IslandPath Analysis: Nanoarchaeum equitans Kin4-M



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 31.10   STD DEV: 2.97
Nanoarchaeum equitans Kin4-M, complete genome - 1..490885
536 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
256	 29.22	0	231618..232079	+	153	41615053	-	NEQ261	-	hypothetical protein
257	 30.00	0	232046..232435	-	129	41615054	-	NEQ260	-	hypothetical protein
258	 28.65	0	232468..232659	+	63	41615055	-	NEQ262	-	hypothetical protein
259	 34.28	+1	232649..232966	+	105	41615056	-	NEQ264	-	hypothetical protein
260	 33.41	0	232923..234173	-	416	41615057	-	NEQ263	-	hypothetical protein
261	 30.41	0	234473..241066	-	2197	41615058	-	NEQ265	-	hypothetical protein
262	 28.57	0	241105..241692	-	195	41615059	-	NEQ266	-	hypothetical protein
263	 31.12	0	241689..242729	-	346	41615060	-	NEQ267	-	hypothetical protein
264	 31.97	0	242726..243607	-	293	41615061	-	NEQ268	-	hypothetical protein
265	 33.33	0	243650..244840	-	396	41615062	-	NEQ270	-	translation initiation factor IF-2 subunit gamma
266	 26.45	-1	244855..245958	-	367	41615063	-	NEQ271	-	hypothetical protein
267	 32.97	0	246109..246651	+	180	41615064	-	NEQ273	-	hypothetical protein
268	 26.76	-1	246651..247775	+	374	41615065	-	NEQ275	-	hypothetical protein
269	 30.26	0	247769..248158	-	129	41615066	rps8p	NEQ274	-	30S ribosomal protein S8P
270	 33.44	0	248284..249231	+	315	41615067	-	NEQ276	-	hypothetical protein
271	 32.80	0	249393..249770	-	125	41615068	-	NEQ277	-	hypothetical protein
272	 29.73	0	249775..250635	-	286	41615069	-	NEQ278	-	hypothetical protein
273	 27.47	-1	250706..251200	+	164	41615070	-	NEQ279	-	hypothetical protein
274	 29.97	0	251228..252655	+	475	41615071	-	NEQ281	-	hypothetical protein
275	 28.61	0	252634..253332	-	232	41615072	-	NEQ280	-	hypothetical protein
276	 34.35	+1	253475..255448	-	657	41615073	-	NEQ282	-	hypothetical protein
277	 28.87	0	255499..256305	+	268	41615074	-	NEQ283	-	hypothetical protein
278	 24.95	-2	256280..256792	+	170	41615075	-	NEQ284	-	hypothetical protein
279	 28.23	0	256970..258790	-	606	41615076	-	NEQ285	-	hypothetical protein
280	 35.74	+1	260106..260354	+	82	41615077	-	NEQ288	-	hypothetical protein
281	 27.18	-1	260680..260988	+	102	41615078	-	NEQ290	-	hypothetical protein
282	 26.94	-1	260968..261327	-	119	41615079	-	NEQ289	-	hypothetical protein
283	 28.83	0	261339..265511	-	1390	41615080	-	NEQ291	-	hypothetical protein
284	 29.09	0	265508..265672	-	54	41615081	-	NEQ292	-	hypothetical protein
285	 27.38	-1	265757..266881	-	374	41615082	-	NEQ293	-	hypothetical protein
286	 30.15	0	267116..268246	-	376	41615083	-	NEQ294	-	hypothetical protein
287	 30.58	0	268243..269115	-	290	41615084	-	NEQ295	-	hypothetical protein
288	 35.71	+1	269150..269401	+	83	41615085	-	NEQ297	-	hypothetical protein
289	 25.05	-2	269367..269825	-	152	41615086	-	NEQ296	-	hypothetical protein
290	 29.42	0	269818..270507	-	229	41615087	-	NEQ298	-	hypothetical protein
291	 32.00	0	270507..272231	-	574	41615088	-	NEQ299	-	putative ATPase RIL
292	 35.03	+1	272316..275141	+	941	41615089	-	NEQ300	-	hypothetical protein
293	 32.35	0	275146..275553	-	135	41615090	-	NEQ301	-	hypothetical protein
294	 31.20	0	275497..277185	+	562	41615091	gltX	NEQ302	-	glutamyl-tRNA synthetase
295	 38.37	+2	277214..277471	+	85	41615092	-	NEQ303	-	50S ribosomal protein L35Ae
296	 30.30	0	277468..277665	+	65	41615093	-	NEQ304	-	hypothetical protein
297	 30.86	0	277847..278290	+	147	41615094	-	NEQ305	-	hypothetical protein
298	 34.53	+1	278262..278930	+	222	41615095	-	NEQ306	-	hypothetical protein
299	 34.09	+1	279045..279572	-	175	41615096	-	NEQ307	-	hypothetical protein
300	 31.64	0	279649..280062	+	137	41615097	-	NEQ309	-	hypothetical protein
301	 30.86	0	280044..281498	-	484	41615098	-	NEQ308	-	seryl-tRNA synthetase
302	 29.60	0	281526..281954	+	142	41615099	-	NEQ310	-	hypothetical protein
303	 29.63	0	281951..282436	+	161	41615100	-	NEQ312	-	hypothetical protein
304	 32.48	0	282422..282889	-	155	41615101	rpl30p	NEQ311	-	50S ribosomal protein L30P
305	 32.93	0	283002..283250	+	82	41615102	-	NEQ314	-	hypothetical protein
306	 27.86	-1	283245..283646	-	133	41615103	-	NEQ313	-	hypothetical protein
307	 30.82	0	283658..284254	+	198	41615104	-	NEQ316	-	hypothetical protein
308	 28.02	-1	284247..285017	-	256	41615105	-	NEQ315	-	hypothetical protein
309	 31.41	0	285014..285430	-	138	41615106	-	NEQ317	-	hypothetical protein
310	 31.81	0	285479..287584	+	701	41615107	-	NEQ318	-	hypothetical protein
311	 38.62	+2	287613..287990	+	125	41615108	rpl7ae	NEQ319	-	50S ribosomal protein L7Ae
312	 29.93	0	287987..288427	+	146	41615109	-	NEQ321	-	hypothetical protein
313	 29.22	0	288404..288622	-	72	41615110	-	NEQ320	-	hypothetical protein
314	 32.89	0	288671..288898	+	75	41615111	-	NEQ322	-	hypothetical protein
315	 31.21	0	288899..289417	+	172	41615112	-	NEQ324	-	hypothetical protein
316	 30.95	0	289368..289787	-	139	41615113	-	NEQ323	-	translation initiation factor IF-2 subunit beta
317	 28.41	0	289796..290425	-	209	41615114	-	NEQ325	-	hypothetical protein
318	 32.16	0	290465..290806	+	113	41615115	rps17p	NEQ326	-	30S ribosomal protein S17P
319	 34.18	+1	290803..291039	+	78	41615116	-	NEQ328	-	hypothetical protein
320	 26.25	-1	291022..291501	-	159	41615117	-	NEQ327	-	hypothetical protein
321	 30.12	0	291473..291970	-	165	41615118	-	NEQ329	-	hypothetical protein
322	 31.32	0	291967..292908	-	313	41615119	-	NEQ330	-	hypothetical protein
323	 31.48	0	293211..293480	+	89	41615120	-	NEQ331	-	hypothetical protein
324	 29.06	0	293477..294319	+	280	41615121	-	NEQ332	-	hypothetical protein
325	 29.09	0	294337..294855	+	172	41615122	-	NEQ334	-	hypothetical protein
326	 27.78	-1	294842..295471	-	209	41615123	-	NEQ333	-	hypothetical protein
327	 30.22	0	295458..296003	-	181	41615124	-	NEQ335	-	hypothetical protein
328	 28.36	0	295994..296818	-	274	41615125	-	NEQ336	-	hypothetical protein
329	 33.33	0	296866..297063	+	65	41615126	-	NEQ338	-	DNA-directed RNA polymerase subunit N
330	 30.76	0	297050..297631	-	193	41615127	-	NEQ337	-	hypothetical protein
331	 28.07	-1	297849..298418	+	189	41615128	-	NEQ340	-	hypothetical protein
332	 28.48	0	298392..298865	-	157	41615129	-	NEQ339	-	hypothetical protein
333	 33.96	0	298862..299977	-	371	41615130	-	NEQ341	-	DNA primase
334	 32.16	0	299999..301024	-	341	41615131	-	NEQ342	-	hypothetical protein
335	 34.06	0	301096..301506	+	136	41615132	-	NEQ344	-	hypothetical protein
336	 28.71	0	301496..302014	-	172	41615133	-	NEQ343	-	hypothetical protein
337	 36.37	+1	302044..303954	-	636	41615134	-	NEQ345	-	anaerobic ribonucleoside triphosphate reductase
338	 31.67	0	304107..305006	-	299	41615135	-	NEQ345a	-	hypothetical protein
339	 30.38	0	304993..305229	-	78	41615136	-	NEQ346	-	hypothetical protein
340	 34.33	+1	305259..306059	-	266	41615137	-	NEQ347	-	hypothetical protein
341	 39.91	+2	306082..306309	-	75	41615138	-	NEQ348	-	hypothetical protein
342	 35.94	+1	306335..308137	-	600	41615139	-	NEQ349	-	ATP-dependent protease Lon
343	 31.09	0	308163..308474	-	103	41615140	-	NEQ350	-	hypothetical protein
344	 30.48	0	308722..308931	+	69	41615141	-	NEQ351	-	hypothetical protein
345	 27.62	-1	309033..309662	+	209	41615142	-	NEQ352	-	hypothetical protein
346	 32.77	0	309789..311573	+	594	41615143	-	NEQ353	-	hypothetical protein
347	 22.76	-2	311574..311819	-	81	41615144	-	NEQ354	-	hypothetical protein
348	 28.57	0	311847..312266	+	139	41615145	-	NEQ356	-	hypothetical protein
349	 29.39	0	312259..312537	-	92	41615146	-	NEQ355	-	hypothetical protein
350	 29.58	0	312526..313245	+	239	41615147	-	NEQ358	-	hypothetical protein
351	 30.34	0	313232..313666	-	144	41615148	-	NEQ357	-	hypothetical protein
352	 39.33	+2	313666..313932	-	88	41615149	rps28e	NEQ359	-	30S ribosomal protein S28e
353	 39.47	+2	313982..314698	+	238	41615150	rpl2p	NEQ361	-	50S ribosomal protein L2P
354	 32.64	0	314673..315971	-	432	41615151	-	NEQ360	-	hypothetical protein
355	 29.44	0	316076..316846	+	256	41615152	-	NEQ362	-	hypothetical protein
31.10	MEAN

2.97	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.