IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1951	 55.02	0	2079146..2079961	+	271	15795000	aroE	NMA2129	-	shikimate dehydrogenase
1952	 54.84	0	2079964..2080665	+	233	15795001	mtgA	NMA2130	-	monofunctional biosynthetic peptidoglycan transglycosylase
1953	 53.33	0	2081256..2082020	-	254	15795002	-	NMA2131	-	ABC transporter ATP-binding protein
1954	 53.30	0	2082064..2082594	-	176	15795003	-	NMA2132	-	hypothetical protein
1955	 48.97	0	2082575..2083156	-	193	15795004	-	NMA2133	-	hypothetical protein
1956	 57.54	0	2083153..2083689	-	178	15795005	-	NMA2134	-	hypothetical protein
1957	 59.38	+1	2083907..2084881	-	324	15795006	-	NMA2135	-	hypothetical protein
1958	 57.95	0	2084978..2086033	+	351	15795007	tal	NMA2136	-	transaldolase
1959	 36.43	-2	2086186..2086476	+	96	15795008	-	NMA2137	-	hypothetical protein
1960	 61.60	+1	2086493..2087380	+	295	15795009	-	NMA2138	-	glutamyl-Q tRNA(Asp) synthetase
1961	 59.25	+1	2087450..2088460	-	336	15795010	-	NMA2139	-	tRNA-dihydrouridine synthase A
1962	 54.47	0	2088491..2088982	-	163	15795011	-	NMA2140	-	D-tyrosyl-tRNA deacylase
1963	 53.19	0	2089056..2089775	-	239	15795012	-	NMA2141	-	hypothetical protein
1964	 51.21	0	2089885..2090751	-	288	15795013	-	NMA2142	-	hypothetical protein
1965	 58.78	0	2090800..2091078	-	92	15795014	-	NMA2143	-	hypothetical protein
1966	 55.67	0	2091078..2091368	-	96	15795015	-	NMA2144	-	YciI-like protein
1967	 48.40	0	2091371..2091901	-	176	15795016	-	NMA2145	-	morphogene
1968	 55.16	0	2092107..2094749	+	880	15795017	tspA	NMA2146	-	antigen protein TspA
1969	 53.00	0	2094922..2095338	-	138	15795018	gloA	NMA2147	-	lactoylglutathione lyase
1970	 52.99	0	2095362..2096531	-	389	15795019	-	NMA2148	-	hypothetical protein
1971	 51.11	0	2096542..2096856	-	104	15795020	-	NMA2149	-	hypothetical protein
1972	 44.07	-1	2096959..2097135	+	58	15795021	-	NMA2150	-	hypothetical protein
1973	 56.96	0	2097166..2098164	+	332	15795022	ilvE	NMA2151	-	branched-chain amino acid aminotransferase
1974	 57.38	0	2098349..2099134	-	261	15795023	fabI	NMA2152	-	enoyl-(acyl carrier protein) reductase
1975	 56.33	0	2099289..2100110	-	273	15795024	dapD	NMA2153	-	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
1976	 59.06	+1	2100277..2101920	-	547	15795025	pgi2	NMA2154	-	glucose-6-phosphate isomerase 2
1977	 52.88	0	2102277..2103509	+	410	15795026	pilG	NMA2155	-	pilus-assembly protein
1978	 53.31	0	2103583..2104443	+	286	15795027	pilD	NMA2156	-	type IV prepilin leader peptidase
1979	 55.77	0	2104445..2105077	+	210	15795028	-	NMA2157	-	hypothetical protein
1980	 53.33	0	2105070..2105279	+	69	15795029	-	NMA2158	-	hypothetical protein
1981	 52.77	0	2105364..2107040	-	558	15795030	pilF	NMA2159	-	type IV pilus assembly protein
1982	 50.11	0	2107484..2107930	-	148	15795031	-	NMA2160	-	hypothetical protein
1983	 51.49	0	2107935..2108909	-	324	15795032	-	NMA2161	-	octaprenyl-diphosphate synthase
1984	 48.22	0	2109133..2109441	+	102	15795033	rplU	NMA2162	-	50S ribosomal protein L21
1985	 52.01	0	2109466..2109738	+	90	15795034	rpmA	NMA2163	-	50S ribosomal protein L27
1986	 52.91	0	2110077..2111261	+	394	15795035	-	NMA2164	-	hypothetical protein
1987	 40.38	-1	2111532..2111687	-	51	15795036	rpmG	NMA2165	-	50S ribosomal protein L33
1988	 52.14	0	2111719..2111952	-	77	15795037	rpmB	NMA2166	-	50S ribosomal protein L28
1989	 45.50	0	2112024..2112212	-	62	15795038	-	NMA2167	-	hypothetical protein
1990	 53.90	0	2112202..2113752	-	516	15795039	emrB	NMA2168	-	multidrug resistance translocase
1991	 59.92	+1	2113752..2114936	-	394	15795040	emrA	NMA2169	-	multidrug resistance translocase
1992	 51.69	0	2115348..2115821	+	157	15795041	-	NMA2170	-	7-cyano-7-deazaguanine reductase
1993	 53.86	0	2115898..2116584	+	228	15795042	-	NMA2171	-	hypothetical protein
1994	 60.71	+1	2117120..2118412	-	430	15795043	-	NMA2172	-	hypothetical protein
1995	 59.13	+1	2118490..2119458	+	322	15795044	-	NMA2173	-	hypothetical protein
1996	 55.33	0	2119659..2121131	-	490	15795045	-	NMA2174	-	hypothetical protein
1997	 51.24	0	2121367..2123226	-	619	15795046	vapA	NMA2175	-	virulence associated protein
1998	 48.78	0	2124655..2124900	-	81	15795047	-	NMA2176	-	hypothetical protein
1999	 55.25	0	2125003..2125440	+	145	15795048	-	NMA2177	-	hypothetical protein
2000	 51.57	0	2125452..2125928	+	158	15795049	-	NMA2178	-	hypothetical protein
2001	 55.01	0	2126278..2126766	-	162	15795050	folA	NMA2179	-	dihydrofolate reductase
2002	 52.94	0	2126834..2127889	-	351	15795051	aroG	NMA2180	-	phospho-2-dehydro-3-deoxyheptonate aldolase
2003	 34.15	-2	2127943..2128308	+	121	15795052	-	NMA2181	-	hypothetical protein
2004	 51.61	0	2128354..2128446	+	30	15795053	-	NMA2182	-	hypothetical protein
2005	 47.71	0	2129169..2129822	-	217	15795055	-	NMA2185	-	IS1016C2 transposase
2006	 45.97	0	2129942..2130400	-	152	15795056	-	NMA2186	-	hypothetical protein
2007	 54.62	0	2130512..2130976	-	154	15795057	-	NMA2187	-	DNA transport competence protein
2008	 43.39	-1	2136460..2136648	+	62	15795058	-	NMA2188	-	hypothetical protein
2009	 51.30	0	2136776..2137582	-	268	15795059	-	NMA2189	-	hypothetical protein
2010	 52.15	0	2137803..2139173	+	456	15795060	ffh	NMA2190	-	signal recognition particle protein
2011	 48.99	0	2139504..2140199	-	231	15795061	-	NMA2191	-	thiol:disulphide interchange protein
2012	 39.24	-1	2140370..2141029	-	219	15795062	-	NMA2192	-	hypothetical protein
2013	 53.69	0	2141227..2143338	-	703	15795063	-	NMA2193	-	TonB-dependent receptor protein
2014	 51.82	0	2143524..2144129	-	201	15795064	-	NMA2195	-	hypothetical protein
2015	 55.64	0	2144178..2144576	-	132	15795065	-	NMA2196	-	hypothetical protein
2016	 60.09	+1	2144684..2145595	+	303	15795066	-	NMA2197	-	LysR family transcriptional regulator
2017	 62.52	+1	2145585..2146886	+	433	15795067	phr	NMA2198	-	deoxyribodopyrimidine photolyase
2018	 52.32	0	2146954..2147190	-	78	15795068	-	NMA2199a	-	hypothetical protein
2019	 57.28	0	2147279..2149429	+	716	15795069	dinG	NMA2200	-	ATP-dependent DNA helicase DinG
2020	 57.24	0	2149465..2150079	+	204	15795070	-	NMA2201	-	hypothetical protein
2021	 49.87	0	2150174..2152042	-	622	15795071	-	NMA2202	-	inner membrane trans-acylase protein
2022	 56.02	0	2152123..2153493	-	456	15795072	purB	NMA2203	-	adenylosuccinate lyase
2023	 58.93	+1	2153565..2154197	-	210	15795073	-	NMA2204	-	hypothetical protein
2024	 54.09	0	2154479..2156386	+	635	15795074	-	NMA2205a	-	hypothetical protein
2025	 58.81	0	2157620..2158663	-	347	15795075	-	NMA2206	-	rotamase
2026	 59.44	+1	2158786..2161194	-	802	15795076	-	NMA2207	-	solvent tolerance protein
2027	 54.93	0	2161264..2162268	+	334	15795077	-	NMA2208	-	hypothetical protein
2028	 56.08	0	2162325..2163023	-	232	15795078	-	NMA2209	-	thiol:disulphide interchange protein
2029	 54.52	0	2163482..2165020	+	512	15795079	-	NMA2210	-	inner membrane virulence factor protein
2030	 61.23	+1	2165153..2166109	+	318	15795080	-	NMA2211	-	hypothetical protein
2031	 57.47	0	2166160..2166942	+	260	15795081	trpC	NMA2212	-	indole-3-glycerol-phosphate synthase
2032	 57.02	0	2167007..2169307	+	766	15795082	recQ	NMA2213	-	ATP-dependent DNA helicase
2033	 50.40	0	2169450..2170076	-	208	15795083	-	NMA2214	-	hypothetical protein
2034	 57.96	0	2170152..2170748	-	198	15795084	-	NMA2215	-	hypothetical protein
2035	 60.49	+1	2170774..2171712	-	312	15795085	-	NMA2216	-	hydrolase
2036	 57.71	0	2171684..2172409	+	241	15795086	-	NMA2217	-	hypothetical protein
2037	 59.14	+1	2172474..2172938	+	154	15795087	-	NMA2218	-	tRNA/rRNA methyltransferase
2038	 56.67	0	2173066..2173785	+	239	15795088	-	NMA2219	-	periplasmic protein
2039	 57.74	0	2173785..2174165	+	126	15795089	-	NMA2220	-	hypothetical protein
2040	 57.26	0	2174247..2174831	+	194	15795090	ruvA	NMA2221	-	Holliday junction DNA helicase motor protein
2041	 57.97	0	2174831..2174968	+	45	15795091	-	NMA2222	-	hypothetical protein
2042	 59.45	+1	2174994..2176850	+	618	15795092	-	NMA2223	-	ABC transporter
2043	 61.47	+1	2176855..2177778	+	307	15795093	-	NMA2224	-	ribosome-associated GTPase
2044	 51.56	0	2178042..2178266	+	74	15795094	xseB	NMA2225	-	exodeoxyribonuclease small subunit
2045	 57.64	0	2178250..2179146	+	298	15795095	ispA	NMA2226	-	geranyltranstransferase
2046	 56.41	0	2179255..2179605	-	116	15795096	-	NMA2227	-	hypothetical protein
2047	 55.39	0	2179666..2181111	-	481	15795097	nuoN	NMA2228	-	NADH dehydrogenase subunit N
2048	 50.84	0	2181121..2182617	-	498	15795098	nuoM	NMA2229	-	NADH dehydrogenase subunit M
2049	 37.24	-2	2182654..2184369	-	571	15795099	-	NMA2230	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.