IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1731	 52.11	0	1816883..1818517	-	544	15794778	-	NMA1892	-	hypothetical protein
1732	 53.57	0	1818798..1819904	-	368	15794779	serC	NMA1894	-	phosphoserine aminotransferase
1733	 51.33	0	1820251..1820700	+	149	15794780	-	NMA1895	-	hypothetical protein
1734	 57.29	0	1820728..1822230	+	500	161353789	nusA	NMA1896	-	transcription elongation factor NusA
1735	 56.77	0	1822242..1825130	+	962	15794782	infB	NMA1897	-	translation initiation factor IF-2
1736	 59.57	+1	1825341..1826735	-	464	15794783	-	NMA1898	-	integral membrane protein
1737	 58.22	0	1826797..1828146	-	449	15794784	-	NMA1899	-	integral membrane protein
1738	 51.36	0	1828289..1828915	+	208	15794785	-	NMA1900	-	haemolysin
1739	 51.66	0	1828979..1830397	-	472	15794786	-	NMA1901	-	sodium:alanine symporter
1740	 56.24	0	1830724..1831452	+	242	15794787	-	NMA1902	-	hypothetical protein
1741	 52.83	0	1831511..1832110	-	199	15794788	-	NMA1903	-	disulphide bond formation protein
1742	 38.74	-1	1832166..1832387	-	73	15794789	-	NMA1904	-	hypothetical protein
1743	 46.02	0	1832690..1833154	-	154	15794790	-	NMA1905	-	transcription regulator AsnC
1744	 53.26	0	1833479..1834537	+	352	15794791	alr	NMA1906	-	alanine racemase
1745	 37.50	-2	1835214..1835405	-	63	15794792	-	NMA1907A	-	IS1016 transposase
1746	 40.18	-1	1835404..1835856	-	150	15794793	-	NMA1907b	-	IS1016 transposase
1747	 54.57	0	1835999..1837354	-	451	15794794	-	NMA1908	-	hypothetical protein
1748	 44.69	0	1837369..1837641	-	90	15794795	-	NMA1909	-	hypothetical protein
1749	 43.90	-1	1837767..1838504	-	245	15794796	-	NMA1911	-	periplasmic protein
1750	 46.38	0	1838785..1839696	-	303	15794797	-	NMA1912	-	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
1751	 46.97	0	1839829..1840422	+	197	15794798	-	NMA1913	-	hypothetical protein
1752	 53.46	0	1840534..1841154	+	206	15794799	-	NMA1914	-	hypothetical protein
1753	 54.62	0	1841085..1841549	-	154	15794800	-	NMA1915	-	DNA transport competence protein
1754	 48.95	0	1847422..1848606	+	394	15794801	-	NMA1916	-	hypothetical protein
1755	 49.45	0	1848673..1850850	-	725	15794802	spoT	NMA1917a	-	guanosine-3',5'-bis(diphosphate) 3'-pyrophophohydrolase
1756	 51.69	0	1850922..1851128	-	68	15794803	rpoZ	NMA1918	-	DNA-directed RNA polymerase omega chain
1757	 54.21	0	1851187..1851804	-	205	15794804	gmk	NMA1919	-	guanylate kinase
1758	 53.67	0	1851932..1852531	+	199	15794805	apt	NMA1920	-	adenine phosphoribosyltransferase
1759	 53.83	0	1852577..1853386	-	269	15794806	-	NMA1921	-	hypothetical protein
1760	 45.95	0	1853419..1853529	+	36	15794807	-	NMA1922	-	hypothetical protein
1761	 54.13	0	1853690..1855045	+	451	15794808	-	NMA1923	-	protease
1762	 59.33	+1	1855179..1855655	+	158	15794809	-	NMA1924	-	hypothetical protein
1763	 52.38	0	1858414..1859106	-	230	15794810	hemO	NMA1927	-	haem utilisation protein
1764	 55.56	0	1859536..1860840	+	434	15794811	-	NMA1928	-	hypothetical protein
1765	 52.89	0	1860833..1862494	+	553	15794812	-	NMA1929	-	hypothetical protein
1766	 58.77	0	1862494..1863012	+	172	15794813	-	NMA1930	-	lipoprotein
1767	 51.27	0	1863016..1863567	+	183	15794814	tag	NMA1931	-	DNA-3-methyladenine glycosylase I
1768	 55.30	0	1863557..1864198	+	213	15794815	-	NMA1932	-	lipase
1769	 54.44	0	1864473..1864832	+	119	15794816	-	NMA1933	-	integral membrane protein
1770	 56.26	0	1864863..1867715	+	950	15794817	gcvP	NMA1934	-	glycine dehydrogenase
1771	 36.73	-2	1867786..1867932	+	48	15794818	-	NMA1935	-	hypothetical protein
1772	 55.24	0	1868180..1869019	-	279	15794819	-	NMA1936	-	cytochrome
1773	 55.78	0	1869444..1870637	-	397	15794820	tyrB	NMA1937	-	aromatic amino acid aminotransferase
1774	 49.59	0	1870658..1871746	-	362	15794821	trmA	NMA1938	-	tRNA (uracil-5-)-methyltransferase
1775	 58.95	+1	1871893..1872993	+	366	15794822	aroC	NMA1939	-	chorismate synthase
1776	 51.88	0	1873085..1873510	+	141	15794823	-	NMA1940	-	hypothetical protein
1777	 57.70	0	1873584..1875569	-	661	15794824	parE	NMA1941	-	DNA topoisomerase IV subunit B
1778	 56.19	0	1875636..1876160	-	174	15794825	-	NMA1942	-	dinucleoside polyphosphate hydrolase
1779	 53.55	0	1876325..1877620	+	431	15794826	serS	NMA1943	-	seryl-tRNA synthetase
1780	 52.75	0	1877693..1878691	-	332	15794827	ldhA	NMA1944	-	D-lactate dehydrogenase
1781	 58.40	0	1878816..1879892	-	358	15794828	prfA	NMA1945	-	peptide chain release factor 1
1782	 55.79	0	1879996..1880850	-	284	15794829	-	NMA1946	-	hypothetical protein
1783	 58.59	0	1880890..1881879	-	329	15794830	ans	NMA1947	-	L-asparaginase
1784	 53.18	0	1881946..1882731	-	261	15794831	-	NMA1948	-	DedA family integral membrane protein
1785	 56.78	0	1882819..1884153	-	444	15794832	-	NMA1949	-	phosphoglucomutase/phosphomannomutase
1786	 58.33	0	1884283..1885134	-	283	15794833	dhpS	NMA1950	-	dihydropteroate synthase
1787	 54.57	0	1885301..1887523	+	740	15794834	-	NMA1951	-	hypothetical protein
1788	 56.46	0	1887587..1889065	-	492	15794835	-	NMA1952	-	hypothetical protein
1789	 50.78	0	1889085..1889600	-	171	15794836	-	NMA1953	-	hypothetical protein
1790	 55.17	0	1889607..1890041	-	144	15794837	-	NMA1954	-	integral membrane protein
1791	 58.39	0	1890339..1890773	-	144	15794838	-	NMA1955	-	hypothetical protein
1792	 47.09	0	1890948..1891616	+	222	15794839	-	NMA1956	-	IS1016 transposase
1793	 59.72	+1	1891823..1892959	+	378	15794840	fabF2	NMA1957	-	3-oxoacyl-(acyl carrier protein) synthase II
1794	 44.71	0	1893157..1893921	+	254	15794841	lgtF	NMA1958	-	beta-1,4-glucosyltransferase
1795	 47.04	0	1893922..1894986	+	354	15794842	rfaK	NMA1959	-	alpha 1,2 N-acetylglucosamine transferase
1796	 42.69	-1	1895025..1895195	+	56	15794843	-	NMA1960	-	hypothetical protein
1797	 51.79	0	1895373..1896710	+	445	15794844	-	NMA1961	-	integral membrane ion transporter
1798	 53.94	0	1896882..1897541	-	219	15794845	-	NMA1962	-	hypothetical protein
1799	 53.08	0	1897550..1898344	-	264	15794846	thyA	NMA1963	-	thymidylate synthase
1800	 56.18	0	1898767..1900101	+	444	15794847	gdhA	NMA1964	-	glutamate dehydrogenase
1801	 53.90	0	1900390..1901172	-	260	15794848	-	NMA1965	-	GntR family transcriptional regulator
1802	 53.00	0	1901600..1901899	+	99	15794849	-	NMA1966	-	integral membrane protein
1803	 50.00	0	1901926..1902075	+	49	15794850	-	NMA1967	-	hypothetical protein
1804	 56.13	0	1902277..1903680	-	467	15794851	mtrE	NMA1968	-	outer membrane lipoprotein
1805	 54.06	0	1903735..1906938	-	1067	15794852	mtrD	NMA1969	-	drug efflux protein
1806	 58.27	0	1906950..1908188	-	412	15794853	mtrC	NMA1970	-	membrane fusion protein
1807	 51.50	0	1908596..1909228	+	210	15794854	mtrR	NMA1971	-	transcriptional regulato
1808	 29.46	-2	1909507..1909764	-	85	15794855	-	NMA1972	-	hypothetical protein
1809	 48.31	0	1910053..1911621	+	522	15794856	-	NMA1973	-	hypothetical protein
1810	 55.76	0	1911691..1914900	-	1069	15794857	recC	NMA1974	-	exodeoxyribonuclease V
1811	 54.04	0	1915001..1916410	-	469	15794858	-	NMA1975	-	integral membrane protein
1812	 50.73	0	1916846..1917943	-	365	15794859	-	NMA1977	-	cytochrome c
1813	 38.60	-1	1917967..1918137	-	56	15794860	-	NMA1978	-	hypothetical protein
1814	 51.96	0	1918142..1918753	-	203	15794861	-	NMA1979	-	cytochrome oxidase subunit
1815	 51.38	0	1918780..1920225	-	481	15794862	-	NMA1980	-	cytochrome c oxidase subunit
1816	 51.42	0	1920531..1922288	+	585	15794863	-	NMA1981	-	hypothetical protein
1817	 55.34	0	1922314..1922781	+	155	15794864	-	NMA1982	-	hypothetical protein
1818	 51.72	0	1923468..1923902	-	144	15794865	exbD	NMA1983	-	biopolymer transport protein
1819	 55.35	0	1923905..1924567	-	220	15794866	exbB	NMA1984	-	biopolymer transport protein
1820	 56.11	0	1924633..1925475	-	280	15794867	tonB	NMA1985	-	TonB protein
1821	 55.87	0	1925730..1926368	+	212	15794868	-	NMA1986	-	hypothetical protein
1822	 36.97	-2	1926572..1926901	+	109	15794869	-	NMA1987	-	hypothetical protein
1823	 37.45	-2	1926820..1927620	-	266	15794870	-	NMA1988	-	integral membrane protein
1824	 30.25	-2	1927756..1928274	-	172	15794871	-	NMA1989	-	hypothetical protein
1825	 51.71	0	1928596..1929237	-	213	15794872	grxB	NMA1990	-	glutaredoxin 2
1826	 56.58	0	1929458..1931767	+	769	15794873	relA	NMA1991	-	GTP pyrophosphokinase
1827	 52.35	0	1933011..1934414	-	467	15794874	natC	NMA1994	-	periplasmic type I secretion system protein
1828	 50.25	0	1934483..1934683	-	66	15794875	natD'	NMA1995	-	periplasmic type I secretion system protein
1829	 45.39	0	1936559..1936840	+	93	15794877	-	NMA1997	-	hypothetical protein
1830	 44.91	0	1936911..1937126	+	71	15794878	-	NMA1998	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.