IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1679	 40.40	-1	1781054..1781251	-	65	15794726	-	NMA1836	-	hypothetical protein
1680	 38.28	-1	1781415..1781879	-	154	15794727	-	NMA1837	-	hypothetical protein
1681	 40.31	-1	1781866..1782252	-	128	15794728	-	NMA1838	-	DNA-binding protein
1682	 57.07	0	1782428..1782802	-	124	15794729	-	NMA1840	-	hypothetical protein
1683	 58.96	+1	1782816..1784243	-	475	15794730	-	NMA1841	-	hypothetical protein
1684	 54.50	0	1784243..1784431	-	62	15794731	-	NMA1842	-	hypothetical protein
1685	 58.30	0	1784428..1785096	-	222	15794732	-	NMA1843	-	hypothetical protein
1686	 59.15	+1	1785080..1785505	-	141	15794733	-	NMA1844	-	hypothetical protein
1687	 58.23	0	1785502..1785975	-	157	15794734	-	NMA1845	-	hypothetical protein
1688	 55.81	0	1786013..1786915	-	300	15794735	-	NMA1847	-	hypothetical protein
1689	 58.97	+1	1786937..1788001	-	354	15794736	-	NMA1848	-	hypothetical protein
1690	 57.63	0	1788210..1788707	-	165	15794737	-	NMA1849	-	hypothetical protein
1691	 54.86	0	1788811..1790157	-	448	15794738	-	NMA1850	-	hypothetical protein
1692	 56.79	0	1790150..1791709	-	519	15794739	-	NMA1851	-	hypothetical protein
1693	 55.25	0	1791788..1793407	-	539	15794740	-	NMA1852	-	hypothetical protein
1694	 35.90	-2	1793419..1793613	+	64	15794741	-	NMA1853	-	hypothetical protein
1695	 61.14	+1	1793610..1794116	-	168	15794742	-	NMA1854	-	DNA-binding protein
1696	 55.09	0	1794119..1794334	-	71	15794743	-	NMA1855	-	hypothetical protein
1697	 44.68	-1	1794334..1794615	-	93	15794744	-	NMA1856	-	hypothetical protein
1698	 54.68	0	1794612..1794953	-	113	15794745	-	NMA1857	-	hypothetical protein
1699	 42.01	-1	1794950..1795168	-	72	15794746	-	NMA1858	-	hypothetical protein
1700	 46.20	0	1795181..1795351	+	56	15794747	-	NMA1859	-	hypothetical protein
1701	 59.56	+1	1795396..1795578	-	60	15794748	-	NMA1860	-	hypothetical protein
1702	 52.62	0	1795598..1796017	-	139	15794749	-	NMA1861	-	hypothetical protein
1703	 54.43	0	1795989..1796225	-	78	15794750	-	NMA1862	-	hypothetical protein
1704	 51.52	0	1796228..1796392	-	54	15794751	-	NMA1863	-	hypothetical protein
1705	 56.23	0	1796598..1797143	-	181	15794752	-	NMA1864	-	hypothetical protein
1706	 50.44	0	1797275..1797952	-	225	15794753	-	NMA1865	-	hypothetical protein
1707	 56.60	0	1797964..1798410	-	148	15794754	-	NMA1866	-	integral membrane protein
1708	 52.50	0	1798407..1798886	-	159	15794755	-	NMA1867	-	hypothetical protein
1709	 56.88	0	1798917..1799192	-	91	15794756	hupB2	NMA1868	-	DNA-binding protein HU-beta
1710	 49.25	0	1799241..1799441	-	66	15794757	-	NMA1869	-	hypothetical protein
1711	 49.16	0	1799442..1800092	-	216	15794758	-	NMA1870	-	hypothetical protein
1712	 51.96	0	1800098..1800709	-	203	15794759	-	NMA1871	-	hypothetical protein
1713	 36.92	-2	1800702..1800896	-	64	15794760	-	NMA1872	-	hypothetical protein
1714	 55.48	0	1800868..1801323	-	151	15794761	-	NMA1873	-	hypothetical protein
1715	 55.29	0	1801307..1801684	-	125	15794762	-	NMA1874	-	hypothetical protein
1716	 43.17	-1	1801803..1802117	-	104	15794763	-	NMA1875	-	hypothetical protein
1717	 48.61	0	1802114..1802329	-	71	15794764	-	NMA1876	-	hypothetical protein
1718	 52.12	0	1802310..1802474	-	54	15794765	-	NMA1877	-	small secreted protein
1719	 51.63	0	1802490..1802642	-	50	15794766	-	NMA1878	-	hypothetical protein
1720	 41.00	-1	1802645..1802944	-	99	15794767	-	NMA1879	-	hypothetical protein
1721	 53.50	0	1802934..1803176	-	80	15794768	-	NMA1880	-	hypothetical protein
1722	 51.37	0	1803252..1804166	-	304	15794769	-	NMA1881	-	DNA-binding protein
1723	 54.79	0	1804208..1806253	-	681	15794770	-	NMA1882	-	transposase
1724	 48.11	0	1806331..1806594	-	87	15794771	-	NMA1883	-	Ner-like DNA-binding protein
1725	 50.50	0	1806811..1807515	+	234	15794772	-	NMA1884	-	regulator
1726	 35.22	-2	1807617..1807775	-	52	15794773	-	NMA1885	-	hypothetical protein
1727	 53.41	0	1807779..1810034	-	751	15794774	nor	NMA1886	-	nitric oxide reductase
1728	 53.75	0	1810404..1811564	+	386	15794775	aniA	NMA1887	-	nitrite reductase, major outer membrane copper-containing protein
1729	 54.10	0	1811744..1812499	+	251	15794776	-	NMA1888	-	hypothetical protein
1730	 53.23	0	1816250..1816807	-	185	15794777	-	NMA1891	-	hypothetical protein
1731	 52.11	0	1816883..1818517	-	544	15794778	-	NMA1892	-	hypothetical protein
1732	 53.57	0	1818798..1819904	-	368	15794779	serC	NMA1894	-	phosphoserine aminotransferase
1733	 51.33	0	1820251..1820700	+	149	15794780	-	NMA1895	-	hypothetical protein
1734	 57.29	0	1820728..1822230	+	500	161353789	nusA	NMA1896	-	transcription elongation factor NusA
1735	 56.77	0	1822242..1825130	+	962	15794782	infB	NMA1897	-	translation initiation factor IF-2
1736	 59.57	+1	1825341..1826735	-	464	15794783	-	NMA1898	-	integral membrane protein
1737	 58.22	0	1826797..1828146	-	449	15794784	-	NMA1899	-	integral membrane protein
1738	 51.36	0	1828289..1828915	+	208	15794785	-	NMA1900	-	haemolysin
1739	 51.66	0	1828979..1830397	-	472	15794786	-	NMA1901	-	sodium:alanine symporter
1740	 56.24	0	1830724..1831452	+	242	15794787	-	NMA1902	-	hypothetical protein
1741	 52.83	0	1831511..1832110	-	199	15794788	-	NMA1903	-	disulphide bond formation protein
1742	 38.74	-1	1832166..1832387	-	73	15794789	-	NMA1904	-	hypothetical protein
1743	 46.02	0	1832690..1833154	-	154	15794790	-	NMA1905	-	transcription regulator AsnC
1744	 53.26	0	1833479..1834537	+	352	15794791	alr	NMA1906	-	alanine racemase
1745	 37.50	-2	1835214..1835405	-	63	15794792	-	NMA1907A	-	IS1016 transposase
1746	 40.18	-1	1835404..1835856	-	150	15794793	-	NMA1907b	-	IS1016 transposase
1747	 54.57	0	1835999..1837354	-	451	15794794	-	NMA1908	-	hypothetical protein
1748	 44.69	0	1837369..1837641	-	90	15794795	-	NMA1909	-	hypothetical protein
1749	 43.90	-1	1837767..1838504	-	245	15794796	-	NMA1911	-	periplasmic protein
1750	 46.38	0	1838785..1839696	-	303	15794797	-	NMA1912	-	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
1751	 46.97	0	1839829..1840422	+	197	15794798	-	NMA1913	-	hypothetical protein
1752	 53.46	0	1840534..1841154	+	206	15794799	-	NMA1914	-	hypothetical protein
1753	 54.62	0	1841085..1841549	-	154	15794800	-	NMA1915	-	DNA transport competence protein
1754	 48.95	0	1847422..1848606	+	394	15794801	-	NMA1916	-	hypothetical protein
1755	 49.45	0	1848673..1850850	-	725	15794802	spoT	NMA1917a	-	guanosine-3',5'-bis(diphosphate) 3'-pyrophophohydrolase
1756	 51.69	0	1850922..1851128	-	68	15794803	rpoZ	NMA1918	-	DNA-directed RNA polymerase omega chain
1757	 54.21	0	1851187..1851804	-	205	15794804	gmk	NMA1919	-	guanylate kinase
1758	 53.67	0	1851932..1852531	+	199	15794805	apt	NMA1920	-	adenine phosphoribosyltransferase
1759	 53.83	0	1852577..1853386	-	269	15794806	-	NMA1921	-	hypothetical protein
1760	 45.95	0	1853419..1853529	+	36	15794807	-	NMA1922	-	hypothetical protein
1761	 54.13	0	1853690..1855045	+	451	15794808	-	NMA1923	-	protease
1762	 59.33	+1	1855179..1855655	+	158	15794809	-	NMA1924	-	hypothetical protein
1763	 52.38	0	1858414..1859106	-	230	15794810	hemO	NMA1927	-	haem utilisation protein
1764	 55.56	0	1859536..1860840	+	434	15794811	-	NMA1928	-	hypothetical protein
1765	 52.89	0	1860833..1862494	+	553	15794812	-	NMA1929	-	hypothetical protein
1766	 58.77	0	1862494..1863012	+	172	15794813	-	NMA1930	-	lipoprotein
1767	 51.27	0	1863016..1863567	+	183	15794814	tag	NMA1931	-	DNA-3-methyladenine glycosylase I
1768	 55.30	0	1863557..1864198	+	213	15794815	-	NMA1932	-	lipase
1769	 54.44	0	1864473..1864832	+	119	15794816	-	NMA1933	-	integral membrane protein
1770	 56.26	0	1864863..1867715	+	950	15794817	gcvP	NMA1934	-	glycine dehydrogenase
1771	 36.73	-2	1867786..1867932	+	48	15794818	-	NMA1935	-	hypothetical protein
1772	 55.24	0	1868180..1869019	-	279	15794819	-	NMA1936	-	cytochrome
1773	 55.78	0	1869444..1870637	-	397	15794820	tyrB	NMA1937	-	aromatic amino acid aminotransferase
1774	 49.59	0	1870658..1871746	-	362	15794821	trmA	NMA1938	-	tRNA (uracil-5-)-methyltransferase
1775	 58.95	+1	1871893..1872993	+	366	15794822	aroC	NMA1939	-	chorismate synthase
1776	 51.88	0	1873085..1873510	+	141	15794823	-	NMA1940	-	hypothetical protein
1777	 57.70	0	1873584..1875569	-	661	15794824	parE	NMA1941	-	DNA topoisomerase IV subunit B
1778	 56.19	0	1875636..1876160	-	174	15794825	-	NMA1942	-	dinucleoside polyphosphate hydrolase
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.