IslandPathversion 1.0

IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 51.77 STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1819	 55.35	0	1923905..1924567	-	220	15794866	exbB	NMA1984	-	biopolymer transport protein
1820	 56.11	0	1924633..1925475	-	280	15794867	tonB	NMA1985	-	TonB protein
1821	 55.87	0	1925730..1926368	+	212	15794868	-	NMA1986	-	hypothetical protein
1822	 36.97	-2	1926572..1926901	+	109	15794869	-	NMA1987	-	hypothetical protein
1823	 37.45	-2	1926820..1927620	-	266	15794870	-	NMA1988	-	integral membrane protein
1824	 30.25	-2	1927756..1928274	-	172	15794871	-	NMA1989	-	hypothetical protein
1825	 51.71	0	1928596..1929237	-	213	15794872	grxB	NMA1990	-	glutaredoxin 2
1826	 56.58	0	1929458..1931767	+	769	15794873	relA	NMA1991	-	GTP pyrophosphokinase
1827	 52.35	0	1933011..1934414	-	467	15794874	natC	NMA1994	-	periplasmic type I secretion system protein
1828	 50.25	0	1934483..1934683	-	66	15794875	natD'	NMA1995	-	periplasmic type I secretion system protein
1829	 45.39	0	1936559..1936840	+	93	15794877	-	NMA1997	-	hypothetical protein
1830	 44.91	0	1936911..1937126	+	71	15794878	-	NMA1998	-	hypothetical protein
1831	 45.99	0	1937519..1938553	+	344	15794879	-	NMA1999	-	hypothetical protein
1832	 47.54	0	1938544..1938888	+	114	15794880	-	NMA2000	-	hypothetical protein
1833	 42.42	-1	1938893..1939090	+	65	15794881	-	NMA2001	-	hypothetical protein
1834	 47.37	0	1939098..1939382	+	94	15794882	-	NMA2002	-	hypothetical protein
1835	 45.88	0	1939389..1939667	+	92	15794883	-	NMA2003	-	hypothetical protein
1836	 32.73	-2	1939780..1940112	+	110	15794884	-	NMA2004	-	hypothetical protein
1837	 45.45	0	1940096..1940491	+	131	15794885	-	NMA2005	-	cell-surface protein
1838	 46.67	0	1941209..1941568	-	119	15794886	-	NMA2006	-	hypothetical protein
1839	 48.68	0	1941591..1942235	-	214	15794887	-	NMA2007	-	hypothetical protein
1840	 44.32	-1	1942237..1942773	-	178	15794888	-	NMA2008	-	hypothetical protein
1841	 47.09	0	1942785..1943882	-	365	15794889	-	NMA2009	-	hypothetical protein
1842	 49.71	0	1943885..1945276	-	463	15794890	-	NMA2010	-	hypothetical protein
1843	 42.02	-1	1945541..1946323	-	260	15794891	-	NMA2011	-	hypothetical protein
1844	 44.29	-1	1946311..1946958	-	215	15794892	-	NMA2012	-	hypothetical protein
1845	 44.09	-1	1946968..1948110	-	380	15794893	bioF	NMA2013	-	8-amino-7-oxononanoate synthase
1846	 53.30	0	1948333..1949409	+	358	15794894	-	NMA2014	-	hypothetical protein
1847	 50.37	0	1949616..1951082	-	488	15794895	-	NMA2015	-	integral membrane transport protein
1848	 52.92	0	1951280..1952203	-	307	15794896	speB	NMA2016	-	agmatinase
1849	 49.76	0	1952302..1954194	-	630	15794897	speA	NMA2017	-	arginine decarboxylase
1850	 49.82	0	1954361..1954645	-	94	15794898	-	NMA2018	-	hypothetical protein
1851	 54.01	0	1954796..1956604	-	602	15794899	aspS	NMA2019	-	aspartyl-tRNA synthetase
1852	 51.76	0	1956662..1957399	-	245	15794900	-	NMA2020	-	integral membrane protein
1853	 53.98	0	1957506..1958735	-	409	15794901	-	NMA2021	-	phopholipase
1854	 53.79	0	1958814..1959077	-	87	15794902	rpsT	NMA2022	-	30S ribosomal protein S20
1855	 53.37	0	1959380..1960522	+	380	15794903	-	NMA2023	-	polyamine permease substrate-binding protein
1856	 53.93	0	1962649..1965381	-	910	15794904	tbpA	NMA2024	-	transferrin-binding protein A
1857	 46.35	0	1965468..1967564	-	698	15794905	tbpB	NMA2025	-	transferrin-binding protein B
1858	 54.00	0	1969683..1970495	-	270	15794906	glr	NMA2026	-	glutamate racemase
1859	 58.66	0	1970697..1971158	+	153	15794907	-	NMA2027	-	hypothetical protein
1860	 59.63	+1	1971155..1972405	+	416	15794908	amiC	NMA2028	-	N-acetylmuramoyl-L-alanine amidase
1861	 45.02	0	1972431..1973303	+	290	15794909	-	NMA2029	-	hypothetical protein
1862	 56.17	0	1973599..1974741	-	380	15794910	-	NMA2030	-	hypothetical protein
1863	 55.56	0	1974790..1975212	-	140	15794911	-	NMA2031	-	secreted protein
1864	 59.51	+1	1975205..1976014	-	269	15794912	-	NMA2032	-	MutT-related protein
1865	 56.35	0	1976091..1976468	-	125	15794913	acpS	NMA2033	-	holo-(acyl-carrier protein) synthase
1866	 42.36	-1	1976465..1976608	-	47	15794914	-	NMA2034	-	hypothetical protein
1867	 35.16	-2	1976669..1977436	-	255	15794915	-	NMA2035	-	hypothetical protein
1868	 30.77	-2	1977446..1978225	-	259	15794916	-	NMA2036	-	hypothetical protein
1869	 58.30	0	1978272..1979000	-	242	15794917	pdxJ	NMA2037	-	pyridoxal phosphate biosynthetic protein PdxJ
1870	 60.75	+1	1979024..1979818	-	264	15794918	recO	NMA2038	-	DNA repair protein (recombination protein o)
1871	 59.93	+1	1979849..1980976	-	375	15794919	pheA	NMA2039	-	chorismate mutase
1872	 57.10	0	1981015..1982247	-	410	15794920	-	NMA2040	-	integral membrane efflux protein
1873	 58.36	0	1982766..1983620	-	284	15794921	-	NMA2041	-	hypothetical protein
1874	 61.13	+1	1987822..1988634	-	270	15794922	-	NMA2044	-	hypothetical protein
1875	 60.71	+1	1988719..1989591	+	290	15794923	-	NMA2045	-	oxidoreductase
1876	 57.19	0	1989648..1990850	-	400	15794924	-	NMA2046	-	hypothetical protein
1877	 55.83	0	1990847..1991215	-	122	15794925	-	NMA2047	-	hypothetical protein
1878	 57.21	0	1991389..1991832	+	147	15794926	-	NMA2048	-	hypothetical protein
1879	 55.39	0	1991959..1992579	-	206	15794927	-	NMA2049	-	hypothetical protein
1880	 55.92	0	1992937..1994136	-	399	15794928	ackA2	NMA2050	-	acetate kinase
1881	 57.01	0	1994550..1995719	-	389	15794929	-	NMA2051	-	hypothetical protein
1882	 56.23	0	1996523..1999129	-	868	15794930	acnA	NMA2052	-	aconitate hydratase
1883	 49.43	0	1999207..1999995	-	262	15794931	-	NMA2053	-	hypothetical protein
1884	 52.12	0	2000156..2001310	-	384	15794932	prpC	NMA2054	-	methylcitrate synthase
1885	 53.47	0	2001396..2002274	-	292	15794933	prpB	NMA2055	-	2-methylisocitrate lyase
1886	 52.86	0	2002897..2004207	-	436	15794934	-	NMA2056	-	hypothetical protein
1887	 54.11	0	2004346..2005524	-	392	15794935	ftsZ	NMA2057	-	cell division protein FtsZ
1888	 53.09	0	2005643..2006887	-	414	15794936	ftsA	NMA2058	-	cell division protein
1889	 53.22	0	2006973..2007701	-	242	15794937	ftsQ	NMA2059	-	cell division protein
1890	 52.68	0	2007691..2008605	-	304	15794938	ddl	NMA2060	-	D-alanine--D-alanine ligase
1891	 55.96	0	2008718..2010127	-	469	161353788	murC	NMA2061	-	UDP-N-acetylmuramate--L-alanine ligase
1892	 59.46	+1	2010282..2011349	-	355	15794940	murG	NMA2062	-	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
1893	 53.36	0	2011353..2012660	-	435	15794941	ftsW	NMA2063	-	cell division protein
1894	 56.80	0	2012804..2014141	-	445	15794942	murD	NMA2064	-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
1895	 54.95	0	2014226..2014498	-	90	15794943	-	NMA2065	-	periplasmic protein
1896	 54.66	0	2014613..2015695	-	360	15794944	mraY	NMA2066	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
1897	 45.90	0	2015789..2015971	-	60	15794945	-	NMA2067	-	periplasmic protein
1898	 55.26	0	2015968..2017326	-	452	15794946	murF	NMA2068	-	UDP-MurNAc-pentapeptide synthetase
1899	 56.66	0	2019121..2020599	-	492	15794947	murE	NMA2071	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
1900	 54.75	0	2020624..2022369	-	581	15794948	penA	NMA2072	-	penicillin-binding protein 2
1901	 49.63	0	2022430..2022699	-	89	15794949	-	NMA2073	-	small periplasmic protein
1902	 57.55	0	2022690..2023676	-	328	15794950	mraW	NMA2074	-	S-adenosyl-methyltransferase MraW
1903	 53.73	0	2023673..2024128	-	151	15794951	-	NMA2075	-	cell division protein MraZ
1904	 50.08	0	2024407..2025624	+	405	15794952	-	NMA2076	-	hypothetical protein
1905	 46.35	0	2026199..2027020	-	273	15794953	-	NMA2077	-	integral membrane antobiotic resistance protein
1906	 48.99	0	2027053..2027697	-	214	15794954	-	NMA2078	-	thiol:disulphide interchange protein
1907	 50.80	0	2027700..2028569	-	289	15794955	-	NMA2079	-	hypothetical protein
1908	 59.65	+1	2028669..2030165	-	498	15794956	-	NMA2080	-	chelatase
1909	 50.56	0	2030179..2030532	-	117	15794957	-	NMA2081	-	hypothetical protein
1910	 55.60	0	2030982..2032508	+	508	15794958	putP	NMA2083	-	sodium/proline symporter
1911	 59.35	+1	2032759..2036364	+	1201	161353787	putA	NMA2084	-	bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
1912	 51.72	0	2037591..2038172	-	193	15794960	-	NMA2085	-	putative transposase
1913	 56.55	0	2039124..2039894	-	256	15794961	xthA	NMA2086	-	exodeoxyribonuclease III
1914	 55.56	0	2039954..2040160	-	68	15794962	-	NMA2087	-	transcriptional regulator
1915	 61.56	+1	2040486..2041367	-	293	15794963	nadC	NMA2088	-	nicotinate-nucleotide pyrophosphorylase
1916	 60.92	+1	2041596..2042534	-	312	15794964	-	NMA2089	-	cytoplasmic membrane protein
1917	 58.49	0	2042839..2043951	+	370	15794965	nadA	NMA2090	-	quinolinate synthetase
1918	 48.81	0	2044102..2044437	+	111	15794966	-	NMA2091	-	integral membrane drug resistance protein
51.77	MEAN

7.09	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.