IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
247	 52.83	0	250476..250988	-	170	15793282	pilE	NMA0264	-	fimbrial protein precursor (pilin)
248	 55.10	0	256488..256850	-	120	15793290	pilS8	NMA0272	-	truncated pilin
249	 55.15	0	256879..257208	-	109	15793291	fbp	NMA0273	-	peptidyl-prolyl cis-trans isomerase
250	 54.93	0	257779..258732	+	317	124054302	-	NMA0274	-	glycerate dehydrogenase
251	 54.23	0	258807..260864	-	685	15793293	metG	NMA0275	-	methionyl-tRNA synthetase
252	 57.37	0	260980..262818	-	612	15793294	glmS	NMA0276	-	D-fructose-6-phosphate amidotransferase
253	 48.36	0	263100..263618	+	172	15793295	-	NMA0277	-	lipoprotein
254	 59.80	+1	264036..265361	-	441	15793296	-	NMA0279	-	membrane-bound lytic murein transglycosylase
255	 55.00	0	265572..266411	+	279	15793297	-	NMA0280	-	integral membrane protein
256	 53.73	0	266408..267574	+	388	15793298	-	NMA0281	-	hypothetical protein
257	 59.00	+1	267838..269103	+	421	15793299	-	NMA0282	-	hypothetical protein
258	 52.42	0	269175..269504	-	109	15793300	phnA	NMA0283	-	PhnA protein ortholog
259	 56.46	0	269581..270951	-	456	15793301	glmU	NMA0284	-	UDP-N-acetylglucosamine pyrophosphorylase
260	 52.75	0	271006..271278	-	90	15793302	-	NMA0285a	-	lipoprotein
261	 55.05	0	271254..271985	-	243	15793303	-	NMA0286	-	hydrolase
262	 59.38	+1	272044..273045	+	333	15793304	tbpA	NMA0287	-	thiamin-binding periplasmic protein
263	 53.71	0	273139..273987	+	282	15793305	-	NMA0288	-	integral membrane protein
264	 60.91	+1	274013..274498	+	161	15793306	-	NMA0289	-	hypothetical protein
265	 54.68	0	274600..276168	-	522	15793307	pilB	NMA0290	-	trifunctional thioredoxin/methionine sulfoxide reductase A/B protein
266	 55.77	0	276314..277579	+	421	15793308	pilA	NMA0291	-	signal recognition particle protein
267	 38.95	-1	278168..278452	+	94	15793309	-	NMA0292	-	hypothetical protein
268	 59.45	+1	283684..287799	-	1371	15793310	-	NMA0295	-	periplasmic protein
269	 58.55	0	287908..289755	-	615	15793311	-	NMA0296	-	hypothetical protein
270	 58.37	0	290320..291549	+	409	15793312	-	NMA0298	-	serine/threonine transporter SstT
271	 52.01	0	291661..293154	+	497	15793313	-	NMA0299	-	periplasmic protein
272	 46.76	0	293229..293444	-	71	15793314	-	NMA0300	-	integral membrane protein
273	 47.22	0	293437..293652	-	71	15793315	-	NMA0301	-	hypothetical protein
274	 54.54	0	293859..295202	-	447	15793316	argG	NMA0303	-	argininosuccinate synthase
275	 55.93	0	295327..296127	+	266	15793317	-	NMA0304	-	hypothetical protein
276	 57.85	0	296167..297153	+	328	15793318	-	NMA0305	-	protease
277	 27.73	-2	298657..299013	-	118	15793320	-	NMA0308	-	hypothetical protein
278	 23.19	-2	299156..299500	-	114	15793322	-	NMA0310	-	hypothetical protein
279	 28.61	-2	299659..300060	-	133	15793323	-	NMA0311	-	hypothetical protein
280	 36.71	-2	300064..300270	-	68	15793324	-	NMA0312	-	hypothetical protein
281	 47.76	0	300275..300787	-	170	15793325	mafB'	NMA0313	-	MAFB alternative C-terminus
282	 25.47	-2	300863..301180	-	105	15793326	-	NMA0314	-	hypothetical protein
283	 27.39	-2	301872..302174	-	100	15793328	-	NMA0316	-	hypothetical protein
284	 27.04	-2	302197..302466	-	89	15793329	-	NMA0317	-	hypothetical protein
285	 40.10	-1	302487..302693	-	68	15793330	-	NMA0318	-	hypothetical protein
286	 30.65	-2	303514..303885	-	123	15793332	-	NMA0320	-	hypothetical protein
287	 37.68	-1	303882..304088	-	68	15793333	-	NMA0321	-	hypothetical protein
288	 41.36	-1	304091..304252	-	53	15793334	-	NMA0322	-	hypothetical protein
289	 28.50	-2	304265..304471	-	68	15793335	-	NMA0323	-	hypothetical protein
290	 45.13	0	304481..305929	-	482	15793336	mafB	NMA0324	-	adhesin
291	 46.73	0	305969..306931	-	320	15793337	mafA	NMA0325	-	adhesin
292	 54.03	0	307114..307833	-	239	15793338	pyrH	NMA0326	-	uridylate kinase
293	 51.23	0	308156..309010	-	284	15793339	tsf	NMA0327	-	elongation factor Ts
294	 51.44	0	309139..309867	-	242	15793340	rpsB	NMA0328	-	30S ribosomal protein S2
295	 55.71	0	310068..310277	-	69	15793341	-	NMA0329	-	integral membrane protein
296	 59.11	+1	310355..310936	+	193	15793342	-	NMA0330	-	hypothetical protein
297	 55.50	0	310997..311587	+	196	15793343	-	NMA0331	-	hypothetical protein
298	 56.58	0	312124..313590	+	488	15793344	mqo	NMA0333	-	malate:quinone oxidoreductase
299	 50.27	0	313778..314338	-	186	15793345	-	NMA0335	-	adhesin component
300	 47.00	0	314390..314689	-	99	15793346	-	NMA0336	-	hypothetical protein
301	 57.44	0	314844..315623	-	259	15793347	map	NMA0337	-	methionine aminopeptidase
302	 56.73	0	315663..316256	-	197	15793348	-	NMA0338	-	periplasmic protein
303	 61.58	+1	316321..316929	-	202	15793349	-	NMA0339	-	lipoprotein
304	 57.74	0	316993..317586	-	197	15793350	gmhA	NMA0340	-	phosphoheptose isomerase
305	 52.59	0	317591..317938	-	115	15793351	-	NMA0341	-	hypothetical protein
306	 56.85	0	317991..318866	+	291	15793352	-	NMA0342	-	hypothetical protein
307	 59.75	+1	318901..319305	-	134	15793353	cybB	NMA0343	-	cytochrome B561
308	 39.51	-1	319596..320048	+	150	15793354	-	NMA0344	-	truncated IS1016 transposase
309	 35.94	-2	320047..320238	+	63	15793355	-	NMA0344A	-	truncated IS1016 transposase
310	 58.35	0	320559..321713	+	384	15793356	obgE	NMA0345	-	GTPase ObgE
311	 39.24	-1	321796..322845	+	349	15793357	-	NMA0346	-	ATP-binding protein
312	 48.43	0	322855..324954	+	699	15793358	cysS	NMA0347	-	cysteinyl-tRNA synthetase
313	 53.08	0	325037..325816	+	259	15793359	-	NMA0348	-	nuclease
314	 55.65	0	325803..326147	+	114	15793360	-	NMA0349	-	integral membrane protein
315	 58.57	0	326157..326687	+	176	15793361	-	NMA0350	-	hypothetical protein
316	 55.65	0	326780..327895	-	371	15793362	-	NMA0351	-	aspartate-semialdehyde dehydrogenase
317	 51.55	0	328071..328652	+	193	15793363	-	NMA0353	-	integral membrane protein
318	 57.43	0	328714..329568	-	284	15793364	folD	NMA0354	-	methylenetetrahydrofolate dehydrogenase/cyclohydrolase
319	 58.58	0	330283..330789	+	168	15793365	-	NMA0356	-	transferase
320	 60.37	+1	330786..332564	+	592	15793366	birA	NMA0357	-	bifunctional biotin--[acetyl-CoA-carboxylase] ligase/pantothenate kinase
321	 58.18	0	332677..333501	+	274	15793367	-	NMA0358	-	periplasmic protein
322	 45.91	0	333729..333887	+	52	15793368	-	NMA0360	-	hypothetical protein
323	 61.98	+1	334264..335052	-	262	15793369	thiG	NMA0361	-	thiazole synthase
324	 57.44	0	335266..335460	-	64	15793370	-	NMA0362	-	hypothetical protein
325	 61.97	+1	335882..336499	-	205	15793371	thiE	NMA0363	-	thiamin-phosphate pyrophosphorylase
326	 61.31	+1	336520..337620	-	366	15793372	-	NMA0364	-	oxidoreductase
327	 59.28	+1	337526..338839	-	437	15793373	-	NMA0365	-	permease
328	 52.94	0	338926..339078	-	50	15793374	-	NMA0366	-	hypothetical protein
329	 61.40	+1	339126..340568	+	480	15793375	tldD	NMA0367	-	TLDD protein
330	 47.84	0	340819..341280	+	153	15793376	-	NMA0368	-	integral membrane protein
331	 57.30	0	341270..342091	+	273	15793377	hemK	NMA0369	-	HemK protein
332	 58.46	0	342177..343565	+	462	15793378	-	NMA0370	-	integral membrane protein
333	 55.56	0	343566..343790	+	74	15793379	slyX	NMA0371	-	hypothetical protein
334	 48.37	0	343870..344022	-	50	15793380	-	NMA0372	-	hypothetical protein
335	 61.35	+1	344185..344955	-	256	15793381	thiF	NMA0373	-	ThiF protein
336	 56.90	0	345121..347823	+	900	161353795	ppc	NMA0374	-	phosphoenolpyruvate carboxylase
337	 56.26	0	347946..348935	+	329	15793383	gpsA	NMA0375	-	glycerol-3-phosphate dehydrogenase
338	 51.21	0	348990..349319	+	109	15793384	-	NMA0376	-	hypothetical protein
339	 55.23	0	349330..349635	+	101	15793385	-	NMA0377	-	hypothetical protein
340	 51.16	0	349998..350429	+	143	15793386	rplM	NMA0378	-	50S ribosomal protein L13
341	 52.93	0	350439..350831	+	130	15793387	rpsI	NMA0379	-	30S ribosomal protein S9
342	 35.00	-2	350831..350950	+	39	15793388	-	NMA0380	-	hypothetical protein
343	 54.41	0	351086..352015	-	309	15793389	metR	NMA0381	-	transcriptional activator protein METR
344	 51.87	0	352146..352895	+	249	15793390	-	NMA0382	-	hypothetical protein
345	 56.36	0	353018..353599	+	193	15793391	petA	NMA0383	-	ubiquinol-cytochrome c reductase iron-sulfur subunit
346	 50.89	0	353618..354967	+	449	15793392	petB	NMA0384	-	cytochrome B
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.