version 1.0
Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome - 1..1010023 812 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 439 25.55 0 554703..555986 - 427 83319876 pgi MCAP_0465 - glucose-6-phosphate isomerase 440 22.78 0 556207..558102 - 631 83319496 pepO MCAP_0466 - endopeptidase O 441 18.07 -1 558116..558685 - 189 83319768 - MCAP_0467 - 5-formyltetrahydrofolate cyclo-ligase 442 20.32 0 558678..559115 - 145 83320031 - MCAP_0468 - hypothetical protein 443 22.60 0 559119..560357 - 412 83319944 - MCAP_0469 - aminotransferase, class V 444 25.78 0 560551..563544 + 997 83319431 - MCAP_0470 - putative lipoprotein 445 24.63 0 563566..565737 + 723 83319261 - MCAP_0471 - putative lipoprotein 446 20.71 0 565740..566135 + 131 83319570 - MCAP_0472 - HIT family protein 447 22.53 0 566171..567151 - 326 83319859 - MCAP_0473 - hypothetical protein 448 20.85 0 567220..567876 - 218 83319985 ung MCAP_0474 - uracil-DNA glycosylase 449 23.55 0 567869..568798 - 309 83319703 pmi MCAP_0475 - phosphomannose isomerase type I 450 25.28 0 568919..570235 - 438 83319822 gid MCAP_0476 - tRNA (uracil-5-)-methyltransferase Gid 451 23.54 0 570228..570911 - 227 83319533 - MCAP_0477 - copper homeostasis protein CutC, putative 452 26.63 0 570902..572065 - 387 83319655 metK MCAP_0478 - S-adenosylmethionine synthetase 453 25.97 0 572276..573049 - 257 83319258 - MCAP_0479 - hypothetical protein 454 17.84 -1 573037..573378 - 113 83319384 p13 MCAP_0480 - UPF0122 protein, putative 455 24.24 0 573362..574636 - 424 83319748 ftsY MCAP_0481 - signal recognition particle-docking protein FtsY 456 23.81 0 574705..575376 - 223 83319786 - MCAP_0482 - phosphate transport system regulatory protein PhoU, putative 457 26.42 0 575385..576194 - 269 83319542 pstB MCAP_0483 - phosphate ABC transporter, ATP-binding protein 458 22.14 0 576187..578277 - 696 83319640 - MCAP_0484 - phosphate ABC transporter, permease, putative 459 21.78 0 578281..579492 - 403 83319693 - MCAP_0485 - phosphate ABC transporter, phosphate-binding protein, putative 460 18.16 -1 579583..580017 - 144 83319383 - MCAP_0486 - hypothetical protein 461 30.30 +1 580246..580443 - 65 83319933 rpmB MCAP_0488 - 50S ribosomal protein L28 462 26.36 0 580603..580932 + 109 83319555 - MCAP_0489 - hypothetical protein 463 26.40 0 580962..582605 + 547 83319282 - MCAP_0490 - dihydroxyacetone kinase 2 domain-containing protein 464 26.67 0 582637..583641 + 334 83319479 plsX MCAP_0491 - putative glycerol-3-phosphate acyltransferase PlsX 465 24.46 0 583631..584329 + 232 83319588 - MCAP_0492 - ribonuclease III 466 29.29 +1 584513..584908 + 131 83319679 - MCAP_0493 - hypothetical protein 467 23.26 0 584911..585297 + 128 83319800 - MCAP_0494 - hypothetical protein 468 25.21 0 585624..588590 + 988 83319729 - MCAP_0495 - structural maintenance of chromosomes (SMC) superfamily protein 469 24.33 0 588629..590893 - 754 83319815 - MCAP_0496 - RelA/SpoT family protein 470 25.54 0 590953..591465 - 170 83319437 apt MCAP_0497 - adenine phosphoribosyltransferase 471 21.30 0 591477..595691 - 1404 83319955 - MCAP_0498 - hypothetical protein 472 22.82 0 595793..597304 - 503 83319610 - MCAP_0499 - hypothetical protein 473 21.29 0 597343..598704 - 453 83319293 - MCAP_0500 - DEAD-box ATP dependent DNA helicase 474 17.50 -1 598713..599489 - 258 83319709 - MCAP_0501 - hypothetical protein 475 19.32 -1 599476..600153 - 225 83319817 - MCAP_0502 - hypothetical protein 476 26.68 0 600156..601673 - 505 83319868 rpoD MCAP_0503 - RNA polymerase sigma factor RpoD 477 20.44 0 601676..603490 - 604 83319946 dnaG MCAP_0504 - DNA primase 478 24.36 0 603527..604897 - 456 83319862 glyS MCAP_0505 - glycyl-tRNA synthetase 479 18.27 -1 604961..605710 - 249 83319326 - MCAP_0506 - DNA repair protein RecO 480 21.96 0 605710..606615 - 301 83319405 era MCAP_0507 - GTP-binding protein Era 481 20.81 0 606618..607112 - 164 83319995 - MCAP_0508 - hypothetical protein 482 15.19 -2 607118..609007 - 629 83319878 - MCAP_0509 - peptidase C39 family protein 483 25.50 0 609000..609548 - 182 83319368 - MCAP_0510 - DJ-1 family protein 484 21.47 0 609596..614857 - 1753 83319322 - MCAP_0511 - hypothetical protein 485 23.44 0 617508..619751 + 747 83319406 - MCAP_0513 - putative lipoprotein 486 22.94 0 619809..622079 + 756 83319880 - MCAP_0514 - putative lipoprotein 487 23.89 0 622111..623349 - 412 83319965 - MCAP_0515 - recombination factor protein RarA 488 26.84 0 623462..625801 - 779 83319891 lon MCAP_0516 - ATP-dependent protease La 489 25.02 0 625920..627206 - 428 83319723 tig MCAP_0517 - trigger factor 490 19.80 -1 627223..627525 - 100 83319794 - MCAP_0518 - hypothetical protein 491 30.09 +1 627543..628097 - 184 83319745 efp MCAP_0519 - translation elongation factor P 492 23.38 0 628187..629140 - 317 83319576 fmt MCAP_0520 - methionyl-tRNA formyltransferase 493 20.65 0 629130..631274 - 714 83319463 - MCAP_0521 - hypothetical protein 494 23.30 0 631351..631968 - 205 83319952 - MCAP_0522 - hypothetical protein 495 23.40 0 632010..633137 - 375 83319617 trmU MCAP_0523 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 496 22.26 0 633233..634117 - 294 83320054 - MCAP_0524 - putative lipoprotein 497 22.74 0 634769..635542 - 257 83320052 - MCAP_0525 - putative lipoprotein 498 20.27 0 635564..636367 - 267 83319429 - MCAP_0526 - putative lipoprotein 499 22.79 0 636581..637225 - 214 83319354 - MCAP_0527 - hypothetical protein 500 19.34 -1 637250..637885 - 211 83319600 - MCAP_0528 - MTA/SAH nucleosidase 501 21.65 0 637908..639011 - 367 83319440 nadD MCAP_0529 - putative nicotinate-nucleotide adenylyltransferase 502 19.92 -1 639029..639274 - 81 83319788 - MCAP_0530 - hypothetical protein 503 26.64 0 639292..640053 - 253 83319278 - MCAP_0531 - NH3-dependent NAD+ synthetase 504 26.42 0 640031..641332 - 433 83319638 obgE MCAP_0532 - GTPase ObgE 505 20.39 0 641403..641711 - 102 83319379 - MCAP_0533 - hypothetical protein 506 17.80 -1 641701..642453 - 250 83319307 - MCAP_0534 - hypothetical protein 507 18.75 -1 642641..644245 - 534 83319971 - MCAP_0536 - hypothetical protein 508 25.30 0 644285..646138 - 617 83319875 - MCAP_0537 - ABC transporter, ATP-binding/permease protein, putative 509 23.93 0 646156..648027 - 623 83319922 - MCAP_0538 - ABC transporter, ATP-binding/permease protein, putative 510 25.49 0 648243..648548 - 101 83319652 - MCAP_0539 - single-strand binding protein family 511 17.92 -1 648710..649948 + 412 83319782 - MCAP_0540 - YeeE/YedE family protein, putative 512 21.37 0 649951..651747 + 598 83319939 - MCAP_0541 - hypothetical protein 513 23.24 0 651769..652392 - 207 83319843 - MCAP_0542 - ribonuclease HII, putative 514 23.97 0 652386..653336 - 316 83319346 - MCAP_0543 - GTPase family protein 515 26.97 0 653429..653821 - 130 83320044 rplS MCAP_0544 - 50S ribosomal protein L19 516 23.65 0 653823..654545 - 240 83319498 trmD MCAP_0545 - tRNA (guanine-N1)-methyltransferase 517 18.79 -1 654547..655041 - 164 83319392 - MCAP_0546 - 16S rRNA processing protein RimM, putative 518 25.69 0 655059..655385 - 108 83319787 rpsP MCAP_0547 - 30S ribosomal protein S16 519 18.59 -1 655474..655941 - 155 83319737 - MCAP_0548 - hypothetical protein 520 27.08 0 655947..657290 - 447 83319981 ffh MCAP_0549 - signal recognition particle protein 521 25.16 0 657320..658849 - 509 83319781 - MCAP_0550 - HDIG/HD/KH domain-containing protein 522 26.14 0 659001..659987 - 328 83319502 recA MCAP_0551 - recombinase A 523 20.77 0 660079..660627 - 182 83319299 - MCAP_0552 - hypothetical protein 524 21.79 0 661194..662042 + 282 83320059 - MCAP_0554 - hypothetical protein 525 25.30 0 663622..664455 + 277 83319814 - MCAP_0556 - C-5 cytosine-specific DNA methylase 526 29.90 +1 664567..665148 + 193 83319592 - MCAP_0557 - hypothetical protein 527 20.00 -1 665588..665737 + 49 83319482 - MCAP_0558 - hypothetical protein 528 23.39 0 666111..668111 + 666 83319401 - MCAP_0559 - TraG/TraD family membrane protein 529 24.22 0 668143..669558 + 471 83319529 - MCAP_0560 - hypothetical protein 530 24.70 0 669691..671172 + 493 83320007 - MCAP_0561 - putative lipoprotein 531 25.87 0 671184..671384 + 66 83319885 - MCAP_0562 - hypothetical protein 532 31.19 +1 671489..671815 + 108 83319411 - MCAP_0563 - hypothetical protein 533 26.64 0 671819..673462 + 547 83319294 - MCAP_0564 - hypothetical protein 534 23.15 0 673465..676302 + 945 83319829 - MCAP_0565 - hypothetical protein 535 22.44 0 676321..676944 + 207 83319718 - MCAP_0566 - hypothetical protein 536 23.02 0 676937..680959 + 1340 83319635 - MCAP_0567 - hypothetical protein 537 23.75 0 681011..681991 + 326 83319534 - MCAP_0568 - hypothetical protein 538 24.59 0 682175..682540 + 121 83320043 - MCAP_0569 - hypothetical protein 24.05 MEAN 4.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.