version 1.0
Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome - 1..1010023 812 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 9 25.86 0 8455..9096 + 213 83319417 tmk MCAP_0010 - thymidylate kinase 10 18.01 -1 9074..9817 + 247 83319611 - MCAP_0011 - DNA polymerase III, delta prime subunit 11 22.47 0 9877..10539 + 220 83319521 - MCAP_0012 - N-6 adenine-specific DNA methylases, putative 12 23.48 0 10590..11411 + 273 83319854 - MCAP_0013 - hypothetical protein 13 17.41 -1 11416..12621 + 401 83319710 - MCAP_0014 - hypothetical protein 14 20.43 0 12618..13454 - 278 83320027 - MCAP_0015 - hypothetical protein 15 29.90 +1 13687..15639 + 650 83319940 ftsH MCAP_0017 - ATP-dependent metalloprotease FtsH 16 23.79 0 16712..22105 - 1797 83319828 - MCAP_0018 - hypothetical protein 17 22.32 0 22249..25407 + 1052 83320018 - MCAP_0019 - hypothetical protein 18 21.91 0 25583..26449 + 288 83319749 hslO MCAP_0020 - chaperonin HSP33 19 27.36 0 26497..27534 + 345 83319807 - MCAP_0021 - ABC transporter, ATP-binding protein 20 27.67 0 27586..28185 - 199 83319505 - MCAP_0022 - acyl carrier protein phosphodiesterase, putative 21 23.67 0 28374..28580 + 68 83319695 - MCAP_0023 - cold shock protein 22 24.64 0 28783..29196 + 137 83319327 rpsF MCAP_0024 - 30S ribosomal protein S6 23 29.93 +1 29212..29652 + 146 83319323 ssb MCAP_0025 - single-strand DNA-binding protein 24 24.12 0 29671..29898 + 75 83319872 rpsR MCAP_0026 - 30S ribosomal protein S18 25 23.90 0 30594..31982 + 462 83319435 - MCAP_0027 - hypothetical protein 26 27.41 0 32257..33810 + 517 83319352 - MCAP_0028 - PTS system, mannitol-specific IIBC component, putative 27 24.77 0 33810..34568 + 252 83320002 - MCAP_0029 - sorbitol-6-phosphate dehydrogenase 28 19.92 -1 34568..34813 + 81 83319928 - MCAP_0030 - PTS system, mannitol-specific IIA component, putative 29 21.43 0 35027..35824 + 265 83319840 - MCAP_0031 - RpiR family phosphosugar-binding transcriptional regulator , putative 30 19.70 -1 35825..36829 + 334 83319746 - MCAP_0032 - mannitol-1-phosphate 5-dehydrogenase, putative 31 26.24 0 36866..38458 - 530 83319296 - MCAP_0033 - lipoprotein, putative (LppA) 32 24.23 0 38483..40042 - 519 83319596 - MCAP_0034 - LppA family lipoprotein 33 23.40 0 40240..41769 + 509 83320001 metG MCAP_0035 - methionyl-tRNA synthetase 34 28.11 +1 43614..45221 + 535 83319838 - MCAP_0037 - ABC transporter, ATP-binding protein 35 22.82 0 45211..47769 + 852 83319467 - MCAP_0038 - ABC transporter, permease protein 36 28.83 +1 47772..48749 + 325 83319356 - MCAP_0039 - ABC transporter, permease protein 37 27.22 0 48817..51204 - 795 83319625 gyrA MCAP_0040 - DNA gyrase, A subunit 38 28.50 +1 51336..53240 - 634 83319520 gyrB MCAP_0041 - DNA gyrase, B subunit 39 23.78 0 53640..55241 - 533 83319266 - MCAP_0042 - putative lipoprotein 40 20.16 0 55409..56182 - 257 83319304 - MCAP_0043 - hypothetical protein 41 21.72 0 56166..56888 - 240 83319582 - MCAP_0044 - hypothetical protein 42 27.13 0 56998..59832 - 944 83319511 secA MCAP_0045 - preprotein translocase subunit SecA 43 18.58 -1 59912..60487 + 191 83319813 - MCAP_0046 - hypothetical protein 44 20.98 0 60583..61497 + 304 83319696 - MCAP_0047 - 5-3 exonuclease family protein 45 24.88 0 61692..62708 + 338 83319983 - MCAP_0048 - adenine-specific DNA methylase, putative 46 22.19 0 62638..63615 + 325 83319264 dam MCAP_0049 - DNA adenine methylase 47 25.48 0 63593..65170 + 525 83319365 - MCAP_0050 - restriction endonuclease 48 30.57 +1 66644..67114 + 156 83319665 - MCAP_0052 - hypothetical protein 49 22.83 0 67839..68114 + 91 83320006 - MCAP_0053 - hypothetical protein 50 19.93 -1 68104..68670 + 188 83320013 - MCAP_0054 - dephospho-CoA kinase 51 21.73 0 68672..69481 - 269 83319276 - MCAP_0055 - hemolysin A 52 23.15 0 69481..69696 - 71 83319277 - MCAP_0056 - hypothetical protein 53 22.89 0 69689..71095 - 468 83319530 xseA MCAP_0057 - exodeoxyribonuclease VII, large subunit 54 23.81 0 71097..71495 - 132 83319650 - MCAP_0058 - N utilization substance protein B (nusB), putative 55 22.50 0 71507..72577 - 356 83319506 - MCAP_0059 - putative lipoprotein 56 24.48 0 72604..73473 - 289 83319329 - MCAP_0060 - endonuclease IV 57 18.06 -1 73466..74218 - 250 83320034 - MCAP_0061 - riboflavin kinase / FAD synthetase family protein 58 21.84 0 74775..76349 + 524 83319717 - MCAP_0063 - glycosyl transferase, group 2 family protein 59 25.60 0 76352..77230 + 292 83319439 - MCAP_0064 - UTP-glucose-1-phosphate uridylyltransferase 60 31.93 +1 77432..77860 + 142 83319927 rplK MCAP_0065 - 50S ribosomal protein L11 61 29.37 +1 77860..78540 + 226 83319637 rplA MCAP_0066 - 50S ribosomal protein L1 62 31.33 +1 78769..79266 + 165 83319357 rplJ MCAP_0067 - 50S ribosomal protein L10 63 33.60 +2 79342..79710 + 122 83319793 rplL MCAP_0068 - 50S ribosomal protein L7/L12 64 18.33 -1 79881..81053 + 390 83319531 - MCAP_0069 - hypothetical protein 65 28.00 0 81043..84906 + 1287 83319487 rpoB MCAP_0070 - DNA-directed RNA polymerase subunit beta 66 29.25 +1 84918..88685 + 1255 83319423 rpoC MCAP_0071 - DNA-directed RNA polymerase beta' subunit 67 24.66 0 88775..90964 + 729 83319632 - MCAP_0072 - putative lipoprotein 68 27.12 0 90971..91276 - 101 83319742 - MCAP_0073 - hypothetical protein 69 26.91 0 91301..91798 + 165 83319834 - MCAP_0074 - ribose 5-phosphate isomerase B, putative 70 29.71 +1 91782..93023 + 413 83319931 glyA MCAP_0075 - serine hydroxymethyltransferase 71 30.29 +1 93125..93748 + 207 83319896 upp MCAP_0076 - uracil phosphoribosyltransferase 72 19.55 -1 93889..94287 + 132 83319999 - MCAP_0077 - hypothetical protein 73 23.93 0 94287..95147 + 286 83319402 atpB MCAP_0078 - F0F1 ATP synthase subunit A 74 31.37 +1 95186..95491 + 101 83319513 atpE MCAP_0079 - ATP synthase F0, subunit c 75 23.99 0 95519..96064 + 181 83319804 atpF MCAP_0080 - ATP synthase F0, B subunit 76 21.79 0 96066..96611 + 181 83319489 atpH MCAP_0081 - F0F1 ATP synthase subunit delta 77 29.85 +1 96623..98200 + 525 83319474 atpA1 MCAP_0082 - F0F1 ATP synthase subunit alpha 78 23.37 0 98202..99044 + 280 83319574 atpG MCAP_0083 - F0F1 ATP synthase subunit gamma 79 30.33 +1 99053..100483 + 476 83319730 atpD1 MCAP_0084 - F0F1 ATP synthase subunit beta 80 22.33 0 100483..100782 + 99 83320026 atpC MCAP_0085 - ATP synthase F1, epsilon subunit 81 22.44 0 100840..102051 - 403 83319904 - MCAP_0086 - hypothetical protein 82 26.12 0 102390..105218 + 942 83319358 mgtA MCAP_0087 - magnesium-translocating P-type ATPase 83 17.78 -1 105679..105813 - 44 83319328 - MCAP_0088 - hypothetical protein 84 29.79 +1 105998..107209 + 403 83319656 arcA MCAP_0089 - arginine deiminase 85 30.72 +1 107227..108222 + 331 83319698 arcB MCAP_0090 - ornithine carbamoyltransferase, catabolic 86 29.46 +1 108285..109754 + 489 83319593 - MCAP_0091 - transporter, putative 87 21.99 0 111276..112403 - 375 83319262 - MCAP_0093 - beta-lactamase, putative 88 31.07 +1 112508..114721 - 737 83319967 ptsG MCAP_0094 - PTS system, glucose-specific IIABC component 89 19.43 -1 115141..115629 - 162 83319512 - MCAP_0095 - hypothetical protein 90 19.69 -1 115629..116075 - 148 83319425 smpB MCAP_0096 - SsrA-binding protein 91 21.28 0 116085..118199 - 704 83319777 - MCAP_0097 - 3'-5' exoribonuclease 92 24.93 0 118235..118591 - 118 83319671 secG MCAP_0098 - preprotein translocase subunit SecG 93 28.53 +1 118773..119792 + 339 83319806 nrdF MCAP_0099 - ribonucleotide-diphosphate reductase subunit beta 94 27.00 0 119802..120275 + 157 83319863 nrdI MCAP_0100 - ribonucleotide reductase stimulatory protein 95 27.18 0 120262..122424 + 720 83319418 nrdE MCAP_0101 - ribonucleotide-diphosphate reductase subunit alpha 96 29.66 +1 122709..123743 + 344 83320003 prs MCAP_0104 - phosphoribosylpyrophosphate synthase 97 19.96 -1 124048..124608 + 186 83320028 pth MCAP_0105 - peptidyl-tRNA hydrolase 98 23.20 0 124739..125182 + 147 83319898 rplI MCAP_0106 - 50S ribosomal protein L9 99 27.46 0 125184..126512 + 442 83319407 dnaC MCAP_0107 - replicative DNA helicase 100 22.88 0 126601..127863 + 420 83319523 - MCAP_0108 - hypothetical protein 101 25.35 0 127990..128916 + 308 83319622 - MCAP_0109 - hypothetical protein 102 20.29 0 128925..130250 + 441 83319731 cysS MCAP_0110 - cysteinyl-tRNA synthetase 103 21.63 0 130252..130986 + 244 83319473 - MCAP_0111 - RNA methyltransferase 104 28.40 +1 131047..131208 + 53 83319914 rpmG MCAP_0112 - 50S ribosomal protein L33 105 21.27 0 131208..131522 + 104 83320011 secE MCAP_0113 - preprotein translocase, SecE subunit, putative 106 28.53 +1 131539..132183 + 214 83319581 nusG MCAP_0114 - transcription antitermination protein NusG 107 24.84 0 132631..138528 + 1965 83319484 - MCAP_0115 - hypothetical protein 108 25.75 0 138537..141491 + 984 83319343 - MCAP_0116 - oligopeptide ABC transporter, oligopeptide-binding protein, putative 24.05 MEAN 4.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.