IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
328	 52.94	0	338926..339078	-	50	15793374	-	NMA0366	-	hypothetical protein
329	 61.40	+1	339126..340568	+	480	15793375	tldD	NMA0367	-	TLDD protein
330	 47.84	0	340819..341280	+	153	15793376	-	NMA0368	-	integral membrane protein
331	 57.30	0	341270..342091	+	273	15793377	hemK	NMA0369	-	HemK protein
332	 58.46	0	342177..343565	+	462	15793378	-	NMA0370	-	integral membrane protein
333	 55.56	0	343566..343790	+	74	15793379	slyX	NMA0371	-	hypothetical protein
334	 48.37	0	343870..344022	-	50	15793380	-	NMA0372	-	hypothetical protein
335	 61.35	+1	344185..344955	-	256	15793381	thiF	NMA0373	-	ThiF protein
336	 56.90	0	345121..347823	+	900	161353795	ppc	NMA0374	-	phosphoenolpyruvate carboxylase
337	 56.26	0	347946..348935	+	329	15793383	gpsA	NMA0375	-	glycerol-3-phosphate dehydrogenase
338	 51.21	0	348990..349319	+	109	15793384	-	NMA0376	-	hypothetical protein
339	 55.23	0	349330..349635	+	101	15793385	-	NMA0377	-	hypothetical protein
340	 51.16	0	349998..350429	+	143	15793386	rplM	NMA0378	-	50S ribosomal protein L13
341	 52.93	0	350439..350831	+	130	15793387	rpsI	NMA0379	-	30S ribosomal protein S9
342	 35.00	-2	350831..350950	+	39	15793388	-	NMA0380	-	hypothetical protein
343	 54.41	0	351086..352015	-	309	15793389	metR	NMA0381	-	transcriptional activator protein METR
344	 51.87	0	352146..352895	+	249	15793390	-	NMA0382	-	hypothetical protein
345	 56.36	0	353018..353599	+	193	15793391	petA	NMA0383	-	ubiquinol-cytochrome c reductase iron-sulfur subunit
346	 50.89	0	353618..354967	+	449	15793392	petB	NMA0384	-	cytochrome B
347	 48.80	0	354982..355770	+	262	15793393	petC	NMA0385	-	cytochrome C1 precursor
348	 53.56	0	356109..357893	+	594	15793394	-	NMA0386	-	periplasmic protein
349	 56.40	0	358099..358731	-	210	15793395	-	NMA0387	-	hydrolase
350	 57.45	0	358822..359646	+	274	15793396	-	NMA0388	-	DNA ligase
351	 55.14	0	359715..360278	+	187	15793397	hpt	NMA0389	-	hypoxanthine-guanine phosphoribosyltransferase
352	 57.76	0	360359..360796	+	145	15793398	-	NMA0390	-	sugar transport PTS system IIA component
353	 56.67	0	360865..361134	+	89	15793399	ptsH	NMA0391	-	sugar transport PTS system phosphocarrier protein HPr
354	 57.77	0	361134..362909	+	591	15793400	ptsI	NMA0392	-	phosphoenolpyruvate-protein phosphotransferase
355	 57.61	0	363353..364291	-	312	15793401	-	NMA0393	-	ABC-transport system ATP-binding protein
356	 58.22	0	364300..365175	-	291	15793402	-	NMA0394	-	hypothetical protein
357	 54.76	0	365227..365352	+	41	15793403	-	NMA0395	-	hypothetical protein
358	 33.33	-2	365494..365586	-	30	15793404	-	NMA0396	-	hypothetical protein
359	 56.52	0	365773..367674	+	633	15793405	thiC	NMA0397	-	thiamine biosynthesis protein ThiC
360	 51.92	0	369454..370443	-	329	15793406	porB	NMA0398	-	porin, major outer membrane protein P.I
361	 48.11	0	371688..372005	-	105	15793407	chpA	NMA0400	-	PEMK-like protein
362	 45.00	0	371999..372238	-	79	15793408	-	NMA0401	-	hypothetical protein
363	 60.53	+1	372361..373158	-	265	15793409	truA	NMA0402	-	tRNA pseudouridine synthase A
364	 60.46	+1	374566..375258	-	230	15793410	-	NMA0403	-	hypothetical protein
365	 55.91	0	375255..375998	-	247	15793411	nlaB	NMA0404	-	1-acyl-SN-glycerol-3-phosphate acyltransferase
366	 55.85	0	376027..376590	-	187	15793412	-	NMA0405	-	D,D-heptose 1,7-bisphosphate phosphatase
367	 53.96	0	377328..378980	+	550	15793413	-	NMA0408	-	integral membrane protein
368	 56.92	0	379050..380291	-	413	15793414	-	NMA0409	-	amino-acid transport protein
369	 55.37	0	380455..381171	+	238	15793415	ubiG	NMA0410	-	3-demethylubiquinone-9 3-methyltransferase
370	 54.76	0	381201..382124	+	307	15793416	thrB	NMA0411	-	homoserine kinase
371	 58.19	0	382463..382981	-	172	15793417	-	NMA0412	-	glucokinase
372	 60.03	+1	383001..384386	-	461	15793418	gntP	NMA0413	-	gluconate permease
373	 61.27	+1	384727..386319	+	530	15793419	-	NMA0414	-	permease
374	 55.67	0	386348..386947	+	199	15793420	-	NMA0415	-	hypothetical protein
375	 59.26	+1	386944..387537	+	197	15793421	-	NMA0416	-	hypothetical protein
376	 55.56	0	387596..387982	+	128	15793422	-	NMA0417	-	hypothetical protein
377	 60.30	+1	388036..388506	+	156	15793423	-	NMA0418	-	SPOUT methyltransferase superfamily protein
378	 55.06	0	388579..388845	+	88	15793424	-	NMA0419	-	hypothetical protein
379	 54.39	0	389002..389685	+	227	15793425	-	NMA0420	-	integral membrane protein
380	 52.83	0	389809..390321	+	170	15793426	coaD	NMA0421	-	phosphopantetheine adenylyltransferase
381	 48.27	0	390347..391009	+	220	15793427	-	NMA0422	-	psedouridine synthase
382	 54.41	0	396694..397158	+	154	15793428	-	NMA0423	-	DNA transport competence protein
383	 37.78	-1	397246..397695	+	149	15793429	-	NMA0424	-	pilin
384	 35.19	-2	397856..398125	-	89	15793430	-	NMA0425	-	hypothetical protein
385	 50.60	0	398238..398486	+	82	15793431	-	NMA0426A	-	hypothetical protein
386	 40.72	-1	398752..399807	+	351	15793432	-	NMA0427	-	modification methylase (cytosine-specific DNA methylase)
387	 37.52	-2	399821..401467	+	548	15793433	-	NMA0428	-	hypothetical protein
388	 36.64	-2	401471..401893	+	140	15793434	vsr	NMA0429	-	patch repair protein
389	 57.01	0	401916..405041	-	1041	15793435	-	NMA0430	-	DNA helicase
390	 48.86	0	405107..406381	-	424	15793436	-	NMA0431	-	inner membrane protein
391	 42.91	-1	406562..407689	-	375	15793437	-	NMA0432	-	hypothetical protein
392	 57.40	0	407790..409181	-	463	15793438	hrpA'	NMA0433	-	ATP-dependent DNA helicase
393	 61.49	+1	409371..410780	-	469	15793439	-	NMA0434	-	hypothetical protein
394	 61.51	+1	410943..412163	-	406	15793440	argJ	NMA0435	-	bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
395	 57.86	0	412230..412922	-	230	15793441	-	NMA0436	-	hypothetical protein
396	 56.81	0	412922..413266	-	114	15793442	-	NMA0437	-	hypothetical protein
397	 46.99	0	413263..413445	-	60	15793443	-	NMA0438	-	hypothetical protein
398	 52.05	0	413411..413629	-	72	15793444	-	NMA0439	-	hypothetical protein
399	 61.09	+1	413648..414490	-	280	15793445	-	NMA0440	-	hypothetical protein
400	 58.75	0	414735..415643	+	302	161353794	hslO	NMA0441	-	Hsp33-like chaperonin
401	 56.98	0	415729..417183	-	484	15793447	-	NMA0442	-	hypothetical protein
402	 60.29	+1	417417..418169	-	250	15793448	-	NMA0444	-	hydroxyacylglutathione hydrolase
403	 55.97	0	418264..422226	-	1320	15793449	purL	NMA0445	-	phosphoribosylformylglycinamidine synthase
404	 56.93	0	422690..423028	+	112	15793450	glnB	NMA0447	-	nitrogen regulatory protein P-II 1
405	 58.76	0	423084..423842	-	252	15793451	-	NMA0448	-	ABC transporter ATP-binding subunit
406	 62.20	+1	423973..424554	-	193	15793452	-	NMA0449	-	hypothetical protein
407	 55.59	0	424599..425546	-	315	15793453	-	NMA0450	-	inner membrane transport protein
408	 55.62	0	425563..426531	-	322	15793454	-	NMA0451	-	inner membrane transport protein
409	 54.04	0	426802..427767	-	321	15793455	fetB	NMA0452	-	membrane transport solute-binding protein
410	 53.52	0	428465..430609	-	714	15793456	fetA	NMA0453	-	iron-regulated outer membrane protein
411	 59.99	+1	432471..433817	-	448	15793457	trmE	NMA0454	-	tRNA modification GTPase TrmE
412	 53.85	0	433948..434103	+	51	15793458	-	NMA0455	-	hypothetical protein
413	 56.25	0	434100..434531	+	143	15793459	-	NMA0456	-	hypothetical protein
414	 51.91	0	434665..439014	+	1449	15793460	iga2	NMA0457	-	IgA-specific serine endopeptidase
415	 51.48	0	439330..440442	-	370	15793461	-	NMA0458	-	IS1106A3 transposase
416	 45.98	0	440504..441175	-	223	15793462	-	NMA0459	-	hypothetical protein
417	 53.77	0	441460..441777	+	105	15793463	-	NMA0461	-	truncated IS1106A2 transposase
418	 56.98	0	441995..444811	-	938	15793464	polA	NMA0462	-	DNA polymerase I
419	 53.25	0	444957..445463	-	168	15793465	-	NMA0463	-	S-ribosylhomocysteinase
420	 44.76	0	445485..445904	-	139	15793466	-	NMA0464	-	hypothetical protein
421	 39.13	-1	445930..446946	-	338	15793467	-	NMA0465	-	hypothetical protein
422	 53.40	0	446973..447296	-	107	15793468	cyaY	NMA0466	-	frataxin-like protein
423	 55.56	0	447367..447537	+	56	15793469	-	NMA0467	-	lipoprotein
424	 55.77	0	447548..448768	+	406	15793470	lysA	NMA0468	-	diaminopimelate decarboxylase
425	 56.05	0	448917..450452	-	511	15793471	-	NMA0470	-	sodium-dependent inner membrane transport protein
426	 47.55	0	450665..451318	-	217	15793472	-	NMA0471	-	IS1016 transposase
427	 54.64	0	451547..451837	+	96	15793473	groES	NMA0472	-	co-chaperonin GroES
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.