IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1023	 58.07	0	1072761..1073888	-	375	15794070	-	NMA1123	-	lipoprotein
1024	 60.39	+1	1073966..1074841	-	291	15794071	dapA	NMA1124	-	dihydrodipicolinate synthase
1025	 56.61	0	1075149..1076540	+	463	15794072	-	NMA1126	-	transmembrane transport protein
1026	 57.25	0	1076602..1077387	-	261	15794073	-	NMA1127	-	RNA methylase
1027	 58.90	+1	1077421..1077909	-	162	15794074	-	NMA1128	-	membrane protein
1028	 55.03	0	1077914..1078360	-	148	15794075	-	NMA1129	-	cytosine deaminase
1029	 57.75	0	1078637..1079578	-	313	15794076	miaA	NMA1130	-	tRNA delta(2)-isopentenylpyrophosphate transferase
1030	 45.63	0	1080050..1080358	+	102	15794077	-	NMA1131a	-	membrane protein
1031	 54.31	0	1080377..1081525	+	382	15794078	-	NMA1132	-	hypothetical protein
1032	 50.80	0	1081568..1082128	+	186	15794079	efp	NMA1133	-	elongation factor P
1033	 53.07	0	1082178..1083023	-	281	15794080	-	NMA1134	-	lipoprotein
1034	 53.78	0	1083140..1083721	-	193	15794081	-	NMA1135	-	hypothetical protein
1035	 52.72	0	1083718..1084857	-	379	15794082	metX	NMA1136	-	homoserine O-acetyltransferase
1036	 52.38	0	1085479..1085604	-	41	15794083	rpmJ	NMA1137	-	50S ribosomal protein L36
1037	 46.01	0	1085604..1085879	-	91	15794084	rpmE2	NMA1138	-	50S ribosomal protein L31 type B
1038	 52.79	0	1086078..1086956	+	292	15794085	metF	NMA1139	-	5,10-methylenetetrahydrofolate reductase
1039	 52.26	0	1087095..1089371	+	758	15794086	metE	NMA1140	-	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
1040	 48.24	0	1089650..1090387	+	245	15794087	-	NMA1141	-	redoxin
1041	 54.20	0	1090636..1092039	+	467	15794088	lpdA2	NMA1142	-	dihydrolipoamide dehydrogenase
1042	 48.68	0	1092318..1092695	+	125	15794089	sdhC	NMA1143	-	succinate dehydrogenase cytochrome B subunit
1043	 46.20	0	1092689..1093030	+	113	15794090	sdhD	NMA1144	-	succinate dehydrogenase hydrophobic membrane anchor protein
1044	 52.55	0	1093033..1094796	+	587	15794091	sdhA	NMA1145	-	succinate dehydrogenase flavoprotein subunit
1045	 47.88	0	1094916..1095623	+	235	15794092	sdhB	NMA1146	-	succinate dehydrogenase iron-sulfur subunit
1046	 42.57	-1	1095627..1095875	+	82	15794093	-	NMA1147	-	hypothetical protein
1047	 52.80	0	1095987..1097270	+	427	15794094	gltA	NMA1148	-	type II citrate synthase
1048	 51.25	0	1097475..1100303	+	942	15794095	kgd	NMA1149	-	alpha-ketoglutarate decarboxylase
1049	 52.81	0	1100403..1101614	+	403	15794096	sucB	NMA1150	-	dihydrolipoamide acetyltransferase
1050	 53.00	0	1101979..1103412	+	477	15794097	lpdA3	NMA1151	-	dihydrolipoamide dehydrogenase
1051	 46.18	0	1103507..1103794	+	95	15794098	-	NMA1152	-	membrane protein
1052	 51.33	0	1103893..1105059	+	388	15794099	sucC	NMA1153	-	succinyl-CoA synthetase subunit beta
1053	 51.96	0	1105070..1105960	+	296	15794100	sucD	NMA1154	-	succinyl-CoA synthetase subunit alpha
1054	 49.31	0	1106195..1106557	-	120	15794101	-	NMA1155a	-	hypothetical protein
1055	 47.62	0	1106803..1107033	+	76	15794102	-	NMA1156	-	hypothetical protein
1056	 33.83	-2	1107199..1107996	-	265	15794103	-	NMA1157	-	hypothetical protein
1057	 30.69	-2	1108720..1108908	-	62	15794104	-	NMA1158	-	hypothetical protein
1058	 57.15	0	1108965..1111811	-	948	15794105	uvrA	NMA1159	-	excinuclease ABC subunit A
1059	 53.01	0	1111966..1112763	+	265	15794106	-	NMA1160	-	phosphatidylserine decarboxylase
1060	 55.64	0	1114191..1116485	-	764	15794107	-	NMA1161	-	outer-membrane receptor protein
1061	 55.27	0	1116573..1116809	+	78	15794108	-	NMA1162	-	hypothetical protein
1062	 51.44	0	1116892..1117482	+	196	15794109	trpG	NMA1163	-	anthranilate synthase component II
1063	 52.69	0	1117547..1118605	+	352	15794110	trpD	NMA1164	-	anthranilate phosphoribosyltransferase
1064	 39.05	-1	1118598..1118702	+	34	15794111	-	NMA1165	-	hypothetical protein
1065	 45.99	0	1119382..1120416	+	344	15794112	-	NMA1167	-	hypothetical protein
1066	 47.54	0	1120407..1120751	+	114	15794113	-	NMA1168	-	hypothetical protein
1067	 42.42	-1	1120756..1120953	+	65	15794114	-	NMA1169	-	hypothetical protein
1068	 47.37	0	1120961..1121245	+	94	15794115	-	NMA1170	-	integral membrane protein
1069	 45.88	0	1121252..1121530	+	92	15794116	-	NMA1171	-	hypothetical protein
1070	 31.76	-2	1121658..1121975	+	105	15794117	-	NMA1172	-	hypothetical protein
1071	 42.86	-1	1121917..1122357	+	146	15794118	-	NMA1173	-	cell-surface protein
1072	 47.44	0	1122961..1123428	+	155	15794119	-	NMA1174	-	hypothetical protein
1073	 54.11	0	1123636..1125021	-	461	15794120	pntB	NMA1175	-	pyridine nucleotide transhydrogenase
1074	 56.77	0	1125087..1125470	-	127	15794121	-	NMA1176	-	membrane protein
1075	 58.50	0	1125474..1127015	-	513	15794122	pntA	NMA1177	-	NAD(P) transhydrogenase subunit alpha
1076	 47.86	0	1127143..1127259	-	38	15794123	-	NMA1178	-	hypothetical protein
1077	 54.80	0	1127305..1128138	+	277	15794124	serB	NMA1179	-	phosphoserine phosphatase
1078	 60.81	+1	1128204..1128749	+	181	15794125	-	NMA1180	-	integral membrane protein
1079	 56.88	0	1128774..1129427	+	217	15794126	-	NMA1181	-	integral membrane protein
1080	 57.25	0	1129591..1131183	+	530	15794127	purH	NMA1182	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
1081	 58.22	0	1131327..1131551	+	74	15794128	-	NMA1183	-	hypothetical protein
1082	 53.71	0	1131796..1132752	+	318	15794129	-	NMA1185	-	transposase
1083	 47.88	0	1132848..1133342	+	164	15794130	-	NMA1186	-	hypothetical protein
1084	 48.72	0	1133323..1133751	+	142	15794131	-	NMA1187	-	hypothetical protein
1085	 56.04	0	1134059..1134604	+	181	15794132	-	NMA1188	-	amidase
1086	 51.52	0	1134810..1134974	+	54	15794133	-	NMA1189	-	hypothetical protein
1087	 54.43	0	1134977..1135213	+	78	15794134	-	NMA1190	-	hypothetical protein
1088	 53.10	0	1135185..1135604	+	139	15794135	-	NMA1191	-	hypothetical protein
1089	 62.30	+1	1135624..1135806	+	60	15794136	-	NMA1192	-	hypothetical protein
1090	 46.78	0	1135851..1136021	-	56	15794137	-	NMA1193	-	hypothetical protein
1091	 42.01	-1	1136034..1136252	+	72	15794138	-	NMA1194	-	hypothetical protein
1092	 48.97	0	1136249..1136587	+	112	15794139	-	NMA1195	-	hypothetical protein
1093	 49.06	0	1136599..1136865	+	88	15794140	-	NMA1196	-	hypothetical protein
1094	 51.01	0	1136862..1137059	+	65	15794141	-	NMA1197	-	hypothetical protein
1095	 54.64	0	1137062..1137568	+	168	15794142	-	NMA1198	-	DNA-binding protein
1096	 53.47	0	1137892..1138899	-	335	15794143	-	NMA1199	-	IS1106A3 transposase
1097	 49.02	0	1139032..1140810	-	592	15794144	-	NMA1200	-	surface fibril protein
1098	 54.97	0	1142680..1142850	-	56	15794145	-	NMA1201	-	rubredoxin
1099	 58.52	0	1143308..1144399	-	363	15794146	-	NMA1202	-	acyl-CoA dehydrogenase
1100	 55.92	0	1144534..1145082	-	182	15794147	-	NMA1203	-	hypothetical protein
1101	 58.87	+1	1145237..1145608	-	123	15794148	-	NMA1204	-	hypothetical protein
1102	 55.20	0	1145903..1147594	-	563	15794149	dld	NMA1205	-	D-lactate dehydrogenase
1103	 55.63	0	1148119..1151952	+	1277	15794150	-	NMA1206	-	oxidoreductase
1104	 54.79	0	1152029..1153030	+	333	15794151	-	NMA1207	-	hypothetical protein
1105	 50.27	0	1153080..1153262	-	60	15794152	-	NMA1208	-	hypothetical protein
1106	 44.09	-1	1153921..1154013	-	30	15794153	-	NMA1209	-	hypothetical protein
1107	 55.02	0	1153976..1154284	-	102	15794154	-	NMA1210	-	hypothetical protein
1108	 56.78	0	1154336..1154851	-	171	15794155	-	NMA1211	-	hypothetical protein
1109	 43.59	-1	1155868..1155984	+	38	15794156	-	NMA1214	-	hypothetical protein
1110	 55.75	0	1155997..1156170	+	57	15794157	-	NMA1215	-	hypothetical protein
1111	 51.85	0	1156173..1156388	+	71	15794158	-	NMA1216	-	hypothetical protein
1112	 53.11	0	1156480..1157364	+	294	15794159	-	NMA1217	-	IS1106A3 transposase
1113	 56.37	0	1157629..1157832	-	67	15794160	-	NMA1218	-	hypothetical protein
1114	 53.52	0	1157844..1158170	-	108	15794161	-	NMA1219	-	hypothetical protein
1115	 49.62	0	1158163..1158426	-	87	15794162	-	NMA1220	-	hypothetical protein
1116	 62.15	+1	1158446..1159021	-	191	15794163	-	NMA1221	-	phage integrase
1117	 53.42	0	1159330..1160205	-	291	15794164	-	NMA1222	-	hypothetical protein
1118	 50.52	0	1160250..1160540	-	96	15794165	-	NMA1223	-	hypothetical protein
1119	 52.78	0	1160552..1160623	-	23	15794166	-	NMA1224	-	hypothetical protein
1120	 41.27	-1	1160845..1161222	+	125	15794167	-	NMA1225	-	phage repressor
1121	 41.46	-1	1161251..1161496	+	81	15794168	-	NMA1226	-	hypothetical protein
1122	 44.09	-1	1161582..1161674	+	30	15794169	-	NMA1227	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.