IslandPathversion 1.0

IslandPath Analysis: Mycoplasma hyopneumoniae J



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 29.24 STD DEV: 4.17
Mycoplasma hyopneumoniae J, complete genome - 1..897405
665 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
388	 23.86	-1	483185..483976	-	263	71893747	-	MHJ_0395	-	hypothetical protein
389	 21.95	-1	484167..484904	-	245	71893748	-	MHJ_0396	-	hypothetical protein
390	 27.75	0	484906..485496	-	196	71893749	-	MHJ_0397	-	hypothetical protein
391	 22.84	-1	485839..487020	-	393	71893750	-	MHJ_0398	-	hypothetical protein
392	 25.00	-1	489229..489444	+	71	71893751	-	MHJ_0400	-	hypothetical protein
393	 27.31	0	489474..489905	+	143	71893752	-	MHJ_0401	-	hypothetical protein
394	 23.85	-1	489946..490272	+	108	71893753	-	MHJ_0402	-	hypothetical protein
395	 26.09	0	490301..491680	-	459	71893754	-	MHJ_0403	-	hypothetical protein
396	 31.97	0	492459..492899	+	146	71893755	-	MHJ_0404	-	cell division protein MraZ
397	 31.65	0	492901..493791	+	296	71893756	-	MHJ_0405	-	putative S-adenosyl-methyltransferase
398	 29.92	0	493840..494805	+	321	71893757	ftsZ	MHJ_0406	-	cell division protein ftsZ
399	 34.02	+1	495034..496047	+	337	71893758	-	MHJ_0407	-	nicotinate phosphoribosyltransferase
400	 29.88	0	496055..496807	+	250	71893759	-	MHJ_0408	-	putative DNA methylase
401	 27.04	0	496800..498341	+	513	71893760	metG	MHJ_0409	-	methionyl-tRNA synthetase
402	 24.89	-1	498338..499213	-	291	71893761	-	MHJ_0410	-	hypothetical protein
403	 30.70	0	499414..500097	-	227	71893762	rnc	MHJ_0411	-	ribonuclease III
404	 26.88	0	500162..500719	-	185	71893763	-	MHJ_0412	-	hypothetical protein
405	 26.77	0	501028..502551	+	507	71893764	-	MHJ_0413	-	hypothetical protein
406	 32.37	0	503044..504393	+	449	71893765	asnC	MHJ_0414	-	asparaginyl-tRNA synthetase
407	 21.66	-1	504455..505045	+	196	71893766	-	MHJ_0415	-	hypothetical protein
408	 31.24	0	505062..507308	+	748	71893767	pcrA	MHJ_0416	-	ATP-dependent helicase PcrA
409	 24.42	-1	507310..508734	+	474	71893768	-	MHJ_0417	-	hypothetical protein
410	 31.53	0	508838..509503	+	221	71893769	ruvA	MHJ_0418	-	Holliday junction DNA helicase motor protein
411	 31.52	0	509499..510437	+	312	71893770	ruvB	MHJ_0419	-	Holliday junction DNA helicase B
412	 26.04	0	510453..512276	-	607	71893771	-	MHJ_0420	-	hypothetical protein
413	 28.20	0	512372..513520	-	382	71893772	-	MHJ_0421	-	hypothetical protein
414	 30.84	0	513777..514499	-	240	71893773	-	MHJ_0422	-	hypothetical protein
415	 30.38	0	514625..516283	-	552	71893774	-	MHJ_0423	-	putative type III restriction-modification system: methylase
416	 39.37	+2	516642..516989	-	115	71893775	-	MHJ_0424	-	hypothetical protein
417	 32.62	0	517247..517804	+	185	71893776	efp	MHJ_0425	-	elongation factor P
418	 33.66	+1	517842..519689	+	615	71893777	tkt	MHJ_0426	-	transketolase
419	 27.74	0	519847..520758	+	303	71893778	-	MHJ_0427	-	hypothetical protein
420	 32.53	0	520758..521876	+	372	71893779	trmU	MHJ_0428	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
421	 31.06	0	521916..523145	-	409	71893780	-	MHJ_0429	-	hypothetical protein
422	 31.19	0	523347..524744	-	465	71893781	-	MHJ_0430	-	hypothetical protein
423	 32.24	0	524949..526868	-	639	71893782	-	MHJ_0431	-	hypothetical protein
424	 25.40	0	526991..527494	-	167	71893783	-	MHJ_0432	-	hypothetical protein
425	 31.08	0	527496..528338	-	280	71893784	-	MHJ_0433	-	hypothetical protein
426	 37.34	+1	528376..529098	-	240	71893785	araD	MHJ_0434	-	L-ribulose-5-phosphate 4-epimerase
427	 30.85	0	529088..529972	-	294	71893786	sgaU	MHJ_0435	-	L-xylulose 5-phosphate 3-epimerase
428	 37.37	+1	529953..530621	-	222	71893787	ulaD	MHJ_0436	-	3-keto-L-gulonate-6-phosphate decarboxylase
429	 34.39	+1	530936..533023	-	695	71893788	-	MHJ_0437	-	hypothetical protein
430	 28.49	0	533223..534812	-	529	71893789	-	MHJ_0438	-	hypothetical protein
431	 26.58	0	535032..536690	+	552	71893790	-	MHJ_0439	-	putative transposase
432	 31.90	0	536765..537043	+	92	71893791	-	MHJ_0440	-	hypothetical protein
433	 32.45	0	537119..539035	-	638	71893792	-	MHJ_0441	-	hypothetical protein
434	 34.93	+1	539756..544771	-	1671	71893793	-	MHJ_0442	-	hypothetical protein
435	 30.81	0	544822..551238	-	2138	71893794	-	MHJ_0443	-	hypothetical protein
436	 33.91	+1	551339..556051	-	1570	71893795	-	MHJ_0444	-	hypothetical protein
437	 30.85	0	556075..563295	-	2406	71893796	-	MHJ_0445	-	hypothetical protein
438	 30.45	0	563611..564165	-	184	71893797	-	MHJ_0446	-	GTPase EngB
439	 33.47	+1	564349..565089	-	246	71893798	-	MHJ_0447	-	hypothetical protein
440	 35.19	+1	565392..566525	-	377	71893799	metK	MHJ_0448	-	S-adenosylmethionine synthetase
441	 35.37	+1	566618..567502	-	294	71893800	-	MHJ_0449	-	putative ABC transporter ATP-binding protein
442	 29.06	0	567623..575605	-	2660	71893801	-	MHJ_0450	-	hypothetical protein
443	 28.03	0	575771..576355	+	194	71893802	acpD	MHJ_0451	-	acyl carrier protein phosphodiesterase
444	 29.37	0	576369..576974	+	201	71893803	acpD-1	MHJ_0452	-	acyl carrier protein phosphodiesterase
445	 37.39	+1	577033..577254	+	73	71893804	rpmE	MHJ_0453	-	50S ribosomal protein L31
446	 25.75	0	577275..577709	+	144	71893805	napA	MHJ_0454	-	neutrophil activating factor
447	 32.64	0	577732..578601	+	289	71893806	rluD	MHJ_0455	-	ribosomal large subunit pseudouridine synthase D
448	 36.21	+1	578662..579357	-	231	71893807	rplA	MHJ_0456	-	50S ribosomal protein L1
449	 35.56	+1	579359..579808	-	149	71893808	rplK	MHJ_0457	-	50S ribosomal protein L11
450	 29.72	0	580400..580897	+	165	71893809	-	MHJ_0458	-	hypothetical protein
451	 30.30	0	581234..581794	+	186	71893810	-	MHJ_0459	-	hypothetical protein
452	 30.63	0	582217..584469	+	750	71893811	-	MHJ_0460	-	hypothetical protein
453	 35.02	+1	584676..586037	-	453	71893812	pepA	MHJ_0461	-	leucyl aminopeptidase
454	 26.73	0	586199..586804	-	201	71893813	trmB	MHJ_0462	-	tRNA (guanine-N(7))-methyltransferase
455	 35.81	+1	586828..587634	-	268	71893814	-	MHJ_0463	-	hypothetical protein
456	 26.75	0	587760..588701	-	313	71893815	-	MHJ_0464	-	hypothetical protein
457	 25.16	0	588706..590772	-	688	71893816	-	MHJ_0465	-	hypothetical protein
458	 26.37	0	590769..591443	-	224	71893817	-	MHJ_0466	-	putative ABC transporter atp-binding protein
459	 27.22	0	591486..593267	-	593	71893818	-	MHJ_0467	-	hypothetical protein
460	 23.04	-1	593469..594362	+	297	71893819	-	MHJ_0468	-	hypothetical protein
461	 31.89	0	594437..596173	+	578	71893820	ptsI	MHJ_0469	-	phosphoenolpyruvate-protein phosphotransferase
462	 29.42	0	596348..597088	+	246	71893821	nadE	MHJ_0470	-	NH(3)-dependent NAD+ synthetase
463	 31.41	0	597088..597816	+	242	71893822	-	MHJ_0471	-	hypothetical protein
464	 27.78	0	597846..598475	-	209	71893823	pfs	MHJ_0472	-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
465	 29.47	0	598483..599568	-	361	161611219	nadD	MHJ_0473	-	putative nicotinate-nucleotide adenylyltransferase
466	 33.01	0	599572..600492	-	306	71893825	-	MHJ_0474	-	hypothetical protein
467	 36.03	+1	601055..602428	-	457	161611218	atpD-1	MHJ_0475	-	F0F1 ATP synthase subunit beta
468	 35.02	+1	602431..603969	-	512	71893827	atpA	MHJ_0476	-	F0F1 ATP synthase subunit alpha
469	 31.24	0	603969..606119	-	716	71893828	-	MHJ_0477	-	hypothetical protein
470	 25.69	0	606196..606666	-	156	71893829	-	MHJ_0478	-	hypothetical protein
471	 27.47	0	606667..607536	-	289	71893830	-	MHJ_0479	-	hypothetical protein
472	 31.39	0	607552..608118	-	188	71893831	-	MHJ_0480	-	hypothetical protein
473	 26.25	0	608131..609711	-	526	71893832	-	MHJ_0481	-	hypothetical protein
474	 29.73	0	610004..610807	+	267	71893833	-	MHJ_0482	-	hypothetical protein
475	 28.51	0	610852..611556	-	234	71893834	-	MHJ_0483	-	hypothetical protein
476	 32.30	0	611657..613111	-	484	71893835	mgtE	MHJ_0484	-	putative MG2+ transport protein
477	 33.17	0	613127..613738	-	203	71893836	-	MHJ_0485	-	hypothetical protein
478	 32.61	0	613971..616610	-	879	71893837	-	MHJ_0486	-	hypothetical protein
479	 34.16	+1	617070..618284	+	404	71893838	pgk	MHJ_0487	-	phosphoglycerate kinase
480	 24.31	-1	618459..618713	+	84	71893839	-	MHJ_0488	-	hypothetical protein
481	 35.75	+1	618830..620812	+	660	71893840	fruA	MHJ_0489	-	PTS system, fructose-specific IIABC component
482	 23.51	-1	620812..621096	+	94	71893841	-	MHJ_0490	-	hypothetical protein
483	 33.87	+1	621108..622031	+	307	71893842	-	MHJ_0491	-	putative mannose-6-phosphate isomerase
484	 26.58	0	622335..623993	+	552	71893843	-	MHJ_0492	-	putative ISMHp1 transposase
485	 31.29	0	624355..629991	-	1878	71893844	-	MHJ_0493	-	putative P216 surface protein
486	 33.26	0	630118..634401	-	1427	71893845	-	MHJ_0494	-	putative p76 membrane protein precursor
487	 23.06	-1	634692..635918	-	408	71893846	-	MHJ_0495	-	hypothetical protein
29.24	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.