IslandPathversion 1.0

IslandPath Analysis: Mycoplasma hyopneumoniae J



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 29.24 STD DEV: 4.17
Mycoplasma hyopneumoniae J, complete genome - 1..897405
665 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
273	 29.78	0	331057..331422	-	121	71893632	rplS	MHJ_0276	-	50S ribosomal protein L19
274	 30.70	0	331476..332159	-	227	71893633	trmD	MHJ_0277	-	tRNA (guanine-N1)-methyltransferase
275	 34.46	+1	332181..332447	-	88	71893634	rpsP	MHJ_0278	-	30S ribosomal protein S16
276	 28.70	0	332735..333187	-	150	71893635	-	MHJ_0279	-	hypothetical protein
277	 26.53	0	333347..335404	-	685	71893636	-	MHJ_0280	-	putative ABC transporter ATP-binding protein
278	 21.73	-1	335642..337528	-	628	71893637	-	MHJ_0281	-	hypothetical protein
279	 33.33	0	337532..338071	-	179	71893638	-	MHJ_0282	-	hypothetical protein
280	 25.67	0	338677..339198	+	173	71893639	-	MHJ_0283	-	hypothetical protein
281	 29.89	0	339318..340421	-	367	71893640	ychF	MHJ_0284	-	translation-associated GTPase
282	 34.09	+1	340431..340694	-	87	161611220	rpsR	MHJ_0285	-	30S ribosomal protein S18
283	 34.22	+1	340712..341272	-	186	71893642	ssb	MHJ_0286	-	single-strand binding protein
284	 31.27	0	341290..342015	-	241	71893643	rpsF	MHJ_0287	-	30S ribosomal protein S6
285	 24.85	-1	342721..343863	-	380	71893644	-	MHJ_0288	-	hypothetical protein
286	 27.97	0	343902..344666	-	254	71893645	-	MHJ_0289	-	hypothetical protein
287	 24.83	-1	344847..345599	+	250	71893646	-	MHJ_0290	-	hypothetical protein
288	 26.78	0	346450..347547	+	365	71893647	-	MHJ_0291	-	hypothetical protein
289	 27.78	0	347703..348098	+	131	71893648	-	MHJ_0292	-	hypothetical protein
290	 25.53	0	348157..348579	+	140	71893649	-	MHJ_0293	-	hypothetical protein
291	 30.26	0	348732..350165	+	477	71893650	-	MHJ_0294	-	putative permease
292	 27.07	0	350158..350892	+	244	71893651	ugpQ	MHJ_0295	-	glycerophosphoryl diester phosphodiesterase
293	 25.04	-1	351466..353418	-	650	71893652	-	MHJ_0297	-	putative ABC transporter ATP-binding protein
294	 25.27	0	353495..355777	-	760	71893653	-	MHJ_0298	-	putative ABC transporter ATP-binding protein
295	 30.70	0	355743..356654	-	303	71893654	-	MHJ_0299	-	hypothetical protein
296	 26.73	0	357335..363076	+	1913	71893655	-	MHJ_0300	-	hypothetical protein
297	 30.78	0	363383..364555	-	390	71893656	baiH	MHJ_0301	-	NADH-dependent flavin oxidoreductase
298	 27.91	0	364558..365589	-	343	71893657	lplA-1	MHJ_0302	-	lipoate-protein ligase A
299	 25.03	-1	365592..366434	-	280	71893658	-	MHJ_0303	-	hypothetical protein
300	 26.13	0	366436..366768	-	110	71893659	-	MHJ_0304	-	putative glycine cleavage system H protein
301	 31.14	0	367181..368002	+	273	71893660	-	MHJ_0305	-	hypothetical protein
302	 26.00	0	368005..370323	+	772	71893661	-	MHJ_0306	-	putative ABC transporter ATP-binding protein
303	 24.27	-1	370415..372367	+	650	71893662	-	MHJ_0307	-	putative ABC transporter ATP-binding protein
304	 25.54	0	374223..376634	+	803	71893663	-	MHJ_0309	-	hypothetical protein
305	 26.58	0	377193..378851	-	552	71893664	-	MHJ_0310	-	putative ISMHp1 transposase
306	 27.49	0	379203..380228	+	341	71893665	-	MHJ_0311	-	hypothetical protein
307	 24.25	-1	380248..381579	+	443	71893666	-	MHJ_0312	-	hypothetical protein
308	 33.33	0	382033..382269	+	78	71893667	-	MHJ_0313	-	hypothetical protein
309	 26.47	0	382692..384149	-	485	71893668	-	MHJ_0314	-	hypothetical protein
310	 22.88	-1	384154..384813	-	219	71893669	-	MHJ_0315	-	hypothetical protein
311	 30.68	0	385311..385574	+	87	71893670	-	MHJ_0316	-	hypothetical protein
312	 20.37	-2	385706..385975	-	89	71893671	-	MHJ_0317	-	hypothetical protein
313	 24.48	-1	386038..386466	-	142	71893672	-	MHJ_0318	-	hypothetical protein
314	 25.02	-1	386475..387917	-	480	71893673	-	MHJ_0319	-	hypothetical protein
315	 22.26	-1	388065..388967	-	300	71893674	-	MHJ_0320	-	hypothetical protein
316	 21.18	-1	389055..389984	-	309	71893675	-	MHJ_0321	-	hypothetical protein
317	 33.55	+1	389986..390894	-	302	71893676	-	MHJ_0322	-	hypothetical protein
318	 23.86	-1	391214..391477	+	87	71893677	-	MHJ_0323	-	hypothetical protein
319	 31.44	0	391532..392164	-	210	71893678	-	MHJ_0324	-	hypothetical protein
320	 29.02	0	392553..393641	+	362	71893679	-	MHJ_0325	-	hypothetical protein
321	 31.33	0	393711..394358	+	215	71893680	-	MHJ_0326	-	hypothetical protein
322	 25.54	0	394895..395356	-	153	71893681	-	MHJ_0327	-	hypothetical protein
323	 27.76	0	395837..396589	+	250	71893682	-	MHJ_0328	-	hypothetical protein
324	 26.40	0	396657..398315	-	552	71893683	-	MHJ_0329	-	putative transposase
325	 25.40	0	399163..400422	-	419	71893684	-	MHJ_0330	-	hypothetical protein
326	 21.50	-1	400637..401422	-	261	71893685	-	MHJ_0331	-	hypothetical protein
327	 27.37	0	402065..404461	-	798	71893686	-	MHJ_0332	-	hypothetical protein
328	 25.17	0	405169..407556	-	795	71893687	-	MHJ_0333	-	putative ABC transporter ATP-binding protein
329	 22.19	-1	407543..409399	-	618	71893688	-	MHJ_0334	-	hypothetical protein
330	 31.99	0	409435..410103	-	222	71893689	-	MHJ_0335	-	hypothetical protein
331	 31.36	0	411710..412723	-	337	71893690	-	MHJ_0337	-	hypothetical protein
332	 32.82	0	413306..413500	-	64	71893691	-	MHJ_0338	-	hypothetical protein
333	 26.98	0	413711..414025	+	104	71893692	-	MHJ_0339	-	hypothetical protein
334	 28.03	0	414028..414630	+	200	71893693	-	MHJ_0340	-	hypothetical protein
335	 22.78	-1	414651..415721	+	356	71893694	-	MHJ_0341	-	hypothetical protein
336	 25.52	0	416857..417714	-	285	71893695	-	MHJ_0342	-	hypothetical protein
337	 16.67	-2	418260..418535	-	91	71893696	-	MHJ_0343	-	hypothetical protein
338	 24.03	-1	418712..419539	-	275	71893697	-	MHJ_0344	-	hypothetical protein
339	 21.01	-1	419702..420691	-	329	71893698	-	MHJ_0345	-	hypothetical protein
340	 24.98	-1	420694..422034	-	446	71893699	-	MHJ_0346	-	hypothetical protein
341	 28.13	0	422146..424299	+	717	71893700	-	MHJ_0347	-	hypothetical protein
342	 29.71	0	424315..425913	+	532	71893701	-	MHJ_0348	-	putative P60-like lipoprotein
343	 24.32	-1	425945..426277	+	110	71893702	hit	MHJ_0349	-	HIT-like protein
344	 27.21	0	426332..427981	-	549	71893703	-	MHJ_0350	-	hypothetical protein
345	 27.65	0	428092..429111	-	339	71893704	-	MHJ_0351	-	hypothetical protein
346	 24.86	-1	429120..429650	-	176	71893705	-	MHJ_0352	-	hypothetical protein
347	 30.06	0	429765..431321	+	518	71893706	-	MHJ_0353	-	putative amino acid permease
348	 32.13	0	431698..432444	-	248	71893707	glpF	MHJ_0354	-	glycerol uptake facilitator protein
349	 34.31	+1	432458..433990	-	510	71893708	glpK	MHJ_0355	-	glycerol kinase
350	 30.96	0	434330..435595	+	421	71893709	-	MHJ_0356	-	putative P37-like ABC transporter substrate-binding lipoprotein
351	 26.72	0	435579..436349	+	256	71893710	-	MHJ_0357	-	putative ABC transporter ATP-binding protein
352	 25.44	0	436327..438048	+	573	71893711	-	MHJ_0358	-	putative ABC transport system permease protein p69 - like
353	 29.35	0	438156..438632	+	158	71893712	-	MHJ_0359	-	hypothetical protein
354	 24.01	-1	438650..439936	+	428	71893713	-	MHJ_0360	-	hypothetical protein
355	 22.94	-1	439948..440784	+	278	71893714	-	MHJ_0361	-	hypothetical protein
356	 30.46	0	441117..443312	+	731	71893715	-	MHJ_0362	-	putative lipoprotein
357	 32.18	0	443369..445444	+	691	71893716	-	MHJ_0363	-	putative lipoprotein
358	 29.26	0	445471..446403	+	310	71893717	-	MHJ_0364	-	putative lipoprotein
359	 30.44	0	446522..448594	+	690	71893718	-	MHJ_0365	-	putative ABC transporter permease protein
360	 34.13	+1	448603..449604	+	333	71893719	-	MHJ_0366	-	putative ABC transport permease protein
361	 36.23	+1	449600..450532	+	310	71893720	-	MHJ_0367	-	putative ABC transporter permease protein
362	 29.05	0	450864..453737	-	957	71893721	-	MHJ_0368	-	putative Lppt protein
363	 27.50	0	453750..456698	-	982	71893722	-	MHJ_0369	-	hypothetical protein
364	 32.92	0	456869..457348	-	159	71893723	sgaA	MHJ_0370	-	PTS system, IIA component
365	 33.68	+1	457373..457663	-	96	71893724	-	MHJ_0371	-	putative PTS system enzyme IIB component
366	 35.65	+1	458086..459855	-	589	71893725	ulaA	MHJ_0372	-	ascorbate-specific PTS system enzyme IIC
367	 35.61	+1	459953..461005	-	350	71893726	-	MHJ_0373	-	hypothetical protein
368	 32.40	0	461191..463005	-	604	71893727	-	MHJ_0374	-	putative lipoprotein
369	 25.69	0	463146..464309	+	387	71893728	-	MHJ_0375	-	putative ABC transport ATP-binding protein
370	 28.06	0	464305..465234	+	309	71893729	-	MHJ_0376	-	putative ABC transporter permease protein
371	 22.83	-1	465230..466057	+	275	71893730	-	MHJ_0377	-	putative ABC transporter permease protein
372	 26.82	0	466127..466633	+	168	71893731	-	MHJ_0378	-	putative proline dipeptidase
29.24	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.