IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1781	 58.40	0	1878816..1879892	-	358	15794828	prfA	NMA1945	-	peptide chain release factor 1
1782	 55.79	0	1879996..1880850	-	284	15794829	-	NMA1946	-	hypothetical protein
1783	 58.59	0	1880890..1881879	-	329	15794830	ans	NMA1947	-	L-asparaginase
1784	 53.18	0	1881946..1882731	-	261	15794831	-	NMA1948	-	DedA family integral membrane protein
1785	 56.78	0	1882819..1884153	-	444	15794832	-	NMA1949	-	phosphoglucomutase/phosphomannomutase
1786	 58.33	0	1884283..1885134	-	283	15794833	dhpS	NMA1950	-	dihydropteroate synthase
1787	 54.57	0	1885301..1887523	+	740	15794834	-	NMA1951	-	hypothetical protein
1788	 56.46	0	1887587..1889065	-	492	15794835	-	NMA1952	-	hypothetical protein
1789	 50.78	0	1889085..1889600	-	171	15794836	-	NMA1953	-	hypothetical protein
1790	 55.17	0	1889607..1890041	-	144	15794837	-	NMA1954	-	integral membrane protein
1791	 58.39	0	1890339..1890773	-	144	15794838	-	NMA1955	-	hypothetical protein
1792	 47.09	0	1890948..1891616	+	222	15794839	-	NMA1956	-	IS1016 transposase
1793	 59.72	+1	1891823..1892959	+	378	15794840	fabF2	NMA1957	-	3-oxoacyl-(acyl carrier protein) synthase II
1794	 44.71	0	1893157..1893921	+	254	15794841	lgtF	NMA1958	-	beta-1,4-glucosyltransferase
1795	 47.04	0	1893922..1894986	+	354	15794842	rfaK	NMA1959	-	alpha 1,2 N-acetylglucosamine transferase
1796	 42.69	-1	1895025..1895195	+	56	15794843	-	NMA1960	-	hypothetical protein
1797	 51.79	0	1895373..1896710	+	445	15794844	-	NMA1961	-	integral membrane ion transporter
1798	 53.94	0	1896882..1897541	-	219	15794845	-	NMA1962	-	hypothetical protein
1799	 53.08	0	1897550..1898344	-	264	15794846	thyA	NMA1963	-	thymidylate synthase
1800	 56.18	0	1898767..1900101	+	444	15794847	gdhA	NMA1964	-	glutamate dehydrogenase
1801	 53.90	0	1900390..1901172	-	260	15794848	-	NMA1965	-	GntR family transcriptional regulator
1802	 53.00	0	1901600..1901899	+	99	15794849	-	NMA1966	-	integral membrane protein
1803	 50.00	0	1901926..1902075	+	49	15794850	-	NMA1967	-	hypothetical protein
1804	 56.13	0	1902277..1903680	-	467	15794851	mtrE	NMA1968	-	outer membrane lipoprotein
1805	 54.06	0	1903735..1906938	-	1067	15794852	mtrD	NMA1969	-	drug efflux protein
1806	 58.27	0	1906950..1908188	-	412	15794853	mtrC	NMA1970	-	membrane fusion protein
1807	 51.50	0	1908596..1909228	+	210	15794854	mtrR	NMA1971	-	transcriptional regulato
1808	 29.46	-2	1909507..1909764	-	85	15794855	-	NMA1972	-	hypothetical protein
1809	 48.31	0	1910053..1911621	+	522	15794856	-	NMA1973	-	hypothetical protein
1810	 55.76	0	1911691..1914900	-	1069	15794857	recC	NMA1974	-	exodeoxyribonuclease V
1811	 54.04	0	1915001..1916410	-	469	15794858	-	NMA1975	-	integral membrane protein
1812	 50.73	0	1916846..1917943	-	365	15794859	-	NMA1977	-	cytochrome c
1813	 38.60	-1	1917967..1918137	-	56	15794860	-	NMA1978	-	hypothetical protein
1814	 51.96	0	1918142..1918753	-	203	15794861	-	NMA1979	-	cytochrome oxidase subunit
1815	 51.38	0	1918780..1920225	-	481	15794862	-	NMA1980	-	cytochrome c oxidase subunit
1816	 51.42	0	1920531..1922288	+	585	15794863	-	NMA1981	-	hypothetical protein
1817	 55.34	0	1922314..1922781	+	155	15794864	-	NMA1982	-	hypothetical protein
1818	 51.72	0	1923468..1923902	-	144	15794865	exbD	NMA1983	-	biopolymer transport protein
1819	 55.35	0	1923905..1924567	-	220	15794866	exbB	NMA1984	-	biopolymer transport protein
1820	 56.11	0	1924633..1925475	-	280	15794867	tonB	NMA1985	-	TonB protein
1821	 55.87	0	1925730..1926368	+	212	15794868	-	NMA1986	-	hypothetical protein
1822	 36.97	-2	1926572..1926901	+	109	15794869	-	NMA1987	-	hypothetical protein
1823	 37.45	-2	1926820..1927620	-	266	15794870	-	NMA1988	-	integral membrane protein
1824	 30.25	-2	1927756..1928274	-	172	15794871	-	NMA1989	-	hypothetical protein
1825	 51.71	0	1928596..1929237	-	213	15794872	grxB	NMA1990	-	glutaredoxin 2
1826	 56.58	0	1929458..1931767	+	769	15794873	relA	NMA1991	-	GTP pyrophosphokinase
1827	 52.35	0	1933011..1934414	-	467	15794874	natC	NMA1994	-	periplasmic type I secretion system protein
1828	 50.25	0	1934483..1934683	-	66	15794875	natD'	NMA1995	-	periplasmic type I secretion system protein
1829	 45.39	0	1936559..1936840	+	93	15794877	-	NMA1997	-	hypothetical protein
1830	 44.91	0	1936911..1937126	+	71	15794878	-	NMA1998	-	hypothetical protein
1831	 45.99	0	1937519..1938553	+	344	15794879	-	NMA1999	-	hypothetical protein
1832	 47.54	0	1938544..1938888	+	114	15794880	-	NMA2000	-	hypothetical protein
1833	 42.42	-1	1938893..1939090	+	65	15794881	-	NMA2001	-	hypothetical protein
1834	 47.37	0	1939098..1939382	+	94	15794882	-	NMA2002	-	hypothetical protein
1835	 45.88	0	1939389..1939667	+	92	15794883	-	NMA2003	-	hypothetical protein
1836	 32.73	-2	1939780..1940112	+	110	15794884	-	NMA2004	-	hypothetical protein
1837	 45.45	0	1940096..1940491	+	131	15794885	-	NMA2005	-	cell-surface protein
1838	 46.67	0	1941209..1941568	-	119	15794886	-	NMA2006	-	hypothetical protein
1839	 48.68	0	1941591..1942235	-	214	15794887	-	NMA2007	-	hypothetical protein
1840	 44.32	-1	1942237..1942773	-	178	15794888	-	NMA2008	-	hypothetical protein
1841	 47.09	0	1942785..1943882	-	365	15794889	-	NMA2009	-	hypothetical protein
1842	 49.71	0	1943885..1945276	-	463	15794890	-	NMA2010	-	hypothetical protein
1843	 42.02	-1	1945541..1946323	-	260	15794891	-	NMA2011	-	hypothetical protein
1844	 44.29	-1	1946311..1946958	-	215	15794892	-	NMA2012	-	hypothetical protein
1845	 44.09	-1	1946968..1948110	-	380	15794893	bioF	NMA2013	-	8-amino-7-oxononanoate synthase
1846	 53.30	0	1948333..1949409	+	358	15794894	-	NMA2014	-	hypothetical protein
1847	 50.37	0	1949616..1951082	-	488	15794895	-	NMA2015	-	integral membrane transport protein
1848	 52.92	0	1951280..1952203	-	307	15794896	speB	NMA2016	-	agmatinase
1849	 49.76	0	1952302..1954194	-	630	15794897	speA	NMA2017	-	arginine decarboxylase
1850	 49.82	0	1954361..1954645	-	94	15794898	-	NMA2018	-	hypothetical protein
1851	 54.01	0	1954796..1956604	-	602	15794899	aspS	NMA2019	-	aspartyl-tRNA synthetase
1852	 51.76	0	1956662..1957399	-	245	15794900	-	NMA2020	-	integral membrane protein
1853	 53.98	0	1957506..1958735	-	409	15794901	-	NMA2021	-	phopholipase
1854	 53.79	0	1958814..1959077	-	87	15794902	rpsT	NMA2022	-	30S ribosomal protein S20
1855	 53.37	0	1959380..1960522	+	380	15794903	-	NMA2023	-	polyamine permease substrate-binding protein
1856	 53.93	0	1962649..1965381	-	910	15794904	tbpA	NMA2024	-	transferrin-binding protein A
1857	 46.35	0	1965468..1967564	-	698	15794905	tbpB	NMA2025	-	transferrin-binding protein B
1858	 54.00	0	1969683..1970495	-	270	15794906	glr	NMA2026	-	glutamate racemase
1859	 58.66	0	1970697..1971158	+	153	15794907	-	NMA2027	-	hypothetical protein
1860	 59.63	+1	1971155..1972405	+	416	15794908	amiC	NMA2028	-	N-acetylmuramoyl-L-alanine amidase
1861	 45.02	0	1972431..1973303	+	290	15794909	-	NMA2029	-	hypothetical protein
1862	 56.17	0	1973599..1974741	-	380	15794910	-	NMA2030	-	hypothetical protein
1863	 55.56	0	1974790..1975212	-	140	15794911	-	NMA2031	-	secreted protein
1864	 59.51	+1	1975205..1976014	-	269	15794912	-	NMA2032	-	MutT-related protein
1865	 56.35	0	1976091..1976468	-	125	15794913	acpS	NMA2033	-	holo-(acyl-carrier protein) synthase
1866	 42.36	-1	1976465..1976608	-	47	15794914	-	NMA2034	-	hypothetical protein
1867	 35.16	-2	1976669..1977436	-	255	15794915	-	NMA2035	-	hypothetical protein
1868	 30.77	-2	1977446..1978225	-	259	15794916	-	NMA2036	-	hypothetical protein
1869	 58.30	0	1978272..1979000	-	242	15794917	pdxJ	NMA2037	-	pyridoxal phosphate biosynthetic protein PdxJ
1870	 60.75	+1	1979024..1979818	-	264	15794918	recO	NMA2038	-	DNA repair protein (recombination protein o)
1871	 59.93	+1	1979849..1980976	-	375	15794919	pheA	NMA2039	-	chorismate mutase
1872	 57.10	0	1981015..1982247	-	410	15794920	-	NMA2040	-	integral membrane efflux protein
1873	 58.36	0	1982766..1983620	-	284	15794921	-	NMA2041	-	hypothetical protein
1874	 61.13	+1	1987822..1988634	-	270	15794922	-	NMA2044	-	hypothetical protein
1875	 60.71	+1	1988719..1989591	+	290	15794923	-	NMA2045	-	oxidoreductase
1876	 57.19	0	1989648..1990850	-	400	15794924	-	NMA2046	-	hypothetical protein
1877	 55.83	0	1990847..1991215	-	122	15794925	-	NMA2047	-	hypothetical protein
1878	 57.21	0	1991389..1991832	+	147	15794926	-	NMA2048	-	hypothetical protein
1879	 55.39	0	1991959..1992579	-	206	15794927	-	NMA2049	-	hypothetical protein
1880	 55.92	0	1992937..1994136	-	399	15794928	ackA2	NMA2050	-	acetate kinase
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.