IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1206	 52.81	0	1234533..1234835	-	100	15794253	-	NMA1326	-	hypothetical protein
1207	 44.79	0	1234807..1235094	-	95	15794254	-	NMA1327	-	hypothetical protein
1208	 59.57	+1	1235174..1235779	+	201	15794255	-	NMA1328	-	hypothetical protein
1209	 58.92	+1	1235758..1236054	+	98	15794256	-	NMA1329	-	hypothetical protein
1210	 55.24	0	1236051..1236260	+	69	15794257	-	NMA1330	-	hypothetical protein
1211	 54.01	0	1237954..1238601	-	215	15794258	-	NMA1332	-	periplasmic protein
1212	 52.69	0	1238598..1238969	-	123	15794259	-	NMA1334	-	periplasmic protein
1213	 53.12	0	1238976..1239647	-	223	15794260	-	NMA1335	-	periplasmic protein
1214	 58.24	0	1239812..1240582	-	256	15794261	-	NMA1336	-	short chain dehydrogenase
1215	 64.08	+1	1240615..1241928	-	437	15794262	-	NMA1338	-	oxidoreductase
1216	 54.30	0	1242009..1242881	-	290	15794263	-	NMA1339	-	poly-isoprenyl transferase
1217	 59.15	+1	1243052..1244914	+	620	15794264	hscA	NMA1340	-	chaperone protein HscA
1218	 49.47	0	1245237..1245800	+	187	15794265	-	NMA1341	-	hypothetical protein
1219	 51.69	0	1246037..1246597	+	186	15794266	-	NMA1343	-	hypothetical protein
1220	 54.09	0	1246652..1246993	+	113	15794267	fdx	NMA1344	-	ferredoxin
1221	 55.78	0	1247280..1247867	-	195	15794268	-	NMA1345	-	hypothetical protein
1222	 58.08	0	1248080..1248277	+	65	15794269	-	NMA1347	-	hypothetical protein
1223	 52.74	0	1248345..1248746	-	133	15794270	-	NMA1348	-	hypothetical protein
1224	 52.92	0	1248958..1249917	+	319	15794271	accA	NMA1349	-	acetyl-CoA carboxylase carboxyltransferase subunit alpha
1225	 52.77	0	1250015..1251295	+	426	15794272	-	NMA1350	-	hypothetical protein
1226	 55.73	0	1251369..1252154	+	261	15794273	-	NMA1351	-	RNA methyltransferase
1227	 44.73	0	1252205..1252441	+	78	15794274	-	NMA1353	-	lipoprotein
1228	 38.16	-1	1252563..1252976	+	137	15794275	-	NMA1354	-	hypothetical protein
1229	 50.00	0	1252988..1253293	+	101	15794276	-	NMA1355	-	periplasmic protein
1230	 58.32	0	1253355..1254731	+	458	15794277	mpl	NMA1356	-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase
1231	 57.26	0	1254804..1254920	+	38	15794278	-	NMA1357	-	hypothetical protein
1232	 56.41	0	1254938..1255990	+	350	15794279	bioB	NMA1358	-	biotin synthase
1233	 52.99	0	1256068..1256703	-	211	15794280	-	NMA1359	-	hypothetical protein
1234	 53.33	0	1256827..1257066	-	79	15794281	-	NMA1360	-	hypothetical protein
1235	 57.85	0	1257349..1259208	-	619	15794282	ilvD	NMA1361	-	dihydroxy-acid dehydratase
1236	 56.21	0	1259381..1261150	-	589	15794283	cysI	NMA1362	-	sulfite reductase subunit beta
1237	 58.07	0	1261177..1262991	-	604	15794284	cysJ	NMA1363	-	sulphite reductase alpha subunit
1238	 56.18	0	1262988..1264274	-	428	15794285	cysN	NMA1364	-	sulphate adenylate transferase subunit 1
1239	 58.77	0	1264313..1265236	-	307	15794286	cysD	NMA1365	-	sulfate adenylyltransferase subunit 2
1240	 53.74	0	1265274..1266008	-	244	15794287	cysH	NMA1366	-	phosphoadenosine phosphosulfate reductase
1241	 60.92	+1	1266024..1267484	-	486	15794288	cysG	NMA1367	-	sirohaem synthase
1242	 56.01	0	1267781..1268437	-	218	15794289	-	NMA1368	-	membrane protein
1243	 59.37	+1	1268502..1269392	+	296	15794290	-	NMA1369	-	hypothetical protein
1244	 56.35	0	1269662..1271473	+	603	15794291	typA	NMA1370	-	GTP-binding protein
1245	 53.54	0	1272463..1274838	+	791	15794292	vacB	NMA1371	-	ribonuclease
1246	 57.31	0	1275177..1276640	-	487	15794293	guaB	NMA1372	-	inositol-5-monophosphate dehydrogenase
1247	 28.35	-2	1276967..1277428	-	153	15794294	-	NMA1373	-	hypothetical protein
1248	 57.17	0	1277519..1280077	-	852	15794295	glnD	NMA1374	-	[protein-PII] uridylyltransferase
1249	 54.83	0	1280126..1280446	-	106	15794296	-	NMA1375	-	transcriptional regulator
1250	 49.16	0	1280770..1281243	-	157	15794297	bfrB	NMA1376	-	bacterioferritin B
1251	 53.33	0	1281271..1281735	-	154	15794298	bfrA	NMA1377	-	bacterioferritin A
1252	 54.67	0	1282199..1283182	-	327	15794299	lipA	NMA1378	-	lipoyl synthase
1253	 54.97	0	1283175..1283747	-	190	15794300	lipB	NMA1379	-	lipoate-protein ligase B
1254	 53.62	0	1283800..1284075	-	91	15794301	-	NMA1380	-	hypothetical protein
1255	 53.31	0	1284260..1285330	+	356	15794302	-	NMA1381	-	integral membrane protein
1256	 52.43	0	1285437..1286384	-	315	15794303	-	NMA1382	-	periplasmic protein
1257	 53.92	0	1286399..1286806	-	135	15794304	-	NMA1383	-	membrane protein
1258	 53.64	0	1286887..1287546	+	219	15794305	ung	NMA1384	-	uracil-DNA glycosylase
1259	 48.26	0	1290696..1291211	-	171	15794306	-	NMA1391	-	periplasmic protein
1260	 51.01	0	1293624..1294019	-	131	15794307	-	NMA1394	-	hypothetical protein
1261	 55.28	0	1294192..1295499	+	435	15794308	hom	NMA1395	-	homoserine dehydrogenase
1262	 50.80	0	1295492..1295926	+	144	15794309	-	NMA1396	-	membrane protein
1263	 52.96	0	1295985..1296254	-	89	15794310	hupB	NMA1397	-	DNA-binding protein
1264	 53.35	0	1296436..1298898	-	820	15794311	lon	NMA1398	-	ATP-dependent protease
1265	 56.02	0	1299257..1300252	+	331	15794312	-	NMA1400	-	hypothetical protein
1266	 57.16	0	1300324..1302069	-	581	15794313	recD	NMA1401	-	exodeoxyribonuclease V alpha subunit
1267	 57.33	0	1302137..1302832	-	231	15794314	-	NMA1402	-	ABC-transporter ATP-binding protein
1268	 54.89	0	1302825..1304072	-	415	15794315	-	NMA1403	-	integral membrane protein
1269	 57.94	0	1304144..1304269	+	41	15794316	-	NMA1404	-	hypothetical protein
1270	 56.27	0	1304278..1304556	+	92	15794317	-	NMA1405	-	periplasmic protein
1271	 54.53	0	1304612..1305229	-	205	15794318	recR	NMA1406	-	recombination protein
1272	 52.57	0	1305296..1306834	-	512	15794319	-	NMA1407	-	peptidyl-prolyl cis-trans isomerase
1273	 53.07	0	1306888..1307262	-	124	15794320	-	NMA1408	-	hypothetical protein
1274	 52.42	0	1307412..1309040	+	542	15794321	-	NMA1409	-	ABC-transporter ATP-binding protein
1275	 57.58	0	1309112..1310365	+	417	15794322	cca	NMA1410	-	multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase
1276	 53.40	0	1310588..1310896	+	102	15794323	-	NMA1411	-	hypothetical protein
1277	 59.79	+1	1310978..1312009	+	343	15794324	ruvB	NMA1412	-	Holliday junction DNA helicase B
1278	 52.67	0	1312032..1312760	-	242	15794325	rpe	NMA1413	-	ribulose-phosphate 3-epimerase
1279	 53.10	0	1313071..1313505	+	144	15794326	-	NMA1414	-	periplasmic protein
1280	 53.94	0	1313518..1314381	-	287	15794327	-	NMA1415	-	hypothetical protein
1281	 53.24	0	1314389..1315006	-	205	161353793	ribC	NMA1416	-	riboflavin synthase subunit alpha
1282	 52.68	0	1315169..1315747	-	192	15794329	-	NMA1417	-	molybdopterin-guanine dinucleotide biosynthesis protein A
1283	 50.71	0	1315989..1317761	+	590	15794330	-	NMA1418	-	two-component system sensor kinase
1284	 54.79	0	1317758..1318414	+	218	15794331	-	NMA1419	-	two-component system response regulator
1285	 35.66	-2	1318573..1318701	-	42	15794332	-	NMA1420	-	hypothetical protein
1286	 51.01	0	1318885..1319919	-	344	15794333	purM	NMA1421	-	phosphoribosylaminoimidazole synthetase
1287	 48.68	0	1320160..1320348	+	62	15794334	-	NMA1423	-	hypothetical protein
1288	 54.22	0	1320677..1321351	+	224	15794335	-	NMA1424	-	hypothetical protein
1289	 55.39	0	1321344..1321937	+	197	15794336	ribA	NMA1425	-	GTP cyclohydrolase II
1290	 50.00	0	1321945..1322064	+	39	15794337	-	NMA1426	-	hypothetical protein
1291	 58.24	0	1323578..1324669	+	363	15794338	ribB	NMA1429	-	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein
1292	 56.98	0	1326807..1328117	-	436	15794339	-	NMA1433	-	recombination factor protein RarA
1293	 34.57	-2	1328366..1328851	+	161	15794340	-	NMA1435	-	hypothetical protein
1294	 43.72	-1	1328851..1329630	+	259	15794341	-	NMA1436	-	hypothetical protein
1295	 54.97	0	1329902..1330816	-	304	15794342	-	NMA1437	-	LysR family transcriptional regulator
1296	 52.18	0	1331072..1332541	+	489	15794343	-	NMA1438	-	integral membrane protein
1297	 56.99	0	1332793..1333164	+	123	15794344	-	NMA1439	-	lipoprotein
1298	 53.97	0	1333237..1334646	+	469	15794345	thrC	NMA1440	-	threonine synthase
1299	 56.35	0	1334693..1335487	+	264	15794346	-	NMA1441	-	hypothetical protein
1300	 51.48	0	1335675..1336451	+	258	15794347	fpr	NMA1442	-	ferredoxin--NADP reductase
1301	 30.25	-2	1336758..1336919	+	53	15794348	-	NMA1443	-	hypothetical protein
1302	 58.78	0	1337108..1339579	-	823	15794349	-	NMA1444	-	P-type cation-transporting ATPase
1303	 57.75	0	1339576..1340685	-	369	15794350	-	NMA1445	-	hypothetical protein
1304	 56.83	0	1340759..1342039	-	426	15794351	-	NMA1446	-	periplasmic protein
1305	 52.20	0	1342192..1342917	-	241	15794352	-	NMA1447	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.