version 1.0
Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome - 1..1010023 812 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 383 19.09 -1 495977..496594 + 205 83319633 - MCAP_0403 - hypothetical protein 384 25.26 0 497250..498314 - 354 83319936 - MCAP_0409 - putative lipoprotein 385 20.20 0 498691..499581 + 296 83319469 - MCAP_0410 - hypothetical protein 386 25.62 0 499603..500004 + 133 83319657 - MCAP_0411 - hypothetical protein 387 28.38 +1 500149..500451 + 100 83319974 rplU MCAP_0412 - 50S ribosomal protein L21 388 22.22 0 500454..500768 + 104 83320038 - MCAP_0413 - hypothetical protein 389 31.21 +1 500770..501051 + 93 83319594 rpmA MCAP_0414 - 50S ribosomal protein L27 390 26.01 0 501245..502132 + 295 83319454 nanA MCAP_0415 - N-acetylneuraminate lyase 391 23.76 0 502136..503848 + 570 83319608 - MCAP_0416 - sodium/solute symporter family protein 392 20.00 -1 503857..504306 + 149 83319313 - MCAP_0417 - hypothetical protein 393 20.21 0 504299..505174 + 291 83319464 - MCAP_0418 - ROK family protein 394 26.58 0 505254..505934 + 226 83319759 - MCAP_0419 - N-acetylmannosamine-6-phosphate 2-epimerase 395 25.93 0 506088..507437 + 449 83319943 - MCAP_0420 - dipeptidase, putative 396 20.92 0 507518..507952 + 144 83319980 - MCAP_0421 - hypothetical protein 397 24.36 0 507977..508600 + 207 83319803 udk MCAP_0422 - uridine kinase 398 19.97 -1 508728..509954 + 408 83319646 - MCAP_0423 - ImpB/MucB/SamB family protein 399 19.20 -1 509967..511070 - 367 83319349 - MCAP_0424 - hypothetical protein 400 17.48 -1 511079..511999 - 306 83319410 - MCAP_0425 - hypothetical protein 401 18.63 -1 512075..512890 + 271 83319427 - MCAP_0426 - hypothetical protein 402 24.16 0 512935..514296 - 453 83319314 - MCAP_0427 - dihydrolipoamide dehydrogenase 403 18.00 -1 515351..515911 - 186 83319351 ruvA MCAP_0429 - Holliday junction DNA helicase ruvA, putative 404 29.09 +1 516022..516186 - 54 162316929 rpsU MCAP_0430 - 30S ribosomal protein S21 405 25.87 0 516454..517083 + 209 83319364 - MCAP_0431 - putative lipoprotein 406 25.28 0 517320..518039 + 239 83319990 - MCAP_0432 - putative lipoprotein 407 24.88 0 518278..518916 + 212 83319705 - MCAP_0433 - putative lipoprotein 408 19.38 -1 518964..520697 - 577 83319690 - MCAP_0434 - hypothetical protein 409 19.96 -1 520850..522502 + 550 83320040 - MCAP_0435 - hypothetical protein 410 14.83 -2 522507..523106 + 199 83319494 - MCAP_0436 - hypothetical protein 411 18.77 -1 523118..523927 - 269 83319776 - MCAP_0437 - hypothetical protein 412 22.37 0 524021..525178 + 385 83319687 nagA MCAP_0438 - N-acetylglucosamine-6-phosphate deacetylase 413 30.71 +1 525231..526184 + 317 83319961 ldh MCAP_0439 - L-lactate/malate dehydrogenase 414 22.47 0 526250..526912 - 220 83320009 - MCAP_0440 - hypothetical protein 415 25.87 0 527269..527469 - 66 83319348 - MCAP_0441 - hypothetical protein 416 24.38 0 527481..528965 - 494 83319272 - MCAP_0442 - putative lipoprotein 417 22.71 0 529220..529492 + 90 83319497 - MCAP_0443 - hypothetical protein 418 25.68 0 529607..530716 + 369 83319953 - MCAP_0444 - hypothetical protein 419 23.18 0 530742..531539 - 265 83320055 - MCAP_0445 - triacylglycerol lipase 420 24.71 0 531553..532341 - 262 83319797 - MCAP_0446 - triacylglycerol lipase, putative 421 23.19 0 532528..532872 + 114 83319901 - MCAP_0447 - glycine cleavage system H protein, putative 422 19.60 -1 532879..533730 + 283 83319543 - MCAP_0448 - hypothetical protein 423 25.14 0 533708..534745 + 345 83319826 - MCAP_0449 - lipoate-protein ligase 424 25.11 0 534745..535923 + 392 83319344 - MCAP_0450 - NADH:flavin oxidoreductase/NADH oxidase family protein 425 27.07 0 536187..538070 - 627 83319979 - MCAP_0451 - lipoprotein, putative (LppB) 426 18.91 -1 538184..538987 - 267 83319874 gtsC MCAP_0452 - glycerol ABC transporter, permease 427 18.51 -1 538965..539969 - 334 83319767 gtsB MCAP_0453 - glycerol ABC transporter, permease 428 19.64 -1 539962..541173 - 403 83319663 gtsA MCAP_0454 - glycerol ABC transporter, ATP-binding protein 429 19.99 -1 541179..543374 - 731 83319614 - MCAP_0455 - RecD/TraA family helicase 430 22.89 0 543485..546184 - 899 83319790 parC MCAP_0456 - DNA topoisomerase IV, A subunit 431 26.19 0 546186..548117 - 643 83319442 parE MCAP_0457 - DNA topoisomerase IV, B subunit 432 27.63 0 548347..549924 + 525 83319987 - MCAP_0458 - PTS system, mannitol-specific IIBC component 433 20.63 0 549927..550367 + 146 83319579 - MCAP_0459 - PTS system, mannitol-specific IIA component 434 27.11 0 550367..551266 + 299 83319446 - MCAP_0460 - 6-phosphogluconate dehydrogenase-like protein 435 27.47 0 551321..552736 - 471 83319779 - MCAP_0461 - aldehyde dehydrogenase (NAD) family protein 436 25.26 0 552903..553670 - 255 83319453 - MCAP_0462 - RNA methyltransferase 437 17.66 -1 553687..554190 - 167 83319664 - MCAP_0463 - hypothetical protein 438 24.83 0 554231..554677 - 148 83319773 - MCAP_0464 - hypothetical protein 439 25.55 0 554703..555986 - 427 83319876 pgi MCAP_0465 - glucose-6-phosphate isomerase 440 22.78 0 556207..558102 - 631 83319496 pepO MCAP_0466 - endopeptidase O 441 18.07 -1 558116..558685 - 189 83319768 - MCAP_0467 - 5-formyltetrahydrofolate cyclo-ligase 442 20.32 0 558678..559115 - 145 83320031 - MCAP_0468 - hypothetical protein 443 22.60 0 559119..560357 - 412 83319944 - MCAP_0469 - aminotransferase, class V 444 25.78 0 560551..563544 + 997 83319431 - MCAP_0470 - putative lipoprotein 445 24.63 0 563566..565737 + 723 83319261 - MCAP_0471 - putative lipoprotein 446 20.71 0 565740..566135 + 131 83319570 - MCAP_0472 - HIT family protein 447 22.53 0 566171..567151 - 326 83319859 - MCAP_0473 - hypothetical protein 448 20.85 0 567220..567876 - 218 83319985 ung MCAP_0474 - uracil-DNA glycosylase 449 23.55 0 567869..568798 - 309 83319703 pmi MCAP_0475 - phosphomannose isomerase type I 450 25.28 0 568919..570235 - 438 83319822 gid MCAP_0476 - tRNA (uracil-5-)-methyltransferase Gid 451 23.54 0 570228..570911 - 227 83319533 - MCAP_0477 - copper homeostasis protein CutC, putative 452 26.63 0 570902..572065 - 387 83319655 metK MCAP_0478 - S-adenosylmethionine synthetase 453 25.97 0 572276..573049 - 257 83319258 - MCAP_0479 - hypothetical protein 454 17.84 -1 573037..573378 - 113 83319384 p13 MCAP_0480 - UPF0122 protein, putative 455 24.24 0 573362..574636 - 424 83319748 ftsY MCAP_0481 - signal recognition particle-docking protein FtsY 456 23.81 0 574705..575376 - 223 83319786 - MCAP_0482 - phosphate transport system regulatory protein PhoU, putative 457 26.42 0 575385..576194 - 269 83319542 pstB MCAP_0483 - phosphate ABC transporter, ATP-binding protein 458 22.14 0 576187..578277 - 696 83319640 - MCAP_0484 - phosphate ABC transporter, permease, putative 459 21.78 0 578281..579492 - 403 83319693 - MCAP_0485 - phosphate ABC transporter, phosphate-binding protein, putative 460 18.16 -1 579583..580017 - 144 83319383 - MCAP_0486 - hypothetical protein 461 30.30 +1 580246..580443 - 65 83319933 rpmB MCAP_0488 - 50S ribosomal protein L28 462 26.36 0 580603..580932 + 109 83319555 - MCAP_0489 - hypothetical protein 463 26.40 0 580962..582605 + 547 83319282 - MCAP_0490 - dihydroxyacetone kinase 2 domain-containing protein 464 26.67 0 582637..583641 + 334 83319479 plsX MCAP_0491 - putative glycerol-3-phosphate acyltransferase PlsX 465 24.46 0 583631..584329 + 232 83319588 - MCAP_0492 - ribonuclease III 466 29.29 +1 584513..584908 + 131 83319679 - MCAP_0493 - hypothetical protein 467 23.26 0 584911..585297 + 128 83319800 - MCAP_0494 - hypothetical protein 468 25.21 0 585624..588590 + 988 83319729 - MCAP_0495 - structural maintenance of chromosomes (SMC) superfamily protein 469 24.33 0 588629..590893 - 754 83319815 - MCAP_0496 - RelA/SpoT family protein 470 25.54 0 590953..591465 - 170 83319437 apt MCAP_0497 - adenine phosphoribosyltransferase 471 21.30 0 591477..595691 - 1404 83319955 - MCAP_0498 - hypothetical protein 472 22.82 0 595793..597304 - 503 83319610 - MCAP_0499 - hypothetical protein 473 21.29 0 597343..598704 - 453 83319293 - MCAP_0500 - DEAD-box ATP dependent DNA helicase 474 17.50 -1 598713..599489 - 258 83319709 - MCAP_0501 - hypothetical protein 475 19.32 -1 599476..600153 - 225 83319817 - MCAP_0502 - hypothetical protein 476 26.68 0 600156..601673 - 505 83319868 rpoD MCAP_0503 - RNA polymerase sigma factor RpoD 477 20.44 0 601676..603490 - 604 83319946 dnaG MCAP_0504 - DNA primase 478 24.36 0 603527..604897 - 456 83319862 glyS MCAP_0505 - glycyl-tRNA synthetase 479 18.27 -1 604961..605710 - 249 83319326 - MCAP_0506 - DNA repair protein RecO 480 21.96 0 605710..606615 - 301 83319405 era MCAP_0507 - GTP-binding protein Era 481 20.81 0 606618..607112 - 164 83319995 - MCAP_0508 - hypothetical protein 482 15.19 -2 607118..609007 - 629 83319878 - MCAP_0509 - peptidase C39 family protein 24.05 MEAN 4.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.