IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1613	 54.59	0	1712842..1713495	+	217	15794660	-	NMA1767	-	lipoprotein
1614	 55.05	0	1713574..1714227	+	217	15794661	hisG	NMA1768	-	ATP phosphoribosyltransferase catalytic subunit
1615	 43.78	-1	1714331..1715230	+	299	15794662	-	NMA1769	-	hypothetical protein
1616	 58.06	0	1715227..1716516	+	429	15794663	hisD	NMA1770	-	histidinol dehydrogenase
1617	 56.47	0	1716562..1717659	+	365	15794664	hisC	NMA1771	-	histidinol-phosphate aminotransferase
1618	 57.69	0	1717839..1718573	+	244	161353790	hisB	NMA1772	-	imidazoleglycerol-phosphate dehydratase
1619	 57.70	0	1718668..1719537	+	289	15794666	-	NMA1773	-	hypothetical protein
1620	 51.52	0	1719815..1720177	+	120	15794667	-	NMA1774	-	transcriptional regulator
1621	 55.79	0	1720208..1720544	+	111	15794668	-	NMA1775	-	insertion element IS1106A3 transposase
1622	 52.59	0	1720540..1721214	+	224	15794669	-	NMA1776	-	insertion element IS1106A3 transposase
1623	 54.40	0	1721483..1722346	+	287	15794670	-	NMA1777	-	integral membrane protein
1624	 47.96	0	1722397..1723449	-	350	15794671	-	NMA1778	-	putative periplasmic protease
1625	 48.76	0	1724296..1724859	-	187	15794672	pgsA	NMA1779	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
1626	 46.53	0	1724965..1725108	-	47	15794673	-	NMA1780	-	hypothetical protein
1627	 50.50	0	1725086..1725388	-	100	15794674	-	NMA1781	-	hypothetical protein
1628	 56.55	0	1725670..1726005	-	111	15794675	-	NMA1782	-	hypothetical protein
1629	 52.87	0	1726134..1727039	+	301	15794676	-	NMA1783	-	AraC family transcription regulator
1630	 47.40	0	1727101..1727676	-	191	15794677	-	NMA1784	-	hypothetical protein
1631	 55.92	0	1727736..1728638	+	300	15794678	-	NMA1785	-	hypothetical protein
1632	 51.55	0	1728679..1729809	-	376	15794679	-	NMA1786	-	polyamine permease substrate-binding protein
1633	 55.28	0	1730014..1732638	+	874	15794680	alaS	NMA1788	-	alanyl-tRNA synthetase
1634	 29.64	-2	1732700..1733431	+	243	15794681	-	NMA1789	-	hypothetical protein
1635	 55.06	0	1734140..1736551	+	803	15794682	-	NMA1791	-	hypothetical protein
1636	 38.06	-1	1737566..1738834	+	422	15794683	-	NMA1792	-	hypothetical protein
1637	 40.38	-1	1738846..1739157	+	103	15794684	-	NMA1793	-	hypothetical protein
1638	 35.82	-2	1739161..1739361	+	66	15794685	-	NMA1794	-	hypothetical protein
1639	 45.02	0	1739599..1739829	+	76	15794686	-	NMA1795	-	hypothetical protein
1640	 41.91	-1	1739857..1740159	+	100	15794687	-	NMA1796	-	hypothetical protein
1641	 46.91	0	1740491..1742110	+	539	15794688	tspB	NMA1797	-	TspB protein
1642	 44.91	0	1742413..1742697	+	94	15794689	-	NMA1798	-	integral membrane protein
1643	 44.78	0	1742698..1743885	+	395	15794690	-	NMA1799	-	hypothetical protein
1644	 39.29	-1	1744100..1745056	+	318	15794691	-	NMA1800	-	invertase/transposase
1645	 54.97	0	1745395..1746078	-	227	15794692	gpm	NMA1801	-	phosphoglyceromutase
1646	 56.57	0	1746380..1748677	+	765	15794693	parC	NMA1802	-	DNA topoisomerase IV subunit A
1647	 58.17	0	1748697..1750214	+	505	15794694	-	NMA1803	-	two component sensor kinase
1648	 57.69	0	1750266..1750733	+	155	15794695	-	NMA1805	-	two component response regulator
1649	 60.42	+1	1750837..1751589	+	250	15794696	-	NMA1806	-	hypothetical protein
1650	 42.51	-1	1752623..1752829	-	68	15794697	-	NMA1807	-	hypothetical protein
1651	 56.92	0	1752924..1754093	-	389	15794698	metZ	NMA1808	-	O-succinylhomoserine sulfhydrolase
1652	 55.77	0	1754391..1755152	-	253	15794699	-	NMA1809	-	hypothetical protein
1653	 53.57	0	1755252..1755503	+	83	15794700	-	NMA1810	-	hypothetical protein
1654	 51.30	0	1755555..1756361	+	268	15794701	hisJ	NMA1811	-	histidine-binding periplasmic protein
1655	 55.82	0	1756551..1758191	+	546	15794702	fumA	NMA1812	-	fumarate hydratase
1656	 58.46	0	1758289..1759701	+	470	15794703	trkA	NMA1813	-	potassium transporter peripheral membrane component
1657	 51.14	0	1760005..1760970	+	321	15794704	-	NMA1814	-	IS1655 transposase
1658	 57.13	0	1762484..1763290	+	268	15794705	thiD	NMA1815	-	phosphomethylpyrimidine kinase
1659	 54.27	0	1763340..1764194	-	284	15794706	-	NMA1816	-	tellurite resistance protein TehB
1660	 57.53	0	1764323..1764760	+	145	15794707	rnhA	NMA1817	-	ribonuclease HI
1661	 54.07	0	1766062..1766466	+	134	15794708	-	NMA1818	-	hypothetical protein
1662	 56.79	0	1766506..1767690	+	394	15794709	-	NMA1819	-	hypothetical protein
1663	 48.31	0	1767753..1768286	-	177	15794710	gpxA	NMA1820	-	glutathione peroxidase
1664	 47.14	0	1768546..1769385	-	279	15794711	-	NMA1821	-	hypothetical protein
1665	 52.35	0	1769733..1770221	-	162	15794712	-	NMA1822	-	hypothetical protein
1666	 52.56	0	1770222..1770845	-	207	15794713	-	NMA1823	-	hypothetical protein
1667	 49.85	0	1770842..1773124	-	760	15794714	-	NMA1824	-	hypothetical protein
1668	 54.32	0	1773127..1773693	-	188	15794715	-	NMA1825	-	hypothetical protein
1669	 54.69	0	1773690..1774265	-	191	15794716	-	NMA1826	-	hypothetical protein
1670	 57.61	0	1774268..1774753	-	161	15794717	-	NMA1827	-	hypothetical protein
1671	 56.78	0	1774750..1775103	-	117	15794718	-	NMA1828	-	hypothetical protein
1672	 57.62	0	1775164..1775793	-	209	15794719	-	NMA1829	-	hypothetical protein
1673	 58.16	0	1775794..1776933	-	379	15794720	-	NMA1830	-	hypothetical protein
1674	 57.60	0	1776917..1778284	-	455	15794721	-	NMA1831	-	hypothetical protein
1675	 56.79	0	1778284..1778526	-	80	15794722	-	NMA1832	-	hypothetical protein
1676	 56.67	0	1778654..1780333	-	559	15794723	-	NMA1833	-	DNA-binding protein
1677	 58.63	0	1780330..1780578	-	82	15794724	-	NMA1834	-	hypothetical protein
1678	 54.10	0	1780536..1780925	-	129	15794725	-	NMA1835	-	hypothetical protein
1679	 40.40	-1	1781054..1781251	-	65	15794726	-	NMA1836	-	hypothetical protein
1680	 38.28	-1	1781415..1781879	-	154	15794727	-	NMA1837	-	hypothetical protein
1681	 40.31	-1	1781866..1782252	-	128	15794728	-	NMA1838	-	DNA-binding protein
1682	 57.07	0	1782428..1782802	-	124	15794729	-	NMA1840	-	hypothetical protein
1683	 58.96	+1	1782816..1784243	-	475	15794730	-	NMA1841	-	hypothetical protein
1684	 54.50	0	1784243..1784431	-	62	15794731	-	NMA1842	-	hypothetical protein
1685	 58.30	0	1784428..1785096	-	222	15794732	-	NMA1843	-	hypothetical protein
1686	 59.15	+1	1785080..1785505	-	141	15794733	-	NMA1844	-	hypothetical protein
1687	 58.23	0	1785502..1785975	-	157	15794734	-	NMA1845	-	hypothetical protein
1688	 55.81	0	1786013..1786915	-	300	15794735	-	NMA1847	-	hypothetical protein
1689	 58.97	+1	1786937..1788001	-	354	15794736	-	NMA1848	-	hypothetical protein
1690	 57.63	0	1788210..1788707	-	165	15794737	-	NMA1849	-	hypothetical protein
1691	 54.86	0	1788811..1790157	-	448	15794738	-	NMA1850	-	hypothetical protein
1692	 56.79	0	1790150..1791709	-	519	15794739	-	NMA1851	-	hypothetical protein
1693	 55.25	0	1791788..1793407	-	539	15794740	-	NMA1852	-	hypothetical protein
1694	 35.90	-2	1793419..1793613	+	64	15794741	-	NMA1853	-	hypothetical protein
1695	 61.14	+1	1793610..1794116	-	168	15794742	-	NMA1854	-	DNA-binding protein
1696	 55.09	0	1794119..1794334	-	71	15794743	-	NMA1855	-	hypothetical protein
1697	 44.68	-1	1794334..1794615	-	93	15794744	-	NMA1856	-	hypothetical protein
1698	 54.68	0	1794612..1794953	-	113	15794745	-	NMA1857	-	hypothetical protein
1699	 42.01	-1	1794950..1795168	-	72	15794746	-	NMA1858	-	hypothetical protein
1700	 46.20	0	1795181..1795351	+	56	15794747	-	NMA1859	-	hypothetical protein
1701	 59.56	+1	1795396..1795578	-	60	15794748	-	NMA1860	-	hypothetical protein
1702	 52.62	0	1795598..1796017	-	139	15794749	-	NMA1861	-	hypothetical protein
1703	 54.43	0	1795989..1796225	-	78	15794750	-	NMA1862	-	hypothetical protein
1704	 51.52	0	1796228..1796392	-	54	15794751	-	NMA1863	-	hypothetical protein
1705	 56.23	0	1796598..1797143	-	181	15794752	-	NMA1864	-	hypothetical protein
1706	 50.44	0	1797275..1797952	-	225	15794753	-	NMA1865	-	hypothetical protein
1707	 56.60	0	1797964..1798410	-	148	15794754	-	NMA1866	-	integral membrane protein
1708	 52.50	0	1798407..1798886	-	159	15794755	-	NMA1867	-	hypothetical protein
1709	 56.88	0	1798917..1799192	-	91	15794756	hupB2	NMA1868	-	DNA-binding protein HU-beta
1710	 49.25	0	1799241..1799441	-	66	15794757	-	NMA1869	-	hypothetical protein
1711	 49.16	0	1799442..1800092	-	216	15794758	-	NMA1870	-	hypothetical protein
1712	 51.96	0	1800098..1800709	-	203	15794759	-	NMA1871	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.