IslandPathversion 1.0

IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 51.77 STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1317	 50.42	0	1355589..1356068	-	159	15794364	-	NMA1462	-	hypothetical protein
1318	 60.06	+1	1356143..1356505	+	120	15794365	-	NMA1463	-	hypothetical protein
1319	 54.67	0	1356537..1357403	+	288	15794366	-	NMA1464	-	hypothetical protein
1320	 53.33	0	1357496..1358455	+	319	15794367	-	NMA1465	-	hypothetical protein
1321	 48.30	0	1358548..1361487	-	979	15794368	-	NMA1466	-	type III restriction-modification system endonuclease protein
1322	 43.14	-1	1363469..1363570	-	33	15794369	-	NMA1468	-	hypothetical protein
1323	 52.15	0	1363554..1364111	-	185	15794370	ppiA	NMA1469	-	peptidyl-prolyl cis-trans isomerase A
1324	 53.83	0	1364176..1365102	-	308	15794371	-	NMA1470	-	hypothetical protein
1325	 54.51	0	1365090..1365566	-	158	15794372	-	NMA1471	-	cation uptake regulator
1326	 53.95	0	1365637..1366092	-	151	15794373	-	NMA1472	-	protein-tyrosine-phosphatase
1327	 41.76	-1	1366217..1367332	-	371	15794374	-	NMA1473	-	hypothetical protein
1328	 56.38	0	1367446..1368543	-	365	15794375	-	NMA1474	-	hypothetical protein
1329	 50.06	0	1368626..1370257	-	543	15794376	-	NMA1475	-	hypothetical protein
1330	 53.33	0	1370357..1370641	-	94	15794377	-	NMA1476	-	mercuric ion binding protein
1331	 56.85	0	1371201..1372637	+	478	15794378	-	NMA1478	-	polysaccharide modification protein
1332	 55.39	0	1372648..1373631	+	327	15794379	-	NMA1479	-	periplasmic protein
1333	 61.14	+1	1373628..1374821	+	397	15794380	-	NMA1480	-	periplasmic protein
1334	 51.04	0	1375082..1376047	-	321	15794381	-	NMA1481	-	IS1655 transposase
1335	 54.44	0	1376191..1377744	+	517	15794382	-	NMA1482	-	acyl-CoA synthetase
1336	 51.54	0	1377835..1379817	-	660	15794383	-	NMA1483	-	transmembrane transport protein
1337	 42.22	-1	1379869..1380003	-	44	15794384	-	NMA1484	-	hypothetical protein
1338	 57.15	0	1380151..1382157	+	668	15794385	gcr	NMA1485	-	site-specific recombinase
1339	 51.04	0	1382368..1383333	+	321	15794386	-	NMA1486	-	IS1655 transposase
1340	 46.97	0	1383398..1383991	+	197	15794387	-	NMA1487	-	IS1016 transposase
1341	 54.38	0	1384238..1385230	-	330	15794388	mltB	NMA1488	-	murein hydrolase
1342	 57.94	0	1385256..1385507	-	83	15794389	-	NMA1489	-	hypothetical protein
1343	 55.79	0	1385549..1387102	-	517	15794390	-	NMA1490	-	oxidoreductase
1344	 55.98	0	1387161..1391051	+	1296	15794391	mfd	NMA1491	-	transcription-repair coupling factor
1345	 52.60	0	1391200..1391583	+	127	15794392	panD	NMA1492	-	aspartate alpha-decarboxylase
1346	 51.60	0	1391605..1392447	+	280	15794393	kdsA	NMA1493	-	2-dehydro-3-deoxyphosphooctonate aldolase
1347	 53.97	0	1392462..1392902	+	146	15794394	-	NMA1494	-	hypothetical protein
1348	 54.93	0	1392950..1394236	+	428	15794395	eno	NMA1495	-	phosphopyruvate hydratase
1349	 48.39	0	1394250..1394528	+	92	15794396	-	NMA1496	-	hypothetical protein
1350	 54.64	0	1394569..1394859	-	96	15794397	-	NMA1497	-	iron-sulphur binding protein
1351	 47.80	0	1395057..1396190	-	377	15794398	nrdB	NMA1498	-	ribonucleotide-diphosphate reductase subunit beta
1352	 31.65	-2	1396251..1397438	-	395	15794399	-	NMA1499	-	type-II restriction endonuclease
1353	 32.94	-2	1397431..1398444	-	337	15794400	-	NMA1500	-	modification methylase
1354	 52.72	0	1398502..1400781	-	759	15794401	nrdA	NMA1501	-	ribonucleotide-diphosphate reductase subunit alpha
1355	 54.17	0	1401310..1401621	+	103	15794402	-	NMA1503	-	hypothetical protein
1356	 55.21	0	1401933..1402700	-	255	15794403	plsC	NMA1504	-	1-acyl-SN-glycerol-3-phosphate acyltransferase
1357	 54.71	0	1402788..1403615	-	275	15794404	fpg	NMA1505	-	formamidopyrimidine-DNA glycosylase
1358	 55.26	0	1403667..1404332	-	221	15794405	-	NMA1506	-	hypothetical protein
1359	 56.80	0	1404510..1406486	+	658	15794406	-	NMA1507	-	membrane bound murein transglycosylase
1360	 51.23	0	1406554..1407246	+	230	15794407	-	NMA1508	-	ribosomal small subunit pseudouridine synthase
1361	 56.16	0	1409433..1410089	+	218	15794408	cmk	NMA1514	-	cytidylate kinase
1362	 50.83	0	1410244..1411929	+	561	15794409	rpsA	NMA1515	-	30S ribosomal protein S1
1363	 49.84	0	1411940..1412254	+	104	15794410	hip	NMA1516	-	integration host factor beta-subunit
1364	 40.69	-1	1412605..1413012	-	135	15794411	-	NMA1517	-	transcriptional regulator
1365	 47.76	0	1413133..1414269	+	378	15794412	adhC	NMA1518	-	alcohol dehydrogenase class-III
1366	 46.38	0	1414278..1415105	+	275	15794413	esd	NMA1519	-	esterase D
1367	 52.34	0	1415498..1416649	+	383	15794414	-	NMA1520	-	nucleotide-binding protein
1368	 50.47	0	1416708..1417133	+	141	15794415	ndk	NMA1521	-	nucleoside diphosphate kinase
1369	 51.51	0	1417277..1418371	+	364	15794416	-	NMA1522	-	hypothetical protein
1370	 51.97	0	1418374..1419135	+	253	15794417	-	NMA1523	-	lipoprotein
1371	 52.45	0	1419151..1420416	+	421	15794418	ispG	NMA1524	-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1372	 49.27	0	1420469..1421083	-	204	15794419	clpP	NMA1525	-	endopeptidase
1373	 49.09	0	1421179..1422492	-	437	15794420	tig	NMA1526	-	trigger factor
1374	 54.95	0	1422697..1425000	-	767	15794421	-	NMA1527	-	ftsK-like cell division/stress response protein
1375	 55.36	0	1425358..1426569	+	403	15794422	uraA	NMA1528	-	uracil permease
1376	 51.55	0	1426621..1427103	-	160	15794423	-	NMA1529	-	hypothetical protein
1377	 56.99	0	1427427..1427612	+	61	15794424	-	NMA1531	-	hypothetical protein
1378	 55.96	0	1427686..1428432	+	248	15794425	pss	NMA1532	-	phosphatidylserine synthase
1379	 55.14	0	1428433..1429239	+	268	15794426	-	NMA1533	-	hypothetical protein
1380	 51.43	0	1430027..1430479	-	150	15794427	rplI	NMA1534	-	50S ribosomal protein L9
1381	 44.16	-1	1430496..1430726	-	76	15794428	rpsR	NMA1535	-	30S ribosomal protein S18
1382	 42.57	-1	1430733..1431035	-	100	15794429	priB	NMA1536	-	primosomal replication protein
1383	 47.97	0	1431036..1431404	-	122	15794430	rpsF	NMA1537	-	30S ribosomal protein S6
1384	 54.68	0	1431560..1432510	-	316	15794431	trxB	NMA1538	-	thioredoxin reductase
1385	 55.74	0	1432649..1434826	+	725	15794432	-	NMA1539	-	cation-transporting ATPase
1386	 54.64	0	1434881..1436767	+	628	15794433	uvrC	NMA1540	-	excinuclease ABC subunit C
1387	 54.88	0	1437010..1438443	+	477	15794434	-	NMA1541	-	hypothetical protein
1388	 56.49	0	1438565..1439281	+	238	15794435	trmB	NMA1542	-	tRNA (guanine-N(7))-methyltransferase
1389	 45.77	0	1439484..1440086	+	200	15794436	-	NMA1543	-	IS1016 transposase
1390	 37.39	-2	1440251..1441015	-	254	15794437	-	NMA1544	-	hypothetical protein
1391	 54.34	0	1441083..1443110	-	675	15794438	uvrB	NMA1545	-	excinuclease ABC subunit B
1392	 52.66	0	1443439..1444923	-	494	15794439	-	NMA1546	-	carboxy-terminal processing protease
1393	 51.88	0	1445043..1446848	-	601	15794440	-	NMA1547	-	hypothetical protein
1394	 46.79	0	1446921..1447076	-	51	15794441	-	NMA1548	-	hypothetical protein
1395	 52.41	0	1447176..1447736	+	186	15794442	-	NMA1549	-	lipoprotein
1396	 53.73	0	1447738..1448286	+	182	15794443	-	NMA1550	-	hypothetical protein
1397	 57.68	0	1448279..1448734	+	151	15794444	-	NMA1551	-	Holliday junction resolvase-like protein
1398	 51.90	0	1448744..1449400	-	218	15794445	-	NMA1552	-	hydrolase
1399	 55.46	0	1449464..1451176	-	570	15794446	proS	NMA1553	-	prolyl-tRNA synthetase
1400	 54.62	0	1451870..1454533	+	887	15794447	aceE	NMA1554	-	pyruvate dehydrogenase subunit E1
1401	 55.97	0	1454683..1456290	+	535	15794448	aceF	NMA1555	-	dihydrolipoamide acetyltransferase
1402	 53.73	0	1456368..1458152	+	594	15794449	lpdA	NMA1556	-	dihydrolipoamide dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenase complexes)
1403	 47.95	0	1458513..1460051	-	512	15794450	-	NMA1557	-	hypothetical protein
1404	 51.77	0	1460188..1462308	-	706	15794451	-	NMA1558	-	TonB-dependent receptor protein
1405	 52.80	0	1462567..1463352	-	261	15794452	-	NMA1559	-	inositol monophosphate family protein
1406	 55.75	0	1463533..1464411	+	292	15794453	-	NMA1560	-	SpoU methylase family protein
1407	 57.91	0	1464451..1465329	+	292	15794454	-	NMA1561	-	hypothetical protein
1408	 24.85	-2	1465533..1465874	+	113	15794455	-	NMA1562	-	hypothetical protein
1409	 55.37	0	1466222..1467478	+	418	15794456	-	NMA1563	-	SUN-family protein
1410	 50.80	0	1468234..1468668	+	144	15794457	-	NMA1564	-	hypothetical protein
1411	 57.44	0	1468716..1470059	-	447	15794458	-	NMA1565	-	aldehyde dehydrogenase
1412	 57.00	0	1470064..1470777	-	237	15794459	-	NMA1566	-	hypothetical protein
1413	 53.95	0	1470868..1471158	+	96	15794460	gatC	NMA1567	-	aspartyl/glutamyl-tRNA amidotransferase subunit C
1414	 57.19	0	1471221..1472666	+	481	15794461	gatA	NMA1568	-	Glu-tRNA(Gln) amidotransferase subunit A
1415	 52.30	0	1472663..1473595	+	310	15794462	-	NMA1569	-	hypothetical protein
1416	 53.60	0	1473638..1475068	+	476	15794463	gatB	NMA1570	-	aspartyl/glutamyl-tRNA amidotransferase subunit B
51.77	MEAN

7.09	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.