IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1458	 61.50	+1	1518110..1518748	+	212	15794505	eda	NMA1611	-	keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
1459	 54.32	0	1519005..1519757	-	250	15794506	-	NMA1612	-	zinc-binding alcohol dehydrogenase
1460	 48.63	0	1519906..1520088	-	60	15794507	-	NMA1613	-	dehydrogenase fragment
1461	 55.43	0	1520242..1521291	+	349	15794508	mutY	NMA1614	-	adenine glycosylase
1462	 38.10	-1	1521306..1521473	+	55	15794509	-	NMA1615	-	hypothetical protein
1463	 32.79	-2	1521454..1521636	+	60	15794510	-	NMA1616	-	hypothetical protein
1464	 43.32	-1	1521708..1522268	+	186	15794511	sodC	NMA1617	-	superoxide dismutase
1465	 52.92	0	1522627..1523310	-	227	15794512	-	NMA1618	-	insertion element IS1106 transposase
1466	 56.10	0	1523265..1523633	-	122	15794513	-	NMA1619	-	insertion element IS1106 transposase
1467	 52.58	0	1523857..1526085	-	742	15794514	-	NMA1620	-	cytolysin secretion ABC transporter
1468	 46.85	0	1526885..1527424	-	179	15794515	-	NMA1621	-	IS1016 transposase
1469	 27.82	-2	1527761..1528195	+	144	15794516	-	NMA1622	-	hypothetical protein
1470	 43.69	-1	1528206..1528427	+	73	15794517	-	NMA1623	-	hypothetical protein
1471	 22.50	-2	1528462..1529190	+	242	15794518	-	NMA1624	-	integral membrane protein
1472	 44.35	-1	1529177..1530229	+	350	15794519	-	NMA1625	-	RTX family exoprotein
1473	 45.51	0	1530284..1532377	+	697	15794520	-	NMA1626	-	RTX-family exoprotein
1474	 56.72	0	1532719..1535322	-	867	15794521	pepN	NMA1627	-	aminopeptidase N
1475	 52.83	0	1535458..1536252	-	264	15794522	-	NMA1628	-	hypothetical protein
1476	 49.23	0	1536368..1536562	-	64	15794523	-	NMA1629	-	DNA-binding protein
1477	 51.03	0	1537001..1537870	-	289	15794524	-	NMA1630	-	lipid A biosynthesis lauroyl acyltransferase
1478	 59.40	+1	1537921..1538457	-	178	161353791	ruvC	NMA1631	-	Holliday junction resolvase
1479	 48.75	0	1538460..1538699	-	79	15794526	fis	NMA1632	-	factor-for-inversion-stimulation protein
1480	 57.37	0	1538729..1539739	-	336	15794527	-	NMA1633	-	hypothetical protein
1481	 58.88	+1	1540105..1541478	+	457	15794528	-	NMA1634	-	ATP-dependent RNA helicase
1482	 50.71	0	1542053..1543180	+	375	15794529	-	NMA1635	-	hypothetical protein
1483	 52.90	0	1543210..1544088	+	292	15794530	-	NMA1636	-	hypothetical protein
1484	 53.25	0	1544092..1544322	+	76	15794531	-	NMA1637	-	hypothetical protein
1485	 54.83	0	1544506..1546017	-	503	15794532	lysS	NMA1638	-	lysyl-tRNA synthetase
1486	 53.27	0	1546172..1547425	-	417	15794533	-	NMA1639	-	integral membrane protein
1487	 60.00	+1	1547699..1549678	+	659	15794534	-	NMA1640	-	aminopeptidase
1488	 51.09	0	1550999..1551820	-	273	15794535	-	NMA1641	-	insertion element IS1106 transposase
1489	 52.27	0	1552433..1553620	-	395	15794536	porA	NMA1642	-	porin, class I outer membrane protein
1490	 53.04	0	1556634..1557110	-	158	15794537	greA	NMA1643	-	transcription elongation factor
1491	 57.91	0	1557502..1558803	+	433	15794538	aroA	NMA1644	-	3-phosphoshikimate 1-carboxyvinyltransferase
1492	 58.05	0	1558846..1559379	-	177	15794539	-	NMA1645	-	lipoprotein
1493	 57.03	0	1559588..1561165	-	525	15794540	-	NMA1646	-	phopholipase D-family protein
1494	 53.05	0	1561226..1562767	-	513	15794541	-	NMA1647	-	integral membrane protein
1495	 55.38	0	1562916..1563695	+	259	15794542	-	NMA1648	-	hypothetical protein
1496	 53.56	0	1563692..1564393	+	233	15794543	-	NMA1649	-	hypothetical protein
1497	 53.95	0	1564390..1565844	+	484	15794544	-	NMA1650	-	iron-sulphur protein
1498	 57.41	0	1566027..1566512	-	161	15794545	purE	NMA1651	-	phosphoribosylaminoimidazole carboxylase catalytic subunit
1499	 55.23	0	1566560..1567276	-	238	15794546	-	NMA1652	-	periplasmic protein
1500	 55.01	0	1567276..1567944	-	222	15794547	-	NMA1653	-	methyltransferase
1501	 45.16	0	1567955..1568140	-	61	15794548	-	NMA1654	-	hypothetical protein
1502	 58.47	0	1568283..1570259	+	658	15794549	mutL	NMA1655	-	DNA mismatch repair protein
1503	 58.26	0	1570354..1572483	+	709	15794550	dnaZX	NMA1656	-	DNA polymerase III subunits gamma and tau
1504	 52.98	0	1572563..1572898	+	111	15794551	-	NMA1657	-	hypothetical protein
1505	 56.26	0	1574167..1575213	-	348	15794552	recA	NMA1658	-	recombinase A
1506	 57.89	0	1575434..1576231	+	265	15794553	aroD	NMA1659	-	3-dehydroquinate dehydratase
1507	 53.32	0	1576251..1578266	+	671	15794554	rep	NMA1660	-	ATP-dependent DNA helicase
1508	 57.03	0	1578334..1579392	-	352	15794555	-	NMA1661	-	impB/mucB/samB family protein
1509	 51.68	0	1579640..1580833	-	397	15794556	-	NMA1662	-	hypothetical protein
1510	 50.52	0	1580869..1582776	-	635	15794557	-	NMA1663	-	hypothetical protein
1511	 52.69	0	1583002..1583781	+	259	15794558	-	NMA1664	-	ferredoxin NADP+ reductase
1512	 48.48	0	1583992..1585404	-	470	15794559	-	NMA1665	-	DNA polymerase III subunit
1513	 51.96	0	1586222..1587397	+	391	15794560	-	NMA1666	-	hypothetical protein
1514	 54.10	0	1587457..1588005	-	182	15794561	-	NMA1667	-	inner membrane protein
1515	 53.77	0	1588008..1589504	-	498	15794562	-	NMA1668	-	ferredoxin
1516	 55.45	0	1590031..1592010	+	659	15794563	tkt	NMA1669	-	transketolase
1517	 57.52	0	1592151..1593539	+	462	15794564	fumC	NMA1670	-	fumarate hydratase
1518	 55.74	0	1593604..1594527	-	307	15794565	-	NMA1671	-	hypothetical protein
1519	 58.67	0	1594899..1595423	-	174	15794566	ssb	NMA1672	-	single-stranded binding protein
1520	 57.43	0	1595427..1596812	-	461	15794567	-	NMA1673	-	integral membrane transporter
1521	 59.29	+1	1596920..1597543	-	207	15794568	-	NMA1674	-	transglycosylase
1522	 48.92	0	1598453..1598869	-	138	15794569	-	NMA1675	-	hypothetical protein
1523	 61.29	+1	1600962..1601054	+	30	15794570	-	NMA1677a	-	hypothetical protein
1524	 54.39	0	1601254..1601709	+	151	15794571	-	NMA1678	-	hypothetical protein
1525	 55.67	0	1601826..1603334	+	502	15794572	ppx/gppA	NMA1679	-	exopolyphosphatase
1526	 51.79	0	1603495..1603857	+	120	15794573	-	NMA1680	-	membrane protein
1527	 58.19	0	1604187..1604528	-	113	15794574	-	NMA1681	-	hypothetical protein
1528	 54.20	0	1604534..1605544	-	336	15794575	trpS	NMA1682	-	tryptophanyl-tRNA synthetase
1529	 52.95	0	1605805..1608384	+	859	15794576	clpB	NMA1683	-	ClpB protein
1530	 53.17	0	1608471..1609685	-	404	15794577	-	NMA1684	-	aminotransferase AlaT
1531	 53.81	0	1609774..1609983	-	69	15794578	-	NMA1685	-	tautomerase
1532	 54.28	0	1610328..1611134	+	268	15794579	-	NMA1686	-	hypothetical protein
1533	 52.76	0	1611192..1612457	-	421	15794580	-	NMA1687	-	glutamate dehydrogenase
1534	 56.50	0	1612864..1613571	+	235	15794581	-	NMA1688	-	phosphoglycolate phosphatase
1535	 53.90	0	1613639..1614100	+	153	15794582	recX	NMA1689	-	recombination regulator RecX
1536	 50.93	0	1614120..1614335	+	71	15794583	-	NMA1690	-	hypothetical protein
1537	 55.07	0	1614488..1614970	+	160	15794584	-	NMA1691	-	acyl-CoA hydrolase
1538	 57.85	0	1615331..1616578	-	415	15794585	-	NMA1692	-	membrane peptidase
1539	 56.89	0	1616681..1617427	-	248	15794586	surE	NMA1693	-	SurE protein
1540	 54.46	0	1617444..1619000	-	518	15794587	-	NMA1694	-	hypothetical protein
1541	 53.23	0	1619368..1620156	-	262	15794588	-	NMA1695	-	fimbrial assembly protein
1542	 54.88	0	1620265..1621698	-	477	15794589	gabD	NMA1696	-	succinate semialdehyde dehydrogenase
1543	 59.84	+1	1622362..1622742	-	126	15794590	-	NMA1697	-	lipoprotein
1544	 55.72	0	1623218..1625299	+	693	15794591	-	NMA1698	-	integral membrane protein (CstA-like)
1545	 54.87	0	1625289..1625483	+	64	15794592	-	NMA1699	-	hypothetical protein
1546	 49.87	0	1627036..1629804	+	922	15794593	-	NMA1700	-	outer membrane substrate binding protein
1547	 54.68	0	1630967..1632184	-	405	15794594	lysC	NMA1701	-	aspartate kinase
1548	 55.83	0	1632386..1633114	-	242	15794595	rph	NMA1702	-	ribonuclease PH
1549	 55.91	0	1633196..1633660	-	154	15794596	-	NMA1703	-	hypothetical protein
1550	 56.37	0	1633877..1634653	+	258	15794597	-	NMA1704	-	hypothetical protein
1551	 54.39	0	1634898..1635752	+	284	15794598	-	NMA1705	-	hypothetical protein
1552	 55.63	0	1635742..1637001	+	419	15794599	pncB	NMA1706	-	nicotinate phosphoribosyltransferase
1553	 56.95	0	1637093..1638811	+	572	15794600	argS	NMA1707	-	arginyl-tRNA synthetase
1554	 56.03	0	1639365..1640783	+	472	15794601	-	NMA1708	-	hypothetical protein
1555	 55.29	0	1641720..1642466	-	248	15794602	-	NMA1709	-	binding-protein-dependent transport systems inner membrane protein
1556	 59.12	+1	1642645..1643346	-	233	15794603	-	NMA1710	-	nuclease
1557	 51.64	0	1643385..1644056	-	223	15794604	rpiA	NMA1711	-	ribose-5-phosphate isomerase A
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.