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IslandPath Analysis: Mycoplasma genitalium G37

Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).

A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 31.58 STD DEV: 3.61

Mycoplasma genitalium G37, complete genome - 1..580076
477 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
97	 32.25	0	123580..124317	+	245	12044949	ung	MG_097	-	uracil-DNA glycosylase
98	 31.38	0	124417..125850	+	477	12044950	-	MG_098	-	aspartyl/glutamyl-tRNA amidotransferase subunit C-like protein
99	 32.15	0	125853..127286	+	477	12044951	gatA	MG_099	-	aspartyl/glutamyl-tRNA amidotransferase subunit A
100	 31.66	0	127279..128712	+	477	12044952	gatB	MG_100	-	aspartyl/glutamyl-tRNA amidotransferase subunit B
101	 33.78	0	128687..129355	+	222	12044953	-	MG_101	-	hypothetical protein
102	 33.02	0	129348..130295	+	315	12044954	trxB	MG_102	-	thioredoxin-disulfide reductase
103	 27.76	-1	130285..131127	+	280	12044955	-	MG_103	-	hypothetical protein
104	 32.48	0	131149..131382	+	77	108885119	secG	MG_476	-	preprotein translocase subunit SecG
105	 33.24	0	131385..133562	+	725	12044956	vacB	MG_104	-	ribonuclease R
106	 31.01	0	133570..134172	+	200	108885084	-	MG_105	-	hypothetical protein
107	 31.96	0	134147..134728	-	193	108885085	def	MG_106	-	peptide deformylase
108	 31.05	0	134769..135338	+	189	12044959	gmk	MG_107	-	guanylate kinase
109	 29.25	0	135338..136120	+	260	12044960	-	MG_108	-	protein phosphatase 2C, putative
110	 32.39	0	136105..137268	+	387	108885086	-	MG_109	-	serine/threonine protein kinase, putative
111	 29.27	0	137255..138091	+	278	12044962	-	MG_110	-	ribosome small subunit-dependent GTPase A
112	 31.33	0	138112..139407	+	431	161579581	pgi	MG_111	-	glucose-6-phosphate isomerase
113	 31.11	0	139397..140026	+	209	12044964	-	MG_112	-	ribulose-phosphate 3-epimerase
114	 32.97	0	140040..141410	+	456	12044965	asnC	MG_113	-	asparaginyl-tRNA synthetase
115	 31.65	0	141346..142056	+	236	12044966	pgsA	MG_114	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
116	 34.39	0	142081..142554	+	157	12044967	-	MG_115	-	competence/damage inducible protein CinA
117	 29.89	0	142563..143318	+	251	12044968	-	MG_116	-	hypothetical protein
118	 30.85	0	143311..143955	+	214	12044969	-	MG_117	-	hypothetical protein
119	 30.40	0	143936..144958	+	340	12044970	galE	MG_118	-	UDP-glucose 4-epimerase
120	 32.15	0	144973..146667	+	564	12044971	mglA	MG_119	-	ABC transporter, ATP-binding protein
121	 32.69	0	146674..148236	+	520	12044972	-	MG_120	-	ABC transporter, permease protein
122	 35.18	0	148239..149159	+	306	12044973	-	MG_121	-	ABC transporter, permease protein
123	 33.38	0	149199..151328	+	709	12044974	topA	MG_122	-	DNA topoisomerase I
124	 28.81	0	151306..152721	+	471	12044975	-	MG_123	-	hypothetical protein
125	 33.33	0	152768..153076	+	102	12044976	trxA	MG_124	-	thioredoxin
126	 29.60	0	153082..153939	+	285	12044977	-	MG_125	-	Cof-like hydrolase, putative
127	 30.56	0	153920..154963	-	347	12044978	trpS	MG_126	-	tryptophanyl-tRNA synthetase
128	 31.51	0	154999..155436	+	145	12044979	-	MG_127	-	Spx subfamily protein
129	 33.59	0	155444..156223	+	259	12044980	ppnK	MG_128	-	inorganic polyphosphate/ATP-NAD kinase
130	 27.97	-1	156223..156576	+	117	12044981	-	MG_129	-	hypothetical protein
131	 30.03	0	156566..158020	+	484	12044982	-	MG_130	-	hypothetical protein
132	 31.92	0	158581..159006	-	141	12044984	-	MG_132	-	HIT domain-containing protein
133	 29.43	0	158984..159778	-	264	108885087	-	MG_133	-	hypothetical protein
134	 32.67	0	159798..160100	+	100	12044986	-	MG_134	-	hypothetical protein
135	 31.44	0	160072..160914	-	280	12044987	-	MG_135	-	hypothetical protein
136	 32.72	0	160963..162435	+	490	12044988	lysS	MG_136	-	lysyl-tRNA synthetase
137	 31.28	0	162377..163591	+	404	12044989	glf	MG_137	-	UDP-galactopyranose mutase
138	 33.44	0	163591..165387	+	598	12044990	lepA	MG_138	-	GTP-binding protein LepA
139	 34.21	0	165471..167180	+	569	12044991	-	MG_139	-	metallo-beta-lactamase superfamily protein
140	 33.18	0	175805..179146	+	1113	12044992	-	MG_140	-	hypothetical protein
141	 32.52	0	179151..180746	+	531	12044993	nusA	MG_141	-	transcription elongation factor NusA
142	 30.40	0	180746..181018	+	90	108885120	-	MG_477	-	hypothetical protein
143	 34.89	0	181005..182864	+	619	12044994	infB	MG_142	-	translation initiation factor IF-2
144	 32.45	0	182851..183189	+	112	12044995	-	MG_143	-	ribosome-binding factor A
145	 32.02	0	183214..184053	+	279	12044996	-	MG_144	-	hypothetical protein
146	 30.49	0	184053..184862	+	269	12044997	-	MG_145	-	riboflavin biosynthesis protein RibF
147	 31.69	0	184875..186149	+	424	12044998	-	MG_146	-	hypothetical protein
148	 32.09	0	186136..187263	+	375	108885088	-	MG_147	-	hypothetical protein
149	 29.92	0	187302..188531	+	409	12045000	-	MG_148	-	hypothetical protein
150	 33.33	0	188607..189452	+	281	12045001	-	MG_149	-	putative lipoprotein
151	 29.89	0	189492..189956	+	154	108885089	-	MG_478	-	hypothetical protein
152	 36.45	+1	190046..190366	+	106	12045003	rpsJ	MG_150	-	30S ribosomal protein S10
153	 38.76	+1	190370..191143	+	257	12045004	rplC	MG_151	-	50S ribosomal protein L3
154	 36.79	+1	191143..191778	+	211	12045005	rplD	MG_152	-	50S ribosomal protein L4
155	 34.58	0	191782..192102	+	106	12045006	rplW	MG_153	-	50S ribosomal protein L23
156	 40.33	+2	192102..192959	+	285	12045007	rplB	MG_154	-	50S ribosomal protein L2
157	 36.36	+1	192959..193222	+	87	12045008	rpsS	MG_155	-	30S ribosomal protein S19
158	 36.32	+1	193225..193659	+	144	12045009	rplV	MG_156	-	50S ribosomal protein L22
159	 39.03	+2	193662..194468	+	268	12045010	rpsC	MG_157	-	30S ribosomal protein S3
160	 41.01	+2	194474..194890	+	138	12045011	rplP	MG_158	-	50S ribosomal protein L16
161	 32.50	0	194890..195492	+	200	12045012	rpmC	MG_159	-	50S ribosomal protein L29
162	 37.21	+1	195492..195749	+	85	12045013	rpsQ	MG_160	-	30S ribosomal protein S17
163	 38.48	+1	195753..196121	+	122	12045014	rplN	MG_161	-	50S ribosomal protein L14
164	 35.47	+1	196121..196447	+	108	12045015	rplX	MG_162	-	50S ribosomal protein L24
165	 36.65	+1	196453..196995	+	180	12045016	rplE	MG_163	-	50S ribosomal protein L5
166	 41.94	+2	196998..197183	+	61	12045017	rpsN	MG_164	-	30S ribosomal protein S14
167	 33.80	0	197177..197602	+	141	12045018	rpsH	MG_165	-	30S ribosomal protein S8
168	 34.77	0	197609..198163	+	184	12045019	rplF	MG_166	-	50S ribosomal protein L6
169	 35.63	+1	198165..198512	+	115	12045020	rplR	MG_167	-	50S ribosomal protein L18
170	 38.84	+2	198517..199152	+	211	12045021	rpsE	MG_168	-	30S ribosomal protein S5
171	 37.75	+1	199158..199610	+	150	12045022	rplO	MG_169	-	50S ribosomal protein L15
172	 39.64	+2	199610..201037	+	475	12045023	secY	MG_170	-	preprotein translocase subunit SecY
173	 33.95	0	201031..201675	+	214	12045024	adk	MG_171	-	adenylate kinase
174	 35.61	+1	201678..202424	+	248	12045025	map	MG_172	-	methionine aminopeptidase, type I
175	 37.09	+1	202424..202636	+	70	12045026	infA	MG_173	-	translation initiation factor IF-1
176	 37.72	+1	202647..202760	+	37	12045027	rpmJ	MG_174	-	50S ribosomal protein L36
177	 39.20	+2	202760..203134	+	124	12045028	rpsM	MG_175	-	30S ribosomal protein S13
178	 44.26	+2	203134..203499	+	121	108885090	rpS11	MG_176	-	30S ribosomal protein S11
179	 37.79	+1	203515..204501	+	328	12045030	rpoA	MG_177	-	DNA-directed RNA polymerase subunit alpha
180	 36.02	+1	204514..204885	+	123	12045031	rplQ	MG_178	-	50S ribosomal protein L17
181	 35.64	+1	204872..205696	+	274	12045032	-	MG_179	-	cobalt transporter ATP-binding subunit
182	 36.94	+1	205681..206595	+	304	12045033	-	MG_180	-	cobalt transporter ATP-binding subunit
183	 35.55	+1	206588..207850	+	420	12045034	-	MG_181	-	metal ion ABC transporter, permease protein
184	 34.83	0	207843..208577	+	244	12045035	truA	MG_182	-	tRNA pseudouridine synthase A
185	 32.18	0	208567..210390	+	607	12045036	pepF	MG_183	-	oligoendopeptidase F
186	 30.40	0	210391..211344	+	317	12045037	-	MG_184	-	adenine-specific DNA modification methylase
187	 32.62	0	211444..213549	+	701	12045038	-	MG_185	-	putative lipoprotein
188	 36.39	+1	216016..216768	+	250	12045039	-	MG_186	-	nuclease-like protein
189	 33.79	0	216761..218518	+	585	12045040	-	MG_187	-	ABC transporter, ATP-binding protein
190	 37.68	+1	218521..219510	+	329	12045041	-	MG_188	-	ABC transporter, permease protein
191	 36.15	+1	219482..220438	+	318	108885091	-	MG_189	-	ABC transporter, permease protein
192	 33.54	0	220607..221563	+	318	108885092	mgpA	MG_190	-	DHH family phosphoesterase
193	 39.86	+2	221570..225904	+	1444	12045044	mgpB	MG_191	-	MgPa adhesin
194	 40.70	+2	225906..229067	+	1053	108885093	mgpC	MG_192	-	P110 protein
195	 33.04	0	232009..233034	+	341	12045046	pheS	MG_194	-	phenylalanyl-tRNA synthetase subunit alpha
196	 32.42	0	233038..235458	+	806	12045047	pheT	MG_195	-	phenylalanyl-tRNA synthetase subunit beta
31.58	MEAN

3.61	STD DEV

Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.