IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1382	 42.57	-1	1430733..1431035	-	100	15794429	priB	NMA1536	-	primosomal replication protein
1383	 47.97	0	1431036..1431404	-	122	15794430	rpsF	NMA1537	-	30S ribosomal protein S6
1384	 54.68	0	1431560..1432510	-	316	15794431	trxB	NMA1538	-	thioredoxin reductase
1385	 55.74	0	1432649..1434826	+	725	15794432	-	NMA1539	-	cation-transporting ATPase
1386	 54.64	0	1434881..1436767	+	628	15794433	uvrC	NMA1540	-	excinuclease ABC subunit C
1387	 54.88	0	1437010..1438443	+	477	15794434	-	NMA1541	-	hypothetical protein
1388	 56.49	0	1438565..1439281	+	238	15794435	trmB	NMA1542	-	tRNA (guanine-N(7))-methyltransferase
1389	 45.77	0	1439484..1440086	+	200	15794436	-	NMA1543	-	IS1016 transposase
1390	 37.39	-2	1440251..1441015	-	254	15794437	-	NMA1544	-	hypothetical protein
1391	 54.34	0	1441083..1443110	-	675	15794438	uvrB	NMA1545	-	excinuclease ABC subunit B
1392	 52.66	0	1443439..1444923	-	494	15794439	-	NMA1546	-	carboxy-terminal processing protease
1393	 51.88	0	1445043..1446848	-	601	15794440	-	NMA1547	-	hypothetical protein
1394	 46.79	0	1446921..1447076	-	51	15794441	-	NMA1548	-	hypothetical protein
1395	 52.41	0	1447176..1447736	+	186	15794442	-	NMA1549	-	lipoprotein
1396	 53.73	0	1447738..1448286	+	182	15794443	-	NMA1550	-	hypothetical protein
1397	 57.68	0	1448279..1448734	+	151	15794444	-	NMA1551	-	Holliday junction resolvase-like protein
1398	 51.90	0	1448744..1449400	-	218	15794445	-	NMA1552	-	hydrolase
1399	 55.46	0	1449464..1451176	-	570	15794446	proS	NMA1553	-	prolyl-tRNA synthetase
1400	 54.62	0	1451870..1454533	+	887	15794447	aceE	NMA1554	-	pyruvate dehydrogenase subunit E1
1401	 55.97	0	1454683..1456290	+	535	15794448	aceF	NMA1555	-	dihydrolipoamide acetyltransferase
1402	 53.73	0	1456368..1458152	+	594	15794449	lpdA	NMA1556	-	dihydrolipoamide dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenase complexes)
1403	 47.95	0	1458513..1460051	-	512	15794450	-	NMA1557	-	hypothetical protein
1404	 51.77	0	1460188..1462308	-	706	15794451	-	NMA1558	-	TonB-dependent receptor protein
1405	 52.80	0	1462567..1463352	-	261	15794452	-	NMA1559	-	inositol monophosphate family protein
1406	 55.75	0	1463533..1464411	+	292	15794453	-	NMA1560	-	SpoU methylase family protein
1407	 57.91	0	1464451..1465329	+	292	15794454	-	NMA1561	-	hypothetical protein
1408	 24.85	-2	1465533..1465874	+	113	15794455	-	NMA1562	-	hypothetical protein
1409	 55.37	0	1466222..1467478	+	418	15794456	-	NMA1563	-	SUN-family protein
1410	 50.80	0	1468234..1468668	+	144	15794457	-	NMA1564	-	hypothetical protein
1411	 57.44	0	1468716..1470059	-	447	15794458	-	NMA1565	-	aldehyde dehydrogenase
1412	 57.00	0	1470064..1470777	-	237	15794459	-	NMA1566	-	hypothetical protein
1413	 53.95	0	1470868..1471158	+	96	15794460	gatC	NMA1567	-	aspartyl/glutamyl-tRNA amidotransferase subunit C
1414	 57.19	0	1471221..1472666	+	481	15794461	gatA	NMA1568	-	Glu-tRNA(Gln) amidotransferase subunit A
1415	 52.30	0	1472663..1473595	+	310	15794462	-	NMA1569	-	hypothetical protein
1416	 53.60	0	1473638..1475068	+	476	15794463	gatB	NMA1570	-	aspartyl/glutamyl-tRNA amidotransferase subunit B
1417	 55.29	0	1475160..1476170	+	336	15794464	-	NMA1571	-	iron/sulphur-binding oxidoreductase
1418	 57.35	0	1476300..1476932	-	210	15794465	pdxH	NMA1572	-	pyridoxamine 5'-phosphate oxidase
1419	 60.18	+1	1477432..1478202	+	256	15794466	-	NMA1573	-	pseudouridine synthase
1420	 56.81	0	1478271..1479812	-	513	15794467	-	NMA1574	-	integral membrane transporter
1421	 56.49	0	1481025..1482380	-	451	15794468	xseA	NMA1575	-	exodeoxyribonuclease VII large subunit
1422	 57.18	0	1482577..1483398	+	273	15794469	nadE	NMA1576	-	NH(3)-dependent NAD synthetase
1423	 50.42	0	1483468..1483941	-	157	15794470	-	NMA1577	-	hypothetical protein
1424	 56.46	0	1484244..1484576	+	110	15794471	trxA	NMA1578	-	thioredoxin I
1425	 51.48	0	1484629..1485576	-	315	15794472	-	NMA1579	-	hypothetical protein
1426	 55.51	0	1485904..1487292	+	462	15794473	-	NMA1580	-	ATP-dependent RNA helicase
1427	 61.62	+1	1487937..1488491	-	184	15794474	-	NMA1581	-	membrane lipoprotein
1428	 55.08	0	1488576..1489136	-	186	15794475	-	NMA1582	-	hypothetical protein
1429	 37.72	-1	1489302..1489415	-	37	15794476	-	NMA1583	-	hypothetical protein
1430	 57.87	0	1489480..1490673	+	397	15794477	argD	NMA1584	-	bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
1431	 51.65	0	1490738..1491982	-	414	15794478	clpX	NMA1585	-	ATP-dependent protease ATP-binding subunit
1432	 55.11	0	1492173..1492544	+	123	15794479	rbfA	NMA1586	-	ribosome-binding factor A
1433	 38.46	-1	1492534..1493079	+	181	15794480	-	NMA1587	-	hypothetical protein
1434	 57.76	0	1493137..1494057	+	306	15794481	truB	NMA1588	-	tRNA pseudouridine synthase B
1435	 39.91	-1	1494377..1494817	+	146	15794482	-	NMA1589	-	hypothetical protein
1436	 33.13	-2	1495045..1496523	+	492	15794483	-	NMA1590	-	type III restriction/modification system modification methylase
1437	 38.12	-1	1496471..1499293	+	940	15794484	-	NMA1591	-	type III restriction/modification system enzyme
1438	 52.17	0	1499437..1500609	-	390	15794485	lldA	NMA1592	-	L-lactate dehydrogenase
1439	 58.39	0	1500899..1501345	+	148	15794486	-	NMA1593	-	hypothetical protein
1440	 55.39	0	1501374..1502588	+	404	15794487	-	NMA1594	-	NifS-like aminotranfserase
1441	 51.16	0	1502655..1502783	+	42	15794488	-	NMA1595	-	hypothetical protein
1442	 52.71	0	1502849..1503235	+	128	15794489	-	NMA1596	-	scaffold protein
1443	 49.84	0	1503322..1503642	+	106	15794490	-	NMA1597	-	HesB-like protein
1444	 52.30	0	1503905..1504405	+	166	15794491	hscB	NMA1598	-	chaperone protein
1445	 54.85	0	1504503..1507253	+	916	15794492	gyrA	NMA1599	-	DNA gyrase subunit A
1446	 37.04	-2	1507410..1507814	+	134	15794493	-	NMA1600	-	transposase
1447	 40.00	-1	1508017..1508091	+	24	15794494	-	NMA1601	-	putative transposase
1448	 44.30	-1	1508092..1508328	+	78	15794495	-	NMA1601a	-	putative transposase
1449	 45.10	0	1508325..1508528	+	67	15794496	-	NMA1601b	-	putative transposase
1450	 47.75	0	1508674..1508784	-	36	15794497	-	NMA1602	-	hypothetical protein
1451	 50.18	0	1508859..1509410	-	183	15794498	-	NMA1603	-	hypothetical protein
1452	 55.43	0	1509424..1511070	-	548	15794499	pgi	NMA1604	-	glucose-6-phosphate isomerase
1453	 56.07	0	1511191..1512039	-	282	15794500	-	NMA1605	-	transcriptional regulator
1454	 57.04	0	1512089..1513075	-	328	15794501	glk	NMA1607	-	glucokinase
1455	 53.59	0	1513056..1513751	-	231	15794502	pgl	NMA1608	-	6-phosphogluconolactonase
1456	 52.07	0	1514031..1515476	-	481	15794503	zwf	NMA1609	-	glucose-6-phosphate 1-dehydrogenase
1457	 57.46	0	1516094..1517929	+	611	161353792	edd	NMA1610	-	phosphogluconate dehydratase
1458	 61.50	+1	1518110..1518748	+	212	15794505	eda	NMA1611	-	keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
1459	 54.32	0	1519005..1519757	-	250	15794506	-	NMA1612	-	zinc-binding alcohol dehydrogenase
1460	 48.63	0	1519906..1520088	-	60	15794507	-	NMA1613	-	dehydrogenase fragment
1461	 55.43	0	1520242..1521291	+	349	15794508	mutY	NMA1614	-	adenine glycosylase
1462	 38.10	-1	1521306..1521473	+	55	15794509	-	NMA1615	-	hypothetical protein
1463	 32.79	-2	1521454..1521636	+	60	15794510	-	NMA1616	-	hypothetical protein
1464	 43.32	-1	1521708..1522268	+	186	15794511	sodC	NMA1617	-	superoxide dismutase
1465	 52.92	0	1522627..1523310	-	227	15794512	-	NMA1618	-	insertion element IS1106 transposase
1466	 56.10	0	1523265..1523633	-	122	15794513	-	NMA1619	-	insertion element IS1106 transposase
1467	 52.58	0	1523857..1526085	-	742	15794514	-	NMA1620	-	cytolysin secretion ABC transporter
1468	 46.85	0	1526885..1527424	-	179	15794515	-	NMA1621	-	IS1016 transposase
1469	 27.82	-2	1527761..1528195	+	144	15794516	-	NMA1622	-	hypothetical protein
1470	 43.69	-1	1528206..1528427	+	73	15794517	-	NMA1623	-	hypothetical protein
1471	 22.50	-2	1528462..1529190	+	242	15794518	-	NMA1624	-	integral membrane protein
1472	 44.35	-1	1529177..1530229	+	350	15794519	-	NMA1625	-	RTX family exoprotein
1473	 45.51	0	1530284..1532377	+	697	15794520	-	NMA1626	-	RTX-family exoprotein
1474	 56.72	0	1532719..1535322	-	867	15794521	pepN	NMA1627	-	aminopeptidase N
1475	 52.83	0	1535458..1536252	-	264	15794522	-	NMA1628	-	hypothetical protein
1476	 49.23	0	1536368..1536562	-	64	15794523	-	NMA1629	-	DNA-binding protein
1477	 51.03	0	1537001..1537870	-	289	15794524	-	NMA1630	-	lipid A biosynthesis lauroyl acyltransferase
1478	 59.40	+1	1537921..1538457	-	178	161353791	ruvC	NMA1631	-	Holliday junction resolvase
1479	 48.75	0	1538460..1538699	-	79	15794526	fis	NMA1632	-	factor-for-inversion-stimulation protein
1480	 57.37	0	1538729..1539739	-	336	15794527	-	NMA1633	-	hypothetical protein
1481	 58.88	+1	1540105..1541478	+	457	15794528	-	NMA1634	-	ATP-dependent RNA helicase
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.