IslandPath Analysis: Nanoarchaeum equitans Kin4-M



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 31.10   STD DEV: 2.97
Nanoarchaeum equitans Kin4-M, complete genome - 1..490885
536 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
183	 31.41	0	167163..168512	+	449	41614980	gatB	NEQ185	-	aspartyl/glutamyl-tRNA amidotransferase subunit B
184	 33.51	0	168505..169614	+	369	41614981	-	NEQ186	-	proteasome-activating nucleotidase
185	 27.73	-1	169614..169934	+	106	41614982	-	NEQ188	-	hypothetical protein
186	 35.00	+1	169924..170403	-	159	161511236	-	NEQ187	-	30S ribosomal protein S19e
187	 31.88	0	170432..171328	+	298	41614984	-	NEQ190	-	hypothetical protein
188	 27.98	-1	171319..172383	-	354	41614985	-	NEQ189	-	hypothetical protein
189	 37.67	+2	172477..173145	+	222	41614986	-	NEQ191	-	hypothetical protein
190	 28.47	0	173193..173603	+	136	41614987	-	NEQ193	-	hypothetical protein
191	 28.15	0	173587..175362	-	591	41614988	-	NEQ192	-	hypothetical protein
192	 27.59	-1	175392..176558	+	388	41614989	-	NEQ195	-	hypothetical protein
193	 29.69	0	176545..176901	-	118	41614990	-	NEQ194	-	hypothetical protein
194	 25.49	-1	176888..177193	+	101	41614991	-	NEQ196	-	hypothetical protein
195	 24.57	-2	177181..177591	+	136	41614992	-	NEQ197	-	hypothetical protein
196	 28.70	0	177596..178609	+	337	41614993	-	NEQ198	-	hypothetical protein
197	 30.33	0	179657..180388	-	243	41614994	-	NEQ199	-	hypothetical protein
198	 29.65	0	180381..180923	-	180	41614995	-	NEQ200	-	hypothetical protein
199	 39.48	+2	180895..181203	-	102	41614996	rpl12p	NEQ201	-	50S ribosomal protein L12P
200	 32.19	0	181267..181791	+	174	41614997	rpl22p	NEQ204	-	50S ribosomal protein L22P
201	 33.33	0	181768..182358	-	196	41614998	-	NEQ203	-	hypothetical protein
202	 31.61	0	182387..182851	-	154	41614999	-	NEQ205	-	hypothetical protein
203	 30.54	0	183094..183522	+	142	41615000	-	NEQ206	-	hypothetical protein
204	 31.04	0	183522..185135	+	537	41615001	-	NEQ208	-	hypothetical protein
205	 34.36	+1	185128..185616	-	162	41615002	-	NEQ207	-	hypothetical protein
206	 32.16	0	185634..187769	-	711	41615003	-	NEQ209	-	hypothetical protein
207	 33.02	0	187790..189403	-	537	41615004	-	NEQ210	-	prolyl-tRNA synthetase
208	 29.02	0	189419..189835	+	138	41615005	-	NEQ212	-	hypothetical protein
209	 29.40	0	189807..191306	-	499	41615006	-	NEQ211	-	hypothetical protein
210	 32.10	0	191290..191856	-	188	41615007	-	NEQ213	-	hypothetical protein
211	 27.78	-1	192128..193333	-	401	41615008	-	NEQ214	-	hypothetical protein
212	 26.52	-1	193335..194009	-	224	41615009	-	NEQ215	-	hypothetical protein
213	 24.18	-2	193996..194268	-	90	41615010	-	NEQ216	-	hypothetical protein
214	 43.33	+2	194261..194470	-	69	41615011	-	NEQ217	-	hypothetical protein
215	 31.74	0	194492..194992	-	166	41615012	-	NEQ218	-	hypothetical protein
216	 33.84	0	194992..195189	-	65	41615013	rps27e	NEQ219	-	30S ribosomal protein S27e
217	 29.27	0	195257..195502	+	81	41615014	-	NEQ220	-	hypothetical protein
218	 32.66	0	195532..195828	+	98	41615015	-	NEQ221	-	hypothetical protein
219	 35.63	+1	195858..197864	+	668	41615016	-	NEQ222	-	hypothetical protein
220	 30.30	0	197875..198699	-	274	41615017	-	NEQ223	-	hypothetical protein
221	 28.50	0	198788..199201	+	137	41615018	-	NEQ224	-	hypothetical protein
222	 28.14	0	199209..199997	+	262	41615019	-	NEQ225	-	hypothetical protein
223	 28.28	0	199994..200884	+	296	41615020	-	NEQ226	-	hypothetical protein
224	 33.33	0	200909..201118	+	69	41615021	-	NEQ227	-	hypothetical protein
225	 27.58	-1	201106..201522	+	138	41615022	-	NEQ229	-	hypothetical protein
226	 27.63	-1	201510..202403	-	297	41615023	-	NEQ228	-	hypothetical protein
227	 31.92	0	202400..205450	-	1016	41615024	-	NEQ230	-	hypothetical protein
228	 37.88	+2	205498..205695	+	65	41615025	-	NEQ231	-	hypothetical protein
229	 28.57	0	205695..206219	+	174	41615026	-	NEQ233	-	hypothetical protein
230	 26.93	-1	206206..207111	-	301	41615027	-	NEQ232	-	hypothetical protein
231	 30.34	0	207108..208010	-	300	41615028	-	NEQ234	-	hypothetical protein
232	 29.97	0	207979..208752	+	257	41615029	-	NEQ235	-	hypothetical protein
233	 33.83	0	208820..209830	+	336	41615030	-	NEQ236	-	hypothetical protein
234	 25.51	-1	209835..210422	+	195	41615031	-	NEQ237	-	hypothetical protein
235	 30.11	0	210409..210936	+	175	41615032	-	NEQ238	-	hypothetical protein
236	 32.96	0	210954..213887	+	977	41615033	leuS	NEQ239	-	leucyl-tRNA synthetase
237	 31.82	0	213933..215513	+	526	41615034	-	NEQ240	-	DNA polymerase II small subunit
238	 30.74	0	215545..216123	+	192	41615035	-	NEQ241	-	hypothetical protein
239	 34.84	+1	216154..216750	+	198	41615036	-	NEQ242	-	30S ribosomal protein S7P
240	 27.30	-1	216750..217412	+	220	41615037	-	NEQ243	-	hypothetical protein
241	 32.35	0	217416..218228	+	270	41615038	-	NEQ245	-	glutamyl-tRNA(Gln) amidotransferase subunit E
242	 34.48	+1	218214..218561	-	115	41615039	-	NEQ244	-	peptidyl-tRNA hydrolase
243	 28.11	-1	218546..219196	-	216	41615040	-	NEQ246	-	hypothetical protein
244	 35.73	+1	219180..219722	-	180	41615041	rps4p	NEQ247	-	30S ribosomal protein S4
245	 33.76	0	219770..220471	+	233	41615042	-	NEQ248	-	exosome complex exonuclease Rrp41
246	 31.84	0	220568..221104	-	178	41615043	-	NEQ249	-	hypothetical protein
247	 29.24	0	221225..221737	-	170	41615044	-	NEQ250	-	hypothetical protein
248	 31.47	0	221873..224128	+	751	41615045	valS	NEQ252	-	valyl-tRNA synthetase
249	 30.53	0	224014..225156	+	380	41615046	-	NEQ254	-	hypothetical protein
250	 26.24	-1	225113..225577	-	154	41615047	-	NEQ253	-	hypothetical protein
251	 27.53	-1	225745..228105	+	786	41615048	-	NEQ256	-	hypothetical protein
252	 27.69	-1	228095..228643	-	182	41615049	-	NEQ255	-	hypothetical protein
253	 32.62	0	228597..229019	-	140	41615050	rpl24p	NEQ257	-	50S ribosomal protein L24P
254	 32.95	0	229048..229305	-	85	41615051	-	NEQ258	-	hypothetical protein
255	 28.92	0	229561..231621	+	686	41615052	-	NEQ259	-	hypothetical protein
256	 29.22	0	231618..232079	+	153	41615053	-	NEQ261	-	hypothetical protein
257	 30.00	0	232046..232435	-	129	41615054	-	NEQ260	-	hypothetical protein
258	 28.65	0	232468..232659	+	63	41615055	-	NEQ262	-	hypothetical protein
259	 34.28	+1	232649..232966	+	105	41615056	-	NEQ264	-	hypothetical protein
260	 33.41	0	232923..234173	-	416	41615057	-	NEQ263	-	hypothetical protein
261	 30.41	0	234473..241066	-	2197	41615058	-	NEQ265	-	hypothetical protein
262	 28.57	0	241105..241692	-	195	41615059	-	NEQ266	-	hypothetical protein
263	 31.12	0	241689..242729	-	346	41615060	-	NEQ267	-	hypothetical protein
264	 31.97	0	242726..243607	-	293	41615061	-	NEQ268	-	hypothetical protein
265	 33.33	0	243650..244840	-	396	41615062	-	NEQ270	-	translation initiation factor IF-2 subunit gamma
266	 26.45	-1	244855..245958	-	367	41615063	-	NEQ271	-	hypothetical protein
267	 32.97	0	246109..246651	+	180	41615064	-	NEQ273	-	hypothetical protein
268	 26.76	-1	246651..247775	+	374	41615065	-	NEQ275	-	hypothetical protein
269	 30.26	0	247769..248158	-	129	41615066	rps8p	NEQ274	-	30S ribosomal protein S8P
270	 33.44	0	248284..249231	+	315	41615067	-	NEQ276	-	hypothetical protein
271	 32.80	0	249393..249770	-	125	41615068	-	NEQ277	-	hypothetical protein
272	 29.73	0	249775..250635	-	286	41615069	-	NEQ278	-	hypothetical protein
273	 27.47	-1	250706..251200	+	164	41615070	-	NEQ279	-	hypothetical protein
274	 29.97	0	251228..252655	+	475	41615071	-	NEQ281	-	hypothetical protein
275	 28.61	0	252634..253332	-	232	41615072	-	NEQ280	-	hypothetical protein
276	 34.35	+1	253475..255448	-	657	41615073	-	NEQ282	-	hypothetical protein
277	 28.87	0	255499..256305	+	268	41615074	-	NEQ283	-	hypothetical protein
278	 24.95	-2	256280..256792	+	170	41615075	-	NEQ284	-	hypothetical protein
279	 28.23	0	256970..258790	-	606	41615076	-	NEQ285	-	hypothetical protein
280	 35.74	+1	260106..260354	+	82	41615077	-	NEQ288	-	hypothetical protein
281	 27.18	-1	260680..260988	+	102	41615078	-	NEQ290	-	hypothetical protein
282	 26.94	-1	260968..261327	-	119	41615079	-	NEQ289	-	hypothetical protein
31.10	MEAN

2.97	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.