IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1297	 56.99	0	1332793..1333164	+	123	15794344	-	NMA1439	-	lipoprotein
1298	 53.97	0	1333237..1334646	+	469	15794345	thrC	NMA1440	-	threonine synthase
1299	 56.35	0	1334693..1335487	+	264	15794346	-	NMA1441	-	hypothetical protein
1300	 51.48	0	1335675..1336451	+	258	15794347	fpr	NMA1442	-	ferredoxin--NADP reductase
1301	 30.25	-2	1336758..1336919	+	53	15794348	-	NMA1443	-	hypothetical protein
1302	 58.78	0	1337108..1339579	-	823	15794349	-	NMA1444	-	P-type cation-transporting ATPase
1303	 57.75	0	1339576..1340685	-	369	15794350	-	NMA1445	-	hypothetical protein
1304	 56.83	0	1340759..1342039	-	426	15794351	-	NMA1446	-	periplasmic protein
1305	 52.20	0	1342192..1342917	-	241	15794352	-	NMA1447	-	hypothetical protein
1306	 56.64	0	1342990..1343667	-	225	15794353	radC	NMA1448	-	DNA repair protein RadC
1307	 52.89	0	1343790..1345139	-	449	15794354	gshA	NMA1449	-	glutamate--cysteine ligase
1308	 56.95	0	1345395..1346804	+	469	15794355	leuC	NMA1450	-	isopropylmalate isomerase large subunit
1309	 58.43	0	1346901..1347155	+	84	15794356	-	NMA1451	-	lipoprotein
1310	 53.12	0	1347217..1347858	+	213	15794357	leuD	NMA1452	-	isopropylmalate isomerase small subunit
1311	 40.33	-1	1348033..1349304	+	423	15794358	-	NMA1453	-	DNA modification methylase
1312	 53.59	0	1350085..1351155	+	356	15794359	leuB	NMA1456	-	3-isopropylmalate dehydrogenase
1313	 52.84	0	1351318..1351881	+	187	15794360	-	NMA1457	-	periplasmic protein
1314	 52.58	0	1352342..1353739	+	465	15794361	aspA	NMA1459	-	aspartate ammonia-lyase
1315	 51.94	0	1353811..1354686	-	291	15794362	-	NMA1460	-	integral membrane protein
1316	 54.50	0	1354688..1355410	-	240	15794363	-	NMA1461	-	dnaJ-family protein
1317	 50.42	0	1355589..1356068	-	159	15794364	-	NMA1462	-	hypothetical protein
1318	 60.06	+1	1356143..1356505	+	120	15794365	-	NMA1463	-	hypothetical protein
1319	 54.67	0	1356537..1357403	+	288	15794366	-	NMA1464	-	hypothetical protein
1320	 53.33	0	1357496..1358455	+	319	15794367	-	NMA1465	-	hypothetical protein
1321	 48.30	0	1358548..1361487	-	979	15794368	-	NMA1466	-	type III restriction-modification system endonuclease protein
1322	 43.14	-1	1363469..1363570	-	33	15794369	-	NMA1468	-	hypothetical protein
1323	 52.15	0	1363554..1364111	-	185	15794370	ppiA	NMA1469	-	peptidyl-prolyl cis-trans isomerase A
1324	 53.83	0	1364176..1365102	-	308	15794371	-	NMA1470	-	hypothetical protein
1325	 54.51	0	1365090..1365566	-	158	15794372	-	NMA1471	-	cation uptake regulator
1326	 53.95	0	1365637..1366092	-	151	15794373	-	NMA1472	-	protein-tyrosine-phosphatase
1327	 41.76	-1	1366217..1367332	-	371	15794374	-	NMA1473	-	hypothetical protein
1328	 56.38	0	1367446..1368543	-	365	15794375	-	NMA1474	-	hypothetical protein
1329	 50.06	0	1368626..1370257	-	543	15794376	-	NMA1475	-	hypothetical protein
1330	 53.33	0	1370357..1370641	-	94	15794377	-	NMA1476	-	mercuric ion binding protein
1331	 56.85	0	1371201..1372637	+	478	15794378	-	NMA1478	-	polysaccharide modification protein
1332	 55.39	0	1372648..1373631	+	327	15794379	-	NMA1479	-	periplasmic protein
1333	 61.14	+1	1373628..1374821	+	397	15794380	-	NMA1480	-	periplasmic protein
1334	 51.04	0	1375082..1376047	-	321	15794381	-	NMA1481	-	IS1655 transposase
1335	 54.44	0	1376191..1377744	+	517	15794382	-	NMA1482	-	acyl-CoA synthetase
1336	 51.54	0	1377835..1379817	-	660	15794383	-	NMA1483	-	transmembrane transport protein
1337	 42.22	-1	1379869..1380003	-	44	15794384	-	NMA1484	-	hypothetical protein
1338	 57.15	0	1380151..1382157	+	668	15794385	gcr	NMA1485	-	site-specific recombinase
1339	 51.04	0	1382368..1383333	+	321	15794386	-	NMA1486	-	IS1655 transposase
1340	 46.97	0	1383398..1383991	+	197	15794387	-	NMA1487	-	IS1016 transposase
1341	 54.38	0	1384238..1385230	-	330	15794388	mltB	NMA1488	-	murein hydrolase
1342	 57.94	0	1385256..1385507	-	83	15794389	-	NMA1489	-	hypothetical protein
1343	 55.79	0	1385549..1387102	-	517	15794390	-	NMA1490	-	oxidoreductase
1344	 55.98	0	1387161..1391051	+	1296	15794391	mfd	NMA1491	-	transcription-repair coupling factor
1345	 52.60	0	1391200..1391583	+	127	15794392	panD	NMA1492	-	aspartate alpha-decarboxylase
1346	 51.60	0	1391605..1392447	+	280	15794393	kdsA	NMA1493	-	2-dehydro-3-deoxyphosphooctonate aldolase
1347	 53.97	0	1392462..1392902	+	146	15794394	-	NMA1494	-	hypothetical protein
1348	 54.93	0	1392950..1394236	+	428	15794395	eno	NMA1495	-	phosphopyruvate hydratase
1349	 48.39	0	1394250..1394528	+	92	15794396	-	NMA1496	-	hypothetical protein
1350	 54.64	0	1394569..1394859	-	96	15794397	-	NMA1497	-	iron-sulphur binding protein
1351	 47.80	0	1395057..1396190	-	377	15794398	nrdB	NMA1498	-	ribonucleotide-diphosphate reductase subunit beta
1352	 31.65	-2	1396251..1397438	-	395	15794399	-	NMA1499	-	type-II restriction endonuclease
1353	 32.94	-2	1397431..1398444	-	337	15794400	-	NMA1500	-	modification methylase
1354	 52.72	0	1398502..1400781	-	759	15794401	nrdA	NMA1501	-	ribonucleotide-diphosphate reductase subunit alpha
1355	 54.17	0	1401310..1401621	+	103	15794402	-	NMA1503	-	hypothetical protein
1356	 55.21	0	1401933..1402700	-	255	15794403	plsC	NMA1504	-	1-acyl-SN-glycerol-3-phosphate acyltransferase
1357	 54.71	0	1402788..1403615	-	275	15794404	fpg	NMA1505	-	formamidopyrimidine-DNA glycosylase
1358	 55.26	0	1403667..1404332	-	221	15794405	-	NMA1506	-	hypothetical protein
1359	 56.80	0	1404510..1406486	+	658	15794406	-	NMA1507	-	membrane bound murein transglycosylase
1360	 51.23	0	1406554..1407246	+	230	15794407	-	NMA1508	-	ribosomal small subunit pseudouridine synthase
1361	 56.16	0	1409433..1410089	+	218	15794408	cmk	NMA1514	-	cytidylate kinase
1362	 50.83	0	1410244..1411929	+	561	15794409	rpsA	NMA1515	-	30S ribosomal protein S1
1363	 49.84	0	1411940..1412254	+	104	15794410	hip	NMA1516	-	integration host factor beta-subunit
1364	 40.69	-1	1412605..1413012	-	135	15794411	-	NMA1517	-	transcriptional regulator
1365	 47.76	0	1413133..1414269	+	378	15794412	adhC	NMA1518	-	alcohol dehydrogenase class-III
1366	 46.38	0	1414278..1415105	+	275	15794413	esd	NMA1519	-	esterase D
1367	 52.34	0	1415498..1416649	+	383	15794414	-	NMA1520	-	nucleotide-binding protein
1368	 50.47	0	1416708..1417133	+	141	15794415	ndk	NMA1521	-	nucleoside diphosphate kinase
1369	 51.51	0	1417277..1418371	+	364	15794416	-	NMA1522	-	hypothetical protein
1370	 51.97	0	1418374..1419135	+	253	15794417	-	NMA1523	-	lipoprotein
1371	 52.45	0	1419151..1420416	+	421	15794418	ispG	NMA1524	-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1372	 49.27	0	1420469..1421083	-	204	15794419	clpP	NMA1525	-	endopeptidase
1373	 49.09	0	1421179..1422492	-	437	15794420	tig	NMA1526	-	trigger factor
1374	 54.95	0	1422697..1425000	-	767	15794421	-	NMA1527	-	ftsK-like cell division/stress response protein
1375	 55.36	0	1425358..1426569	+	403	15794422	uraA	NMA1528	-	uracil permease
1376	 51.55	0	1426621..1427103	-	160	15794423	-	NMA1529	-	hypothetical protein
1377	 56.99	0	1427427..1427612	+	61	15794424	-	NMA1531	-	hypothetical protein
1378	 55.96	0	1427686..1428432	+	248	15794425	pss	NMA1532	-	phosphatidylserine synthase
1379	 55.14	0	1428433..1429239	+	268	15794426	-	NMA1533	-	hypothetical protein
1380	 51.43	0	1430027..1430479	-	150	15794427	rplI	NMA1534	-	50S ribosomal protein L9
1381	 44.16	-1	1430496..1430726	-	76	15794428	rpsR	NMA1535	-	30S ribosomal protein S18
1382	 42.57	-1	1430733..1431035	-	100	15794429	priB	NMA1536	-	primosomal replication protein
1383	 47.97	0	1431036..1431404	-	122	15794430	rpsF	NMA1537	-	30S ribosomal protein S6
1384	 54.68	0	1431560..1432510	-	316	15794431	trxB	NMA1538	-	thioredoxin reductase
1385	 55.74	0	1432649..1434826	+	725	15794432	-	NMA1539	-	cation-transporting ATPase
1386	 54.64	0	1434881..1436767	+	628	15794433	uvrC	NMA1540	-	excinuclease ABC subunit C
1387	 54.88	0	1437010..1438443	+	477	15794434	-	NMA1541	-	hypothetical protein
1388	 56.49	0	1438565..1439281	+	238	15794435	trmB	NMA1542	-	tRNA (guanine-N(7))-methyltransferase
1389	 45.77	0	1439484..1440086	+	200	15794436	-	NMA1543	-	IS1016 transposase
1390	 37.39	-2	1440251..1441015	-	254	15794437	-	NMA1544	-	hypothetical protein
1391	 54.34	0	1441083..1443110	-	675	15794438	uvrB	NMA1545	-	excinuclease ABC subunit B
1392	 52.66	0	1443439..1444923	-	494	15794439	-	NMA1546	-	carboxy-terminal processing protease
1393	 51.88	0	1445043..1446848	-	601	15794440	-	NMA1547	-	hypothetical protein
1394	 46.79	0	1446921..1447076	-	51	15794441	-	NMA1548	-	hypothetical protein
1395	 52.41	0	1447176..1447736	+	186	15794442	-	NMA1549	-	lipoprotein
1396	 53.73	0	1447738..1448286	+	182	15794443	-	NMA1550	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.