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IslandPath Analysis: Mycoplasma hyopneumoniae J

Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).

A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 29.24 STD DEV: 4.17

Mycoplasma hyopneumoniae J, complete genome - 1..897405
665 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
305	 26.58	0	377193..378851	-	552	71893664	-	MHJ_0310	-	putative ISMHp1 transposase
306	 27.49	0	379203..380228	+	341	71893665	-	MHJ_0311	-	hypothetical protein
307	 24.25	-1	380248..381579	+	443	71893666	-	MHJ_0312	-	hypothetical protein
308	 33.33	0	382033..382269	+	78	71893667	-	MHJ_0313	-	hypothetical protein
309	 26.47	0	382692..384149	-	485	71893668	-	MHJ_0314	-	hypothetical protein
310	 22.88	-1	384154..384813	-	219	71893669	-	MHJ_0315	-	hypothetical protein
311	 30.68	0	385311..385574	+	87	71893670	-	MHJ_0316	-	hypothetical protein
312	 20.37	-2	385706..385975	-	89	71893671	-	MHJ_0317	-	hypothetical protein
313	 24.48	-1	386038..386466	-	142	71893672	-	MHJ_0318	-	hypothetical protein
314	 25.02	-1	386475..387917	-	480	71893673	-	MHJ_0319	-	hypothetical protein
315	 22.26	-1	388065..388967	-	300	71893674	-	MHJ_0320	-	hypothetical protein
316	 21.18	-1	389055..389984	-	309	71893675	-	MHJ_0321	-	hypothetical protein
317	 33.55	+1	389986..390894	-	302	71893676	-	MHJ_0322	-	hypothetical protein
318	 23.86	-1	391214..391477	+	87	71893677	-	MHJ_0323	-	hypothetical protein
319	 31.44	0	391532..392164	-	210	71893678	-	MHJ_0324	-	hypothetical protein
320	 29.02	0	392553..393641	+	362	71893679	-	MHJ_0325	-	hypothetical protein
321	 31.33	0	393711..394358	+	215	71893680	-	MHJ_0326	-	hypothetical protein
322	 25.54	0	394895..395356	-	153	71893681	-	MHJ_0327	-	hypothetical protein
323	 27.76	0	395837..396589	+	250	71893682	-	MHJ_0328	-	hypothetical protein
324	 26.40	0	396657..398315	-	552	71893683	-	MHJ_0329	-	putative transposase
325	 25.40	0	399163..400422	-	419	71893684	-	MHJ_0330	-	hypothetical protein
326	 21.50	-1	400637..401422	-	261	71893685	-	MHJ_0331	-	hypothetical protein
327	 27.37	0	402065..404461	-	798	71893686	-	MHJ_0332	-	hypothetical protein
328	 25.17	0	405169..407556	-	795	71893687	-	MHJ_0333	-	putative ABC transporter ATP-binding protein
329	 22.19	-1	407543..409399	-	618	71893688	-	MHJ_0334	-	hypothetical protein
330	 31.99	0	409435..410103	-	222	71893689	-	MHJ_0335	-	hypothetical protein
331	 31.36	0	411710..412723	-	337	71893690	-	MHJ_0337	-	hypothetical protein
332	 32.82	0	413306..413500	-	64	71893691	-	MHJ_0338	-	hypothetical protein
333	 26.98	0	413711..414025	+	104	71893692	-	MHJ_0339	-	hypothetical protein
334	 28.03	0	414028..414630	+	200	71893693	-	MHJ_0340	-	hypothetical protein
335	 22.78	-1	414651..415721	+	356	71893694	-	MHJ_0341	-	hypothetical protein
336	 25.52	0	416857..417714	-	285	71893695	-	MHJ_0342	-	hypothetical protein
337	 16.67	-2	418260..418535	-	91	71893696	-	MHJ_0343	-	hypothetical protein
338	 24.03	-1	418712..419539	-	275	71893697	-	MHJ_0344	-	hypothetical protein
339	 21.01	-1	419702..420691	-	329	71893698	-	MHJ_0345	-	hypothetical protein
340	 24.98	-1	420694..422034	-	446	71893699	-	MHJ_0346	-	hypothetical protein
341	 28.13	0	422146..424299	+	717	71893700	-	MHJ_0347	-	hypothetical protein
342	 29.71	0	424315..425913	+	532	71893701	-	MHJ_0348	-	putative P60-like lipoprotein
343	 24.32	-1	425945..426277	+	110	71893702	hit	MHJ_0349	-	HIT-like protein
344	 27.21	0	426332..427981	-	549	71893703	-	MHJ_0350	-	hypothetical protein
345	 27.65	0	428092..429111	-	339	71893704	-	MHJ_0351	-	hypothetical protein
346	 24.86	-1	429120..429650	-	176	71893705	-	MHJ_0352	-	hypothetical protein
347	 30.06	0	429765..431321	+	518	71893706	-	MHJ_0353	-	putative amino acid permease
348	 32.13	0	431698..432444	-	248	71893707	glpF	MHJ_0354	-	glycerol uptake facilitator protein
349	 34.31	+1	432458..433990	-	510	71893708	glpK	MHJ_0355	-	glycerol kinase
350	 30.96	0	434330..435595	+	421	71893709	-	MHJ_0356	-	putative P37-like ABC transporter substrate-binding lipoprotein
351	 26.72	0	435579..436349	+	256	71893710	-	MHJ_0357	-	putative ABC transporter ATP-binding protein
352	 25.44	0	436327..438048	+	573	71893711	-	MHJ_0358	-	putative ABC transport system permease protein p69 - like
353	 29.35	0	438156..438632	+	158	71893712	-	MHJ_0359	-	hypothetical protein
354	 24.01	-1	438650..439936	+	428	71893713	-	MHJ_0360	-	hypothetical protein
355	 22.94	-1	439948..440784	+	278	71893714	-	MHJ_0361	-	hypothetical protein
356	 30.46	0	441117..443312	+	731	71893715	-	MHJ_0362	-	putative lipoprotein
357	 32.18	0	443369..445444	+	691	71893716	-	MHJ_0363	-	putative lipoprotein
358	 29.26	0	445471..446403	+	310	71893717	-	MHJ_0364	-	putative lipoprotein
359	 30.44	0	446522..448594	+	690	71893718	-	MHJ_0365	-	putative ABC transporter permease protein
360	 34.13	+1	448603..449604	+	333	71893719	-	MHJ_0366	-	putative ABC transport permease protein
361	 36.23	+1	449600..450532	+	310	71893720	-	MHJ_0367	-	putative ABC transporter permease protein
362	 29.05	0	450864..453737	-	957	71893721	-	MHJ_0368	-	putative Lppt protein
363	 27.50	0	453750..456698	-	982	71893722	-	MHJ_0369	-	hypothetical protein
364	 32.92	0	456869..457348	-	159	71893723	sgaA	MHJ_0370	-	PTS system, IIA component
365	 33.68	+1	457373..457663	-	96	71893724	-	MHJ_0371	-	putative PTS system enzyme IIB component
366	 35.65	+1	458086..459855	-	589	71893725	ulaA	MHJ_0372	-	ascorbate-specific PTS system enzyme IIC
367	 35.61	+1	459953..461005	-	350	71893726	-	MHJ_0373	-	hypothetical protein
368	 32.40	0	461191..463005	-	604	71893727	-	MHJ_0374	-	putative lipoprotein
369	 25.69	0	463146..464309	+	387	71893728	-	MHJ_0375	-	putative ABC transport ATP-binding protein
370	 28.06	0	464305..465234	+	309	71893729	-	MHJ_0376	-	putative ABC transporter permease protein
371	 22.83	-1	465230..466057	+	275	71893730	-	MHJ_0377	-	putative ABC transporter permease protein
372	 26.82	0	466127..466633	+	168	71893731	-	MHJ_0378	-	putative proline dipeptidase
373	 29.16	0	466743..469043	+	766	71893732	-	MHJ_0379	-	putative ABC transporter ATP-binding protein
374	 32.73	0	469140..469472	-	110	71893733	-	MHJ_0380	-	thioredoxin
375	 30.90	0	469539..470978	-	479	71893734	proS	MHJ_0381	-	prolyl-tRNA synthetase
376	 25.87	0	473202..474929	+	575	71893735	-	MHJ_0383	-	putative type III restriction-modification system: methylase
377	 23.80	-1	474947..477379	+	810	71893736	-	MHJ_0384	-	hypothetical protein
378	 23.25	-1	478192..478419	-	75	71893737	-	MHJ_0385	-	putative transposase
379	 30.07	0	478477..478629	-	50	71893738	-	MHJ_0386	-	putative partial transposase
380	 24.93	-1	478604..479305	-	233	71893739	-	MHJ_0387	-	putative partial transposase
381	 21.11	-1	479478..479657	-	59	71893740	-	MHJ_0388	-	hypothetical protein
382	 22.40	-1	479807..480739	+	310	71893741	-	MHJ_0389	-	hypothetical protein
383	 23.25	-1	480789..481016	-	75	71893742	-	MHJ_0390	-	putative transposase
384	 25.90	0	481201..481698	-	165	71893743	-	MHJ_0391	-	putative partial transposase
385	 24.89	-1	481640..481864	-	74	71893744	-	MHJ_0392	-	putative parital transposase
386	 20.56	-2	482037..482216	-	59	71893745	-	MHJ_0393	-	hypothetical protein
387	 20.69	-2	482355..483161	-	268	71893746	-	MHJ_0394	-	hypothetical protein
388	 23.86	-1	483185..483976	-	263	71893747	-	MHJ_0395	-	hypothetical protein
389	 21.95	-1	484167..484904	-	245	71893748	-	MHJ_0396	-	hypothetical protein
390	 27.75	0	484906..485496	-	196	71893749	-	MHJ_0397	-	hypothetical protein
391	 22.84	-1	485839..487020	-	393	71893750	-	MHJ_0398	-	hypothetical protein
392	 25.00	-1	489229..489444	+	71	71893751	-	MHJ_0400	-	hypothetical protein
393	 27.31	0	489474..489905	+	143	71893752	-	MHJ_0401	-	hypothetical protein
394	 23.85	-1	489946..490272	+	108	71893753	-	MHJ_0402	-	hypothetical protein
395	 26.09	0	490301..491680	-	459	71893754	-	MHJ_0403	-	hypothetical protein
396	 31.97	0	492459..492899	+	146	71893755	-	MHJ_0404	-	cell division protein MraZ
397	 31.65	0	492901..493791	+	296	71893756	-	MHJ_0405	-	putative S-adenosyl-methyltransferase
398	 29.92	0	493840..494805	+	321	71893757	ftsZ	MHJ_0406	-	cell division protein ftsZ
399	 34.02	+1	495034..496047	+	337	71893758	-	MHJ_0407	-	nicotinate phosphoribosyltransferase
400	 29.88	0	496055..496807	+	250	71893759	-	MHJ_0408	-	putative DNA methylase
401	 27.04	0	496800..498341	+	513	71893760	metG	MHJ_0409	-	methionyl-tRNA synthetase
402	 24.89	-1	498338..499213	-	291	71893761	-	MHJ_0410	-	hypothetical protein
403	 30.70	0	499414..500097	-	227	71893762	rnc	MHJ_0411	-	ribonuclease III
404	 26.88	0	500162..500719	-	185	71893763	-	MHJ_0412	-	hypothetical protein
29.24	MEAN

4.17	STD DEV

Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.