version 1.0
Mycoplasma synoviae 53, complete genome - 1..799476 672 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 242 32.77 0 269073..270146 - 357 71894267 - MS53_0245 - putative phase-variable hemagglutinin 243 34.52 +1 270176..270679 - 167 71894268 - MS53_0246 - putative phase-variable hemagglutinin 244 36.08 +1 270658..272115 - 485 71894269 - MS53_0247 - putative phase-variable hemagglutinin 245 33.18 0 272142..272810 - 222 71894270 - MS53_0248 - putative phase-variable hemagglutinin 246 36.00 +1 273122..275074 - 650 71894271 - MS53_0249 - putative phase-variable hemagglutinin 247 31.49 0 275101..275589 - 162 71894272 - MS53_0250 - putative phase-variable hemagglutinin 248 30.57 0 275640..276653 - 337 71894273 - MS53_0251 - putative phase-variable hemagglutinin 249 33.42 +1 276683..277813 - 376 71894274 - MS53_0252 - putative phase-variable hemagglutinin 250 35.12 +1 278137..279144 - 335 71894275 - MS53_0253 - putative phase-variable hemagglutinin 251 31.98 0 279264..280298 - 344 71894276 - MS53_0254 - putative phase-variable hemagglutinin 252 33.05 0 280328..281392 - 354 71894277 - MS53_0255 - putative phase-variable hemagglutinin 253 35.06 +1 281422..282000 - 192 71894278 - MS53_0256 - putative phase-variable hemagglutinin 254 37.56 +1 282000..283349 - 449 71894279 - MS53_0257 - putative phase-variable hemagglutinin 255 32.54 0 283404..283907 - 167 71894280 - MS53_0258 - putative phase-variable hemagglutinin 256 35.58 +1 283940..285007 - 355 71894281 - MS53_0259 - putative phase-variable hemagglutinin 257 33.91 +1 285040..285561 - 173 71894282 - MS53_0260 - putative phase-variable hemagglutinin 258 33.13 0 285637..286119 - 160 71894283 - MS53_0261 - putative phase-variable hemagglutinin 259 35.70 +1 286431..288416 - 661 71894284 - MS53_0262 - putative phase-variable hemagglutinin 260 30.98 0 288443..288994 - 183 71894285 - MS53_0263 - putative phase-variable hemagglutinin 261 29.44 0 289494..290186 - 230 71894286 - MS53_0264 - putative phase-variable hemagglutinin 262 31.51 0 290213..290596 - 127 71894287 - MS53_0265 - putative phase-variable hemagglutinin 263 34.20 +1 290577..290807 - 76 71894288 - MS53_0266 - putative phase-variable hemagglutinin 264 34.56 +1 290812..291219 - 135 71894289 - MS53_0267 - putative phase-variable hemagglutinin 265 37.08 +1 292135..293844 + 569 71894290 vlhA MS53_0268 - phase-variable hemagglutinin 266 34.31 +1 293844..294455 + 203 71894291 - MS53_0269 - putative phase-variable hemagglutinin 267 34.43 +1 294593..295597 + 334 71894292 gapA MS53_0270 - glyceraldehyde 3-phosphate dehydrogenase 268 23.21 -1 295849..297597 + 582 71894293 uvrC MS53_0271 - excinuclease ABC subunit C 269 35.38 +1 297651..298775 + 374 71894294 pdhA MS53_0272 - pyruvate dehydrogenase E1 component, alpha subunit 270 39.46 +2 298772..299767 + 331 71894295 pdhB MS53_0273 - pyruvate dehydrogenase E1 component, beta subunit 271 36.16 +1 299788..300672 + 294 71894296 pdhC MS53_0274 - dihydrolipoamide acetyltransferase 272 38.15 +2 300674..302542 + 622 71894297 pdhD MS53_0275 - dihydrolipoamide dehydrogenase 273 18.23 -2 304268..304651 + 127 71894298 - MS53_0277 - hypothetical protein 274 26.02 0 305657..306586 + 309 71894299 - MS53_0279 - putative MGPA-like protein 275 22.85 -1 309020..309763 + 247 71894300 licA MS53_0282 - PTS system, lichenan-specific IIA component 276 24.79 0 310107..311768 + 553 71894301 - MS53_0283 - putative transposase,undefined 277 26.71 0 311934..313292 - 452 71894302 - MS53_0284 - hypothetical protein 278 28.76 0 313361..315700 - 779 71894303 - MS53_0285 - hypothetical protein 279 20.41 -1 316115..316501 + 128 71894304 - MS53_0286 - hypothetical protein 280 27.41 0 316527..316982 + 151 71894305 - MS53_0287 - hypothetical protein 281 27.41 0 319033..319353 + 106 71894306 - MS53_0288 - hypothetical protein 282 15.53 -2 320837..321055 + 72 71894307 - MS53_0290 - hypothetical protein 283 22.22 -1 321056..321433 + 125 71894308 - MS53_0291 - hypothetical protein 284 27.00 0 321706..321942 + 78 71894309 - MS53_0292 - hypothetical protein 285 18.63 -2 321946..323577 + 543 71894310 - MS53_0293 - hypothetical protein 286 20.15 -1 323612..325492 + 626 71894311 - MS53_0294 - hypothetical protein 287 32.21 0 327690..328670 - 326 71894312 pfk MS53_0296 - 6-phosphofructokinase 288 33.21 0 328667..329503 - 278 71894313 folD MS53_0297 - methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase 289 27.93 0 329491..331989 - 832 71894314 valS MS53_0298 - valyl-tRNA synthetase 290 37.02 +1 332304..333197 + 297 71894315 - MS53_0299 - putative endoglucanase 291 32.62 0 333221..333640 + 139 71894316 - MS53_0300 - putative neutrophil activating protein NapA 292 27.54 0 333727..335937 + 736 71894317 vacB MS53_0301 - VACB-like ribonuclease II 293 27.67 0 335927..336703 + 258 71894318 - MS53_0302 - putative DNA methylase 294 26.01 0 336705..338261 + 518 71894319 metG MS53_0303 - methionyl-tRNA synthetase 295 24.42 0 338257..338559 + 100 71894320 - MS53_0304 - hypothetical protein 296 32.46 0 338587..339852 - 421 71894321 glyA MS53_0305 - serine hydroxymethyltransferase 297 25.79 0 339855..342014 - 719 71894322 pheT MS53_0306 - putative phenylalanyl-tRNA synthetase beta chain 298 26.81 0 342019..342693 - 224 71894323 ung MS53_0307 - uracil-DNA glycosylase 299 28.56 0 342697..343638 - 313 71894324 pheS MS53_0308 - phenylalanyl-tRNA synthetase subunit alpha 300 29.63 0 343796..344416 + 206 71894325 upp MS53_0309 - uracil phosphoribosyltransferase 301 21.87 -1 344437..345186 + 249 71894326 - MS53_0310 - hypothetical protein 302 25.54 0 345195..347492 + 765 71894327 leuS MS53_0311 - leucyl-tRNA synthetase 303 28.84 0 347532..350204 + 890 71894328 lon MS53_0312 - heat shock ATP-dependent protease 304 21.45 -1 350644..351417 + 257 71894329 - MS53_0313 - hypothetical protein 305 20.36 -1 351429..351821 + 130 71894330 - MS53_0314 - hypothetical protein 306 22.61 -1 351963..352307 + 114 71894331 - MS53_0315 - hypothetical protein 307 27.86 0 352722..354914 + 730 71894332 - MS53_0316 - hypothetical protein 308 31.76 0 354970..357567 - 865 71894333 gyrA MS53_0317 - DNA gyrase subunit A 309 28.02 0 357677..358372 - 231 71894334 rluB MS53_0318 - ribosomal large subunit pseudouridine synthase B 310 28.08 0 358384..359469 - 361 71894335 nadD MS53_0319 - putative nicotinate-nucleotide adenylyltransferase 311 24.96 0 359471..360640 - 389 71894336 dinP MS53_0320 - DNA polymerase IV 312 25.56 0 360699..361097 - 132 71894337 nifU MS53_0321 - nitrogen fixation protein NifU 313 26.74 0 361114..362280 - 388 71894338 nifS MS53_0322 - nitrogen fixation protein NifS 314 21.44 -1 362281..362751 - 156 71894339 - MS53_0323 - hypothetical protein 315 25.48 0 362753..363223 - 156 71894340 - MS53_0324 - hypothetical protein 316 27.44 0 363232..364674 - 480 71894341 - MS53_0325 - hypothetical protein 317 28.40 0 364757..365608 + 283 71894342 - MS53_0326 - hypothetical protein 318 26.53 0 367338..371939 - 1533 71894343 - MS53_0328 - hypothetical protein 319 34.56 +1 372359..374722 + 787 71894344 - MS53_0329 - hypothetical protein 320 30.85 0 374750..376840 + 696 71894345 - MS53_0330 - putative ABC transporter ATP-binding protein 321 30.08 0 376893..377876 + 327 71894346 ugpA MS53_0331 - ABC transporter, permease protein 322 33.33 +1 377866..378840 + 324 71894347 ugpE MS53_0332 - ABC transporter permease protein 323 27.98 0 379118..380668 + 516 71894348 - MS53_0333 - hypothetical protein 324 33.55 +1 380685..383000 + 771 71894349 - MS53_0334 - hypothetical protein 325 24.87 0 383078..383833 + 251 71894350 - MS53_0335 - hypothetical protein 326 29.51 0 383833..384801 + 322 71894351 - MS53_0336 - putative MgpA like-protein 327 30.62 0 384797..385753 + 318 71894352 - MS53_0337 - putative MgpA like-protein 328 27.89 0 385844..386725 + 293 71894353 - MS53_0338 - asparagine synthetase AsnA 329 28.94 0 386733..387461 + 242 71894354 - MS53_0339 - putative PTS system, lichenan-specific IIA component 330 35.05 +1 387570..389198 - 542 71894355 ftsZ MS53_0340 - cell division protein 331 22.56 -1 389347..390516 - 389 71894356 - MS53_0341 - hypothetical protein 332 28.37 0 390519..391424 - 301 71894357 yabC MS53_0342 - S-adenosyl-methyltransferase 333 32.66 0 391414..391857 - 147 71894358 - MS53_0343 - hypothetical protein 334 25.06 0 391984..392430 - 148 71894359 - MS53_0344 - hypothetical protein 335 26.73 0 392438..394828 - 796 71894360 oppF-1 MS53_0345 - oligopeptide ABC transporter ATP-binding protein 336 32.33 0 394883..395881 - 332 71894361 oppD-1 MS53_0346 - oligopeptide ABC transporter, ATP-binding protein 337 30.73 0 395878..397221 - 447 71894362 oppC-1 MS53_0347 - oligopeptide transport system permease protein 338 29.16 0 397233..398357 - 374 71894363 oppB-1 MS53_0348 - oligopeptide ABC transporter permease protein 339 29.91 0 398366..401341 - 991 71894364 - MS53_0349 - putative lipoprotein 340 27.07 0 401376..403211 - 611 71894365 pepF MS53_0350 - oligoendopeptidase F 341 34.90 +1 403390..405180 - 596 71894366 dnaK MS53_0351 - molecular chaperone DnaK 28.74 MEAN 4.56 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0