IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
127	 47.44	0	117216..117527	-	103	15793161	rpsJ	NMA0133	-	30S ribosomal protein S10
128	 52.57	0	117545..118729	-	394	15793162	tufA1	NMA0134	-	elongation factor Tu
129	 49.95	0	118817..120922	-	701	15793163	fusA	NMA0135	-	elongation factor G
130	 49.68	0	120941..121411	-	156	15793164	rpsG	NMA0136	-	30S ribosomal protein S7
131	 50.00	0	121529..121900	-	123	15793165	rpsL	NMA0137	-	30S ribosomal protein S12
132	 40.67	-1	122079..122228	-	49	15793166	-	NMA0138	-	hypothetical protein
133	 56.20	0	122225..122482	-	85	15793167	-	NMA0139	-	periplasmic protein
134	 48.00	0	122531..122680	-	49	15793168	-	NMA0140	-	hypothetical protein
135	 50.72	0	122773..126948	-	1391	15793169	rpoC	NMA0141	-	DNA-directed RNA polymerase subunit beta'
136	 50.25	0	127100..131278	-	1392	15793170	rpoB	NMA0142	-	DNA-directed RNA polymerase subunit beta
137	 43.82	-1	131469..131840	-	123	15793171	rplL	NMA0143	-	50S ribosomal protein L7/L12
138	 47.31	0	131898..132398	-	166	15793172	rplJ	NMA0144	-	50S ribosomal protein L10
139	 43.39	-1	132628..133323	-	231	15793173	rplA	NMA0145	-	50S ribosomal protein L1
140	 44.83	0	133323..133757	-	144	15793174	rplK	NMA0146	-	50S ribosomal protein L11
141	 44.13	-1	133858..134394	-	178	15793175	nusG	NMA0147	-	transcription antitermination protein NusG
142	 36.92	-2	134396..134674	-	92	15793176	secE	NMA0148	-	preprotein translocase subunit SecE
143	 52.83	0	134871..136055	-	394	15793177	tufA2	NMA0149	-	elongation factor Tu
144	 49.21	0	136472..136723	-	83	15793178	-	NMA0150	-	ferredoxin
145	 53.68	0	136846..137415	-	189	15793179	-	NMA0151	-	DNA methylase
146	 47.24	0	137504..137884	-	126	15793180	-	NMA0153	-	hypothetical protein
147	 33.88	-2	138003..138554	+	183	15793181	-	NMA0154	-	integral membrane protein
148	 44.68	-1	138574..139269	+	231	15793182	-	NMA0155	-	hypothetical protein
149	 53.97	0	139342..141648	-	768	15793183	topA	NMA0156	-	DNA topoisomerase I
150	 53.46	0	141720..142181	-	153	15793184	-	NMA0157	-	hypothetical protein
151	 59.68	+1	142207..143394	-	395	15793185	dprA	NMA0158	-	DprA-like protein
152	 56.65	0	143485..144762	-	425	15793186	-	NMA0159	-	two-component trancriptional regulator
153	 57.33	0	144755..146875	-	706	15793187	-	NMA0160	-	two-component sensor
154	 54.67	0	146875..147474	-	199	15793188	-	NMA0161	-	hypothetical protein
155	 58.02	0	147440..148699	-	419	15793189	-	NMA0162	-	SUN-like protein
156	 59.55	+1	148778..149704	-	308	15793190	fmt	NMA0163	-	methionyl-tRNA formyltransferase
157	 54.96	0	149791..150294	-	167	15793191	def	NMA0164	-	peptide deformylase
158	 56.16	0	150478..151695	+	405	15793192	-	NMA0165	-	periplasmic protein
159	 53.15	0	151758..152423	-	221	15793193	-	NMA0166	-	integral membrane protein
160	 55.56	0	152488..152946	-	152	15793194	pyrI	NMA0167	-	aspartate carbamoyltransferase regulatory subunit
161	 56.57	0	152956..153876	-	306	15793195	pyrB	NMA0168	-	aspartate carbamoyltransferase catalytic subunit
162	 56.23	0	154112..154954	+	280	15793196	-	NMA0169	-	hypothetical protein
163	 57.86	0	154951..155109	+	52	15793197	-	NMA0170	-	lipoprotein
164	 39.72	-1	155236..155955	+	239	15793198	-	NMA0171	-	hypothetical protein
165	 22.78	-2	156030..156266	+	78	15793199	-	NMA0171A	-	integral membrane protein
166	 39.78	-1	156214..156399	+	61	15793200	-	NMA0172	-	hypothetical protein
167	 38.59	-1	156411..156905	+	164	15793201	-	NMA0173	-	hypothetical protein
168	 59.24	+1	157181..157732	-	183	15793202	-	NMA0174	-	integral membrane protein
169	 39.96	-1	158005..158457	-	150	15793204	-	NMA0176	-	IS1016 transposase
170	 60.08	+1	158717..160189	+	490	15793205	pykA	NMA0177	-	pyruvate kinase
171	 56.49	0	160499..161893	+	464	15793206	-	NMA0178	-	hypothetical protein
172	 52.72	0	162205..162498	-	97	15793207	-	NMA0179	-	hypothetical protein
173	 50.00	0	162520..162627	-	35	15793208	-	NMA0180	-	hypothetical protein
174	 51.52	0	163021..163218	-	65	15793209	-	NMA0181	-	hypothetical protein
175	 57.42	0	163229..164245	-	338	15793210	-	NMA0182	-	lipoprotein
176	 53.25	0	164344..165558	-	404	15793211	gltS	NMA0183	-	sodium/glutamate symport carrier protein
177	 58.00	0	165776..167182	-	468	15793212	-	NMA0184	-	hypothetical protein
178	 48.73	0	167551..168810	-	419	15793213	lipB	NMA0185	-	capsule polysaccharide modification protein
179	 51.68	0	168947..171061	-	704	15793214	lipA	NMA0186	-	capsule polysaccharide modification protein
180	 52.79	0	171085..171639	-	184	15793215	rfbC2	NMA0187	-	dTDP-D-glucose 4,6-dehydratase
181	 53.06	0	171678..172544	-	288	15793216	rfbA2	NMA0188	-	glucose-1-phosphate thymidylyltransferase
182	 54.09	0	172650..173675	-	341	15793217	rfbB2	NMA0189	-	dTDP-glucose 4,6-dehydratase
183	 54.53	0	173791..174408	-	205	15793218	galE2'	NMA0190	-	truncated UDP-glucose 4-epimerase
184	 58.75	0	175860..178133	-	757	15793219	-	NMA0194	-	transcriptional accessory protein
185	 46.54	0	178197..178847	-	216	15793220	ctrD	NMA0195	-	capsule polysaccharide export ATP-binding protein
186	 45.36	0	178844..179641	-	265	15793221	ctrC	NMA0196	-	capsule polysaccharide export inner-membrane protein
187	 45.62	0	179641..180804	-	387	15793222	ctrB	NMA0197	-	capsule polysaccharide export inner-membrane protein
188	 47.16	0	180819..181982	-	387	15793223	ctrA	NMA0198	-	capsule polysaccharide export outer membrane protein
189	 34.85	-2	182201..183319	+	372	15793224	sacA	NMA0199	-	UDP-N-acetyl-D-glucosamine 2-epimerase
190	 30.46	-2	183321..184958	+	545	15793225	sacB	NMA0200	-	capsule biosynthesis protein
191	 27.69	-2	185031..185774	+	247	15793226	sacC	NMA0201	-	capsule biosynthesis protein
192	 24.54	-2	185776..186639	+	287	15793227	sacD	NMA0202	-	capsule biosynthesis protein
193	 51.76	0	186684..187703	+	339	15793228	galE	NMA0203	-	UDP-glucose 4-epimerase
194	 54.09	0	187819..188844	+	341	15793229	rfbB	NMA0204	-	dTDP-glucose 4,6-dehydratase
195	 53.06	0	188950..189816	+	288	15793230	rfbA	NMA0205	-	glucose-1-phosphate thymidylyltransferase
196	 53.75	0	189855..190427	+	190	15793231	rfbC	NMA0206	-	dTDP-4-dehydrorhamnose 3,5-epimerase
197	 54.78	0	190470..192488	-	672	15793232	-	NMA0207	-	integral membrane protein
198	 53.12	0	192683..193804	-	373	15793233	dnaJ	NMA0209	-	DnaJ protein
199	 40.12	-1	193851..194012	+	53	15793234	-	NMA0210	-	hypothetical protein
200	 53.98	0	194074..194538	-	154	15793235	-	NMA0211	-	DNA transport competence protein
201	 51.70	0	200192..200338	-	48	15793236	-	NMA0212	-	hypothetical protein
202	 49.64	0	200338..200754	-	138	15793237	dksA	NMA0213	-	DnaK suppressor protein
203	 53.66	0	200901..201692	-	263	15793238	proC	NMA0215	-	pyrroline-5-carboxylate reductase
204	 50.74	0	201741..202148	-	135	15793239	-	NMA0216	-	lipoprotein
205	 55.75	0	202148..202834	-	228	15793240	-	NMA0217	-	hypothetical protein
206	 56.90	0	202954..203997	+	347	15793241	pilT	NMA0218	-	pilus retraction protein
207	 56.07	0	204160..205386	+	408	15793242	pilU	NMA0219	-	pilT-like protein
208	 60.39	+1	205672..207822	+	716	15793243	-	NMA0220	-	integral membrane protein
209	 52.78	0	209578..210585	-	335	15793244	-	NMA0221	-	IS1106 transposase
210	 55.28	0	211062..212519	+	485	15793245	-	NMA0222	-	peptide transporter
211	 53.08	0	213431..214534	-	367	15793246	prfB	NMA0224	-	peptide chain release factor 2
212	 53.82	0	214637..215539	-	300	15793247	-	NMA0225	-	lipoprotein
213	 50.00	0	215872..216321	+	149	15793248	-	NMA0226	-	integral membrane protein
214	 54.69	0	216395..216703	+	102	15793249	-	NMA0227	-	periplasmic protein
215	 54.92	0	216819..217661	+	280	15793250	-	NMA0228	-	hypothetical protein
216	 49.13	0	217651..218397	+	248	15793251	-	NMA0229	-	hypothetical protein
217	 47.28	0	218419..219006	+	195	15793252	-	NMA0230	-	RNA polymerase sigma factor
218	 41.84	-1	219450..219872	+	140	15793253	-	NMA0233	-	lipoprotein
219	 36.75	-2	221786..222019	-	77	15793254	-	NMA0236	-	hypothetical protein
220	 49.25	0	222047..222649	-	200	15793255	-	NMA0237	-	hypothetical protein
221	 50.08	0	222683..223954	-	423	15793256	purD	NMA0238	-	phosphoribosylamine--glycine ligase
222	 44.34	-1	224111..224428	+	105	15793257	-	NMA0239	-	hypothetical protein
223	 44.28	-1	224480..225091	-	203	15793258	-	NMA0240	-	hypothetical protein
224	 47.44	0	225154..226089	-	311	15793259	etfA	NMA0241	-	electron transfer flavoprotein alpha-subunit
225	 46.40	0	226100..226849	-	249	15793260	etfB	NMA0242	-	electron transfer flavoprotein beta-subunit
226	 46.54	0	227075..228043	-	322	15793261	-	NMA0243	-	lipopolysaccharide heptosyltransferase I
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.