IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1486	 53.27	0	1546172..1547425	-	417	15794533	-	NMA1639	-	integral membrane protein
1487	 60.00	+1	1547699..1549678	+	659	15794534	-	NMA1640	-	aminopeptidase
1488	 51.09	0	1550999..1551820	-	273	15794535	-	NMA1641	-	insertion element IS1106 transposase
1489	 52.27	0	1552433..1553620	-	395	15794536	porA	NMA1642	-	porin, class I outer membrane protein
1490	 53.04	0	1556634..1557110	-	158	15794537	greA	NMA1643	-	transcription elongation factor
1491	 57.91	0	1557502..1558803	+	433	15794538	aroA	NMA1644	-	3-phosphoshikimate 1-carboxyvinyltransferase
1492	 58.05	0	1558846..1559379	-	177	15794539	-	NMA1645	-	lipoprotein
1493	 57.03	0	1559588..1561165	-	525	15794540	-	NMA1646	-	phopholipase D-family protein
1494	 53.05	0	1561226..1562767	-	513	15794541	-	NMA1647	-	integral membrane protein
1495	 55.38	0	1562916..1563695	+	259	15794542	-	NMA1648	-	hypothetical protein
1496	 53.56	0	1563692..1564393	+	233	15794543	-	NMA1649	-	hypothetical protein
1497	 53.95	0	1564390..1565844	+	484	15794544	-	NMA1650	-	iron-sulphur protein
1498	 57.41	0	1566027..1566512	-	161	15794545	purE	NMA1651	-	phosphoribosylaminoimidazole carboxylase catalytic subunit
1499	 55.23	0	1566560..1567276	-	238	15794546	-	NMA1652	-	periplasmic protein
1500	 55.01	0	1567276..1567944	-	222	15794547	-	NMA1653	-	methyltransferase
1501	 45.16	0	1567955..1568140	-	61	15794548	-	NMA1654	-	hypothetical protein
1502	 58.47	0	1568283..1570259	+	658	15794549	mutL	NMA1655	-	DNA mismatch repair protein
1503	 58.26	0	1570354..1572483	+	709	15794550	dnaZX	NMA1656	-	DNA polymerase III subunits gamma and tau
1504	 52.98	0	1572563..1572898	+	111	15794551	-	NMA1657	-	hypothetical protein
1505	 56.26	0	1574167..1575213	-	348	15794552	recA	NMA1658	-	recombinase A
1506	 57.89	0	1575434..1576231	+	265	15794553	aroD	NMA1659	-	3-dehydroquinate dehydratase
1507	 53.32	0	1576251..1578266	+	671	15794554	rep	NMA1660	-	ATP-dependent DNA helicase
1508	 57.03	0	1578334..1579392	-	352	15794555	-	NMA1661	-	impB/mucB/samB family protein
1509	 51.68	0	1579640..1580833	-	397	15794556	-	NMA1662	-	hypothetical protein
1510	 50.52	0	1580869..1582776	-	635	15794557	-	NMA1663	-	hypothetical protein
1511	 52.69	0	1583002..1583781	+	259	15794558	-	NMA1664	-	ferredoxin NADP+ reductase
1512	 48.48	0	1583992..1585404	-	470	15794559	-	NMA1665	-	DNA polymerase III subunit
1513	 51.96	0	1586222..1587397	+	391	15794560	-	NMA1666	-	hypothetical protein
1514	 54.10	0	1587457..1588005	-	182	15794561	-	NMA1667	-	inner membrane protein
1515	 53.77	0	1588008..1589504	-	498	15794562	-	NMA1668	-	ferredoxin
1516	 55.45	0	1590031..1592010	+	659	15794563	tkt	NMA1669	-	transketolase
1517	 57.52	0	1592151..1593539	+	462	15794564	fumC	NMA1670	-	fumarate hydratase
1518	 55.74	0	1593604..1594527	-	307	15794565	-	NMA1671	-	hypothetical protein
1519	 58.67	0	1594899..1595423	-	174	15794566	ssb	NMA1672	-	single-stranded binding protein
1520	 57.43	0	1595427..1596812	-	461	15794567	-	NMA1673	-	integral membrane transporter
1521	 59.29	+1	1596920..1597543	-	207	15794568	-	NMA1674	-	transglycosylase
1522	 48.92	0	1598453..1598869	-	138	15794569	-	NMA1675	-	hypothetical protein
1523	 61.29	+1	1600962..1601054	+	30	15794570	-	NMA1677a	-	hypothetical protein
1524	 54.39	0	1601254..1601709	+	151	15794571	-	NMA1678	-	hypothetical protein
1525	 55.67	0	1601826..1603334	+	502	15794572	ppx/gppA	NMA1679	-	exopolyphosphatase
1526	 51.79	0	1603495..1603857	+	120	15794573	-	NMA1680	-	membrane protein
1527	 58.19	0	1604187..1604528	-	113	15794574	-	NMA1681	-	hypothetical protein
1528	 54.20	0	1604534..1605544	-	336	15794575	trpS	NMA1682	-	tryptophanyl-tRNA synthetase
1529	 52.95	0	1605805..1608384	+	859	15794576	clpB	NMA1683	-	ClpB protein
1530	 53.17	0	1608471..1609685	-	404	15794577	-	NMA1684	-	aminotransferase AlaT
1531	 53.81	0	1609774..1609983	-	69	15794578	-	NMA1685	-	tautomerase
1532	 54.28	0	1610328..1611134	+	268	15794579	-	NMA1686	-	hypothetical protein
1533	 52.76	0	1611192..1612457	-	421	15794580	-	NMA1687	-	glutamate dehydrogenase
1534	 56.50	0	1612864..1613571	+	235	15794581	-	NMA1688	-	phosphoglycolate phosphatase
1535	 53.90	0	1613639..1614100	+	153	15794582	recX	NMA1689	-	recombination regulator RecX
1536	 50.93	0	1614120..1614335	+	71	15794583	-	NMA1690	-	hypothetical protein
1537	 55.07	0	1614488..1614970	+	160	15794584	-	NMA1691	-	acyl-CoA hydrolase
1538	 57.85	0	1615331..1616578	-	415	15794585	-	NMA1692	-	membrane peptidase
1539	 56.89	0	1616681..1617427	-	248	15794586	surE	NMA1693	-	SurE protein
1540	 54.46	0	1617444..1619000	-	518	15794587	-	NMA1694	-	hypothetical protein
1541	 53.23	0	1619368..1620156	-	262	15794588	-	NMA1695	-	fimbrial assembly protein
1542	 54.88	0	1620265..1621698	-	477	15794589	gabD	NMA1696	-	succinate semialdehyde dehydrogenase
1543	 59.84	+1	1622362..1622742	-	126	15794590	-	NMA1697	-	lipoprotein
1544	 55.72	0	1623218..1625299	+	693	15794591	-	NMA1698	-	integral membrane protein (CstA-like)
1545	 54.87	0	1625289..1625483	+	64	15794592	-	NMA1699	-	hypothetical protein
1546	 49.87	0	1627036..1629804	+	922	15794593	-	NMA1700	-	outer membrane substrate binding protein
1547	 54.68	0	1630967..1632184	-	405	15794594	lysC	NMA1701	-	aspartate kinase
1548	 55.83	0	1632386..1633114	-	242	15794595	rph	NMA1702	-	ribonuclease PH
1549	 55.91	0	1633196..1633660	-	154	15794596	-	NMA1703	-	hypothetical protein
1550	 56.37	0	1633877..1634653	+	258	15794597	-	NMA1704	-	hypothetical protein
1551	 54.39	0	1634898..1635752	+	284	15794598	-	NMA1705	-	hypothetical protein
1552	 55.63	0	1635742..1637001	+	419	15794599	pncB	NMA1706	-	nicotinate phosphoribosyltransferase
1553	 56.95	0	1637093..1638811	+	572	15794600	argS	NMA1707	-	arginyl-tRNA synthetase
1554	 56.03	0	1639365..1640783	+	472	15794601	-	NMA1708	-	hypothetical protein
1555	 55.29	0	1641720..1642466	-	248	15794602	-	NMA1709	-	binding-protein-dependent transport systems inner membrane protein
1556	 59.12	+1	1642645..1643346	-	233	15794603	-	NMA1710	-	nuclease
1557	 51.64	0	1643385..1644056	-	223	15794604	rpiA	NMA1711	-	ribose-5-phosphate isomerase A
1558	 56.31	0	1644133..1644615	-	160	15794605	ispF	NMA1712	-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
1559	 57.83	0	1644647..1645336	-	229	15794606	-	NMA1713	-	hypothetical protein
1560	 58.64	0	1645333..1646067	-	244	15794607	dnaQ	NMA1714	-	DNA polymerase III, epsilon chain
1561	 52.71	0	1646223..1647533	-	436	15794608	-	NMA1715	-	integral membrane protein
1562	 46.56	0	1647523..1647711	-	62	15794609	-	NMA1716	-	inner membrane protein
1563	 49.67	0	1647708..1648007	-	99	15794610	-	NMA1717	-	hypothetical protein
1564	 57.70	0	1648328..1649554	+	408	15794611	ackA1	NMA1718	-	acetate kinase
1565	 55.27	0	1650068..1651909	-	613	15794612	dipZ	NMA1719	-	thiol:disulfide interchange protein precursor
1566	 57.11	0	1652000..1652470	+	156	15794613	-	NMA1720	-	hypothetical protein
1567	 55.35	0	1652541..1653371	-	276	15794614	-	NMA1721	-	transferase
1568	 54.24	0	1653440..1653922	-	160	15794615	-	NMA1722	-	peptidyl-prolyl isomerase
1569	 59.46	+1	1654411..1654743	+	110	15794616	-	NMA1723	-	hypothetical protein
1570	 52.05	0	1654801..1656168	+	455	15794617	-	NMA1724	-	hypothetical protein
1571	 40.75	-1	1656349..1658277	-	642	15794618	-	NMA1725	-	virulence associated protein
1572	 46.80	0	1658738..1659190	-	150	15794619	smpB	NMA1726	-	SsrA-binding protein
1573	 54.01	0	1659239..1660249	-	336	15794620	rfaF	NMA1727	-	ADP-heptose:LPS heptosyltransferase II
1574	 55.40	0	1660646..1661515	-	289	15794621	-	NMA1728	-	methylated-DNA-protein-cysteine methyltransferase
1575	 59.36	+1	1661673..1662233	+	186	15794622	-	NMA1729	-	hypothetical protein
1576	 55.58	0	1663067..1664212	-	381	15794623	dapE	NMA1730	-	succinyl-diaminopimelate desuccinylase
1577	 51.21	0	1664326..1664946	-	206	15794624	-	NMA1731	-	hypothetical protein
1578	 52.55	0	1664980..1665489	-	169	15794625	-	NMA1732	-	hypothetical protein
1579	 53.26	0	1665584..1666135	-	183	15794626	-	NMA1733	-	H.8 outer membrane protein
1580	 55.32	0	1666416..1666838	-	140	15794627	-	NMA1734	-	hypothetical protein
1581	 54.82	0	1666969..1669719	+	916	15794628	secA	NMA1735	-	preprotein translocase subunit SecA
1582	 52.74	0	1669864..1671636	+	590	15794629	dnaG	NMA1736	-	DNA primase
1583	 51.94	0	1671823..1673751	+	642	15794630	rpoD	NMA1737	-	RNA polymerase sigma factor RpoD
1584	 52.11	0	1673919..1674770	+	283	15794631	-	NMA1738	-	insertion element IS1106 transposase
1585	 53.23	0	1676324..1679158	-	944	15794632	lbpA	NMA1739	-	lactoferrin binding protein A
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.