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Methanosarcina mazei Go1, complete genome - 1..4096345 3370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1736 36.33 -1 2076810..2077943 + 377 21227838 - MM_1736 - transposase 1737 51.62 +1 2078638..2079687 + 349 21227839 nirJ MM_1737 - Heme biosynthesis protein 1738 45.01 0 2079699..2080229 + 176 21227840 nirD MM_1738 - Heme biosynthesis protein 1739 44.03 0 2080233..2080709 + 158 21227841 nirH MM_1739 - Heme biosynthesis protein 1740 46.73 0 2080921..2081592 + 223 21227842 - MM_1740 - siroheme synthase 1741 46.03 0 2081770..2083116 + 448 21227843 hemA MM_1741 - glutamyl-tRNA reductase 1742 49.13 +1 2083290..2084264 + 324 21227844 - MM_1742 - delta-aminolevulinic acid dehydratase 1743 49.10 +1 2084644..2085918 + 424 21227845 - MM_1743 - glutamate-1-semialdehyde aminotransferase 1744 51.95 +1 2085981..2086931 + 316 21227846 hemC MM_1744 - porphobilinogen deaminase 1745 51.88 +1 2086970..2087875 + 301 161485673 - MM_1745 - dihydroorotate dehydrogenase 1B 1746 48.33 0 2087875..2088654 + 259 21227848 - MM_1746 - dihydroorotate dehydrogenase electron transfer subunit 1747 46.80 0 2088732..2089466 + 244 21227849 - MM_1747 - fumarylacetoacetate hydrolase family protein 1748 45.75 0 2089466..2089771 + 101 21227850 - MM_1748 - hypothetical protein 1749 48.31 0 2090005..2091720 + 571 21227851 gltX MM_1749 - glutamyl-tRNA synthetase 1750 45.92 0 2091794..2092897 - 367 21227852 - MM_1750 - hypothetical protein 1751 48.46 0 2093339..2094700 + 453 21227853 - MM_1751 - replication factor A 1752 48.28 0 2094693..2095562 + 289 21227854 - MM_1752 - hypothetical protein 1753 48.18 0 2095657..2097279 + 540 21227855 - MM_1753 - D-3-phosphoglycerate dehydrogenase 1754 44.12 0 2097514..2098032 + 172 21227856 - MM_1754 - hypothetical protein 1755 46.72 0 2098200..2098580 + 126 21227857 - MM_1755 - 50S ribosomal protein L18e 1756 49.41 +1 2098591..2099013 + 140 161485672 rpl13p MM_1756 - 50S ribosomal protein L13P 1757 45.68 0 2099027..2099431 + 134 21227859 rps9p MM_1757 - 30S ribosomal protein S9P 1758 49.74 +1 2099440..2099628 + 62 21227860 - MM_1758 - DNA-directed RNA polymerase subunit N 1759 46.03 0 2099746..2099997 + 83 21227861 - MM_1759 - DNA-directed RNA polymerase subunit K 1760 47.85 0 2100135..2100809 + 224 21227862 rps2P MM_1760 - 30S ribosomal protein S2 1761 46.77 0 2100878..2101681 + 267 21227863 - MM_1761 - hypothetical protein 1762 46.91 0 2101873..2102778 + 301 21227864 - MM_1762 - mevalonate kinase 1763 49.43 +1 2102912..2103694 + 260 21227865 - MM_1763 - kinase 1764 50.18 +1 2103698..2104795 + 365 21227866 - MM_1764 - isopentenyl pyrophosphate isomerase 1765 21.65 -2 2105598..2105828 + 76 21227867 - MM_1765 - hypothetical protein 1766 49.78 +1 2106303..2107646 + 447 21227868 - MM_1766 - Zn-dependent hydrolase 1767 48.41 0 2107673..2108647 + 324 21227869 - MM_1767 - dimethylallyltransferase 1768 38.99 0 2109332..2110126 - 264 21227870 - MM_1768 - hypothetical protein 1769 36.13 -1 2110825..2111289 + 154 21227871 - MM_1769 - transposase 1770 47.98 0 2111826..2114480 - 884 21227872 - MM_1770 - pyruvate phosphate dikinase 1771 43.33 0 2115291..2115560 + 89 21227873 - MM_1771 - H/ACA RNA-protein complex component Gar1 1772 50.00 +1 2115751..2116764 + 337 21227874 tfb MM_1772 - transcription initiation factor IIB 1773 47.40 0 2117165..2117818 + 217 21227875 - MM_1773 - hypothetical protein 1774 43.09 0 2117844..2118089 - 81 21227876 - MM_1774 - hypothetical protein 1775 45.20 0 2118302..2119312 + 336 21227877 - MM_1775 - methyltransferase 1776 41.51 0 2119785..2120249 - 154 21227878 - MM_1776 - Thiol-specific antioxidant protein 1777 40.35 0 2120683..2122620 + 645 21227879 - MM_1777 - sensory transduction histidine kinase 1778 46.19 0 2122691..2123662 - 323 21227880 czcD MM_1778 - cobalt-zinc-cadmium resistance protein 1779 48.90 +1 2123942..2124622 - 226 21227881 - MM_1779 - hypothetical protein 1780 46.40 0 2124654..2125319 - 221 21227882 - MM_1780 - hypothetical protein 1781 42.04 0 2126112..2128052 + 646 21227883 - MM_1781 - sensory transduction histidine kinase 1782 46.04 0 2128309..2129733 + 474 21227884 - MM_1782 - Sodium/glutamate symport carrier protein 1783 44.62 0 2130124..2130309 - 61 21227885 - MM_1783 - hypothetical protein 1784 45.23 0 2131138..2132700 + 520 21227886 - MM_1784 - hypothetical protein 1785 48.66 +1 2132766..2133959 + 397 21227887 - MM_1785 - hypothetical protein 1786 40.70 0 2134345..2134629 + 94 21227888 - MM_1786 - transposase 1787 36.60 -1 2134645..2135778 + 377 21227889 - MM_1787 - transposase 1788 44.87 0 2135879..2136736 + 285 21227890 - MM_1788 - HTH DNA-binding protein 1789 44.12 0 2136998..2137915 - 305 21227891 - MM_1789 - hypothetical protein 1790 41.40 0 2138403..2139245 + 280 21227892 - MM_1790 - hypothetical protein 1791 42.81 0 2139329..2139940 + 203 21227893 - MM_1791 - hypothetical protein 1792 56.37 +2 2140063..2140266 - 67 21227894 - MM_1792 - hypothetical protein 1793 44.12 0 2140854..2141261 + 135 21227895 - MM_1793 - hypothetical protein 1794 47.69 0 2141417..2143972 + 851 21227896 - MM_1794 - hypothetical protein 1795 49.39 +1 2144051..2145190 - 379 21227897 - MM_1795 - Iron-sulfur cluster-binding protein 1796 43.38 0 2145308..2145715 - 135 21227898 - MM_1796 - hypothetical protein 1797 39.43 0 2145972..2146250 + 92 21227899 groES MM_1797 - co-chaperonin GroES 1798 48.36 0 2146398..2148008 + 536 21227900 groEL MM_1798 - chaperonin GroEL 1799 44.32 0 2148274..2149101 + 275 21227901 - MM_1799 - hypothetical protein 1800 44.20 0 2149409..2150098 + 229 21227902 - MM_1800 - transporter 1801 42.06 0 2150204..2150845 + 213 21227903 - MM_1801 - hypothetical protein 1802 49.96 +1 2151057..2152241 + 394 21227904 - MM_1802 - aspartate aminotransferase 1803 45.58 0 2152397..2153221 - 274 21227905 - MM_1803 - hypothetical protein 1804 45.90 0 2153891..2154415 - 174 21227906 - MM_1804 - rubrerythrin 1805 47.29 0 2154932..2156335 - 467 21227907 - MM_1805 - hypothetical protein 1806 46.17 0 2156439..2157209 - 256 21227908 - MM_1806 - hypothetical protein 1807 47.92 0 2157380..2158195 - 271 21227909 - MM_1807 - translation initiation factor IF-2 subunit alpha 1808 47.62 0 2158259..2158447 - 62 21227910 rps27e MM_1808 - 30S ribosomal protein S27e 1809 49.82 +1 2158454..2158732 - 92 21227911 rpl44e MM_1809 - 50S ribosomal protein L44e 1810 43.66 0 2159120..2159845 - 241 21227912 - MM_1810 - hypothetical protein 1811 44.10 0 2159811..2161055 - 414 21227913 - MM_1811 - DNA primase small subunit 1812 46.26 0 2161400..2162227 + 275 21227914 - MM_1812 - hypothetical protein 1813 49.18 +1 2162571..2163794 + 407 21227915 - MM_1813 - hypothetical protein 1814 45.93 0 2163879..2164910 + 343 21227916 - MM_1814 - hypothetical protein 1815 48.81 +1 2164907..2165959 + 350 21227917 - MM_1815 - cell division protein 1816 44.76 0 2166356..2167633 + 425 21227918 - MM_1816 - hypothetical protein 1817 47.22 0 2168258..2168977 - 239 21227919 - MM_1817 - hypothetical protein 1818 46.00 0 2169138..2170013 - 291 21227920 - MM_1818 - hypothetical protein 1819 32.49 -2 2170157..2171461 + 434 21227921 - MM_1819 - transposase 1820 41.04 0 2172057..2172614 + 185 21227922 - MM_1820 - tRNA nucleotidyltransferase 1821 46.31 0 2172935..2173951 + 338 21227923 rfc MM_1821 - replication factor C small subunit 1822 21.35 -2 2173948..2174139 + 63 21227924 - MM_1822 - hypothetical protein 1823 46.20 0 2174204..2174716 + 170 21227925 - MM_1823 - putative small multi-drug export protein 1824 45.42 0 2174919..2175191 + 90 21227926 - MM_1824 - ferredoxin 1825 46.01 0 2175267..2175479 - 70 21227927 hmf1 MM_1825 - DNA binding protein 1826 44.72 0 2175835..2176800 + 321 21227928 - MM_1826 - methyltransferase 1827 49.30 +1 2177306..2179027 + 573 21227929 - MM_1827 - pyruvate carboxylase subunit B 1828 48.72 +1 2179050..2180531 + 493 161485671 - MM_1828 - pyruvate carboxylase subunit A 1829 47.14 0 2180649..2181626 + 325 21227931 - MM_1829 - biotin operon repressor 1830 42.49 0 2181652..2182230 + 192 21227932 - MM_1830 - hypothetical protein 1831 40.00 0 2182865..2183149 + 94 21227933 - MM_1831 - transposase 1832 36.95 -1 2183165..2184298 + 377 21227934 - MM_1832 - transposase 1833 41.85 0 2184313..2185275 - 320 21227935 - MM_1833 - phosphoserine phosphatase 1834 42.15 0 2185306..2185929 - 207 21227936 - MM_1834 - hypothetical protein 1835 42.96 0 2186060..2186350 - 96 21227937 - MM_1835 - hypothetical protein 43.57 MEAN 4.98 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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