transcriptional regulator
438	 55.75	0	471431..472291	+	286	15793484	-	NMA0485	-	ABC transport ATP-binding protein
439	 55.34	0	472339..473115	+	258	15793485	-	NMA0486	-	ABC transport inner membrane subunit
440	 56.77	0	473166..473660	+	164	15793486	-	NMA0487	-	outer membrane transport protein
441	 52.28	0	473697..474287	+	196	15793487	-	NMA0488	-	periplasmic transport protein
442	 57.10	0	474320..474622	+	100	15793488	-	NMA0489	-	hypothetical protein
443	 57.38	0	474619..475458	+	279	15793489	-	NMA0490	-	periplasmic/outer membrane protein
444	 54.45	0	475463..475945	+	160	15793490	-	NMA0491	-	hypothetical protein
445	 59.64	+1	475945..476328	+	127	15793491	-	NMA0492	-	hypothetical protein
446	 50.72	0	476325..476813	+	162	15793492	-	NMA0493	-	periplasmic protein
447	 57.89	0	476895..477407	-	170	15793493	-	NMA0494	-	acetyltransferase
448	 47.69	0	477642..477857	+	71	15793494	rpmE	NMA0495	-	50S ribosomal protein L31
449	 34.74	-2	478160..478801	+	213	15793495	cad	NMA0496	-	cadmium resistance protein
450	 59.57	+1	478957..480633	+	558	15793496	-	NMA0497	-	inner membrane protein
451	 54.13	0	480735..481340	+	201	15793497	regF	NMA0498	-	regulator of pilE expression
452	 57.00	0	481412..481804	+	130	15793498	regG	NMA0499	-	ClpXP protease specificity-enhancing factor
453	 49.28	0	481845..482051	+	68	15793499	-	NMA0500	-	hypothetical protein
454	 55.70	0	482129..482575	-	148	15793500	-	NMA0501	-	hypothetical protein
455	 54.46	0	482707..482919	-	70	15793501	rpsU	NMA0502	-	30S ribosomal protein S21
456	 60.29	+1	483208..485058	-	616	15793502	-	NMA0503	-	transglycosylase
457	 57.45	0	485588..486325	+	245	15793503	-	NMA0504	-	ABC transport ATP-binding subunit
458	 58.66	0	486327..487013	+	228	15793504	-	NMA0505	-	inner membrane transport protein
459	 55.67	0	487103..487966	+	287	15793505	-	NMA0506	-	lipoprotein
460	 58.25	0	488028..488597	-	189	15793506	-	NMA0507	-	aromatic acid decarboxylase
461	 56.68	0	488755..489615	+	286	15793507	-	NMA0508	-	chromosome segregation proteins
462	 50.15	0	489750..490088	+	112	15793508	-	NMA0510	-	hypothetical protein
463	 52.68	0	490197..490961	+	254	15793509	-	NMA0511	-	IS1655 transposase
464	 48.59	0	491540..491893	+	117	15793510	atpI	NMA0512	-	ATP synthase I
465	 50.63	0	491883..492749	+	288	15793511	atpB	NMA0513	-	F0F1 ATP synthase subunit A
466	 50.63	0	492806..493042	+	78	15793512	atpE	NMA0514	-	F0F1 ATP synthase subunit C
467	 51.59	0	493113..493583	+	156	15793513	atpF	NMA0515	-	F0F1 ATP synthase subunit B
468	 45.69	0	493588..494121	+	177	15793514	atpH	NMA0516	-	F0F1 ATP synthase subunit delta
469	 50.97	0	494132..495679	+	515	15793515	atpA	NMA0517	-	F0F1 ATP synthase subunit alpha
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.