IslandPath Analysis: Methanococcoides burtonii DSM 6242



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 41.89   STD DEV: 4.51
Methanococcoides burtonii DSM 6242, complete genome - 1..2575032
2273 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
672	 45.37	0	761225..762088	+	287	91772754	-	Mbur_0731	-	putative phosphoesterase
673	 47.65	+1	762085..764919	+	944	91772755	-	Mbur_0732	-	DEAD/DEAH box helicase-like protein
674	 44.67	0	764973..766727	+	584	91772756	-	Mbur_0733	-	adenine deaminase
675	 42.08	0	766871..768094	-	407	91772757	-	Mbur_0734	-	glucoamylase and related glycosyl hydrolases
676	 43.50	0	768100..768630	-	176	91772758	-	Mbur_0735	-	hypothetical protein
677	 42.25	0	768661..769479	-	272	91772759	-	Mbur_0736	-	mannosyl-3-phosphoglycerate phosphatase
678	 42.06	0	769717..770931	+	404	91772760	-	Mbur_0737	-	hypothetical protein
679	 35.17	-1	771291..772214	+	307	91772761	-	Mbur_0738	-	transposase, IS4
680	 31.28	-2	774889..775278	+	129	91772762	-	Mbur_0741	-	hypothetical protein
681	 35.06	-1	775372..775833	+	153	91772763	-	Mbur_0742	-	hypothetical protein
682	 37.11	-1	776842..778323	+	493	91772764	-	Mbur_0744	-	transposase
683	 39.16	0	778603..778911	+	102	91772765	-	Mbur_0745	-	hypothetical protein
684	 37.16	-1	779844..780470	-	208	91772766	-	Mbur_0747	-	hypothetical protein
685	 42.09	0	781083..781733	-	216	91772767	-	Mbur_0748	-	phosphate uptake regulator, PhoU
686	 41.93	0	781738..782505	-	255	91772768	-	Mbur_0749	-	ABC phosphate transporter, ATPase subunit
687	 46.81	+1	782528..783388	-	286	91772769	-	Mbur_0750	-	ABC phosphate transporter, inner membrane subunit
688	 43.62	0	783385..784278	-	297	91772770	-	Mbur_0751	-	phosphate ABC transporter inner membrane protein
689	 46.97	+1	784314..785171	-	285	91772771	-	Mbur_0752	-	phosphate ABC transporter phosphate-binding protein
690	 32.44	-2	785851..787635	+	594	91772772	-	Mbur_0753	-	ATP-dependent OLD family endonuclease
691	 33.16	-1	787638..789401	+	587	91772773	-	Mbur_0754	-	ATP-dependent DNA helicase Rep
692	 43.46	0	789591..790163	-	190	91772774	-	Mbur_0755	-	GPR1/FUN34/yaaH
693	 37.58	0	790334..791275	+	313	91772775	-	Mbur_0756	-	transposase, IS4
694	 45.98	0	791534..792901	+	455	91772776	-	Mbur_0757	-	dihydroorotase
695	 39.62	0	792972..793877	+	301	91772777	-	Mbur_0758	-	KaiC
696	 38.82	0	793854..794546	-	230	91772778	-	Mbur_0759	-	hypothetical protein
697	 46.09	0	795577..796893	-	438	91772779	-	Mbur_0760	-	phenylacetate-CoA ligase
698	 47.33	+1	796928..797527	-	199	91772780	-	Mbur_0761	-	indolepyruvate oxidoreductase subunit B
699	 45.36	0	797524..799410	-	628	91772781	-	Mbur_0762	-	thiamine pyrophosphate enzyme-like TPP-binding
700	 32.49	-2	799623..799979	+	118	91772782	-	Mbur_0763	-	hypothetical protein
701	 34.60	-1	801921..803651	+	576	91772783	-	Mbur_0765	-	RNA-directed DNA polymerase
702	 40.11	0	804197..805687	+	496	91772784	-	Mbur_0767	-	hypothetical protein
703	 34.90	-1	805881..807032	+	383	91772785	-	Mbur_0768	-	signal transduction histidine kinase
704	 39.77	0	807266..807871	+	201	91772786	-	Mbur_0769	-	hypothetical protein
705	 46.85	+1	810209..811540	+	443	91772787	aspC	Mbur_0772	-	aspartyl-tRNA synthetase
706	 45.11	0	811586..812281	+	231	91772788	-	Mbur_0773	-	ribose-5-phosphate isomerase
707	 39.15	0	813380..813568	-	62	91772789	-	Mbur_0775	-	hypothetical protein
708	 45.93	0	814035..814526	-	163	91772790	-	Mbur_0776	-	iron dependent repressor
709	 50.20	+1	814749..814997	+	82	91772791	-	Mbur_0777	-	hypothetical protein
710	 52.63	+2	815004..815231	+	75	91772792	-	Mbur_0778	-	hypothetical protein
711	 49.40	+1	815235..817301	+	688	91772793	-	Mbur_0779	-	ferrous iron transport protein B
712	 49.43	+1	817323..817763	+	146	91772794	-	Mbur_0780	-	hypothetical protein
713	 48.95	+1	817773..818105	+	110	91772795	-	Mbur_0781	-	hypothetical protein
714	 46.78	+1	818102..818443	+	113	91772796	-	Mbur_0782	-	hypothetical protein
715	 46.58	+1	818424..818642	+	72	91772797	-	Mbur_0783	-	iron dependent repressor
716	 37.93	0	818862..820124	-	420	91772798	-	Mbur_0784	-	hypothetical protein
717	 37.79	0	820522..821463	+	313	91772799	-	Mbur_0785	-	transposase, IS4
718	 42.09	0	821708..822358	-	216	91772800	-	Mbur_0786	-	CDP-alcohol phosphatidyltransferase
719	 42.74	0	822358..823473	-	371	91772801	-	Mbur_0787	-	L-threonine O-3-phosphate decarboxylase
720	 41.07	0	823706..824455	-	249	91772802	-	Mbur_0788	-	nucleotidyl transferase
721	 38.81	0	824588..825025	-	145	91772803	-	Mbur_0789	-	hypothetical protein
722	 45.66	0	825514..826746	-	410	91772804	-	Mbur_0790	-	TrkA-C
723	 44.21	0	826859..827419	-	186	91772805	-	Mbur_0791	-	MgtE, divalent cation transporter
724	 43.00	0	827416..828036	-	206	91772806	-	Mbur_0792	-	MgtE integral membrane region
725	 27.62	-2	828292..829377	+	361	91772807	-	Mbur_0793	-	hypothetical protein
726	 31.82	-2	829449..829712	+	87	91772808	-	Mbur_0794	-	hypothetical protein
727	 34.04	-1	830087..831211	-	374	91772809	-	Mbur_0795	-	transposase
728	 46.16	0	831689..833068	+	459	91772810	-	Mbur_0796	-	Sep-tRNA:Cys-tRNA synthetase
729	 48.23	+1	833079..834374	+	431	91772811	-	Mbur_0797	-	O-acetylhomoserine/O-acetylserine sulfhydrylase
730	 47.24	+1	834377..835843	+	488	91772812	-	Mbur_0798	-	homoserine O-acetyltransferase
731	 47.09	+1	835939..838344	-	801	91772813	-	Mbur_0799	-	phosphoenolpyruvate synthase
732	 41.53	0	838715..839836	+	373	91772814	-	Mbur_0800	-	transposase
733	 44.51	0	839951..842392	-	813	91772815	-	Mbur_0801	-	hypothetical protein
734	 44.12	0	842389..844260	-	623	91772816	-	Mbur_0802	-	hypothetical protein
735	 44.33	0	844260..845141	-	293	91772817	-	Mbur_0803	-	hypothetical protein
736	 44.51	0	845202..846176	-	324	91772818	-	Mbur_0804	-	ATPase
737	 42.36	0	846333..847229	-	298	91772819	-	Mbur_0805	-	hypothetical protein
738	 41.17	0	847289..848143	-	284	91772820	-	Mbur_0806	-	prephenate dehydratase
739	 40.00	0	848191..849645	-	484	91772821	-	Mbur_0807	-	metalloenzyme
740	 44.15	0	850243..851259	+	338	91772822	-	Mbur_0808	-	methylcobalamin:coenzyme M methyltransferase
741	 42.66	0	851406..853013	+	535	91772823	-	Mbur_0809	-	4Fe-4S ferredoxin, iron-sulfur binding
742	 39.45	0	853340..856690	+	1116	91772824	-	Mbur_0810	-	multi-PAS sensor
743	 44.44	0	856811..857575	+	254	91772825	-	Mbur_0811	-	methanol corrinoid protein
744	 44.42	0	857582..858970	+	462	91772826	-	Mbur_0812	-	methanol:corrinoid methyltransferase
745	 45.53	0	859768..860538	+	256	91772827	-	Mbur_0813	-	methanol corrinoid protein
746	 46.90	+1	860552..861937	+	461	91772828	-	Mbur_0814	-	methanol:corrinoid methyltransferase
747	 44.17	0	862257..862874	+	205	91772829	-	Mbur_0815	-	GPR1/FUN34/YaaH family protein
748	 42.36	0	863872..865788	+	638	91772830	-	Mbur_0817	-	hydantoinase/oxoprolinase
749	 39.27	0	865934..867079	+	381	91772831	-	Mbur_0818	-	cobalamin synthesis protein, P47K
750	 39.29	0	867327..867494	-	55	91772832	-	Mbur_0819	-	hypothetical protein
751	 40.19	0	867618..869177	-	519	91772833	-	Mbur_0820	-	multisensor signal transduction histidine kinase
752	 37.05	-1	869982..870680	-	232	91772834	-	Mbur_0822	-	signal transduction ATPase
753	 36.26	-1	870743..871870	-	375	91772835	-	Mbur_0823	-	hypothetical protein
754	 35.73	-1	871883..872884	-	333	91772836	-	Mbur_0824	-	hypothetical protein
755	 35.61	-1	872909..873523	-	204	91772837	-	Mbur_0825	-	response regulator receiver
756	 37.19	-1	873664..874803	-	379	91772838	-	Mbur_0826	-	major facilitator transporter
757	 40.04	0	875365..875886	+	173	91772839	aroK	Mbur_0827	-	shikimate kinase
758	 44.42	0	875908..877269	-	453	91772840	-	Mbur_0828	-	hypothetical protein
759	 41.94	0	877284..877562	-	92	91772841	-	Mbur_0829	-	hypothetical protein
760	 41.49	0	877759..878175	-	138	91772842	-	Mbur_0830	-	hypothetical protein
761	 40.42	0	878312..879256	-	314	91772843	-	Mbur_0831	-	K+-dependent Na+/Ca+ exchanger related-protein
762	 37.28	-1	879287..879742	-	151	91772844	-	Mbur_0832	-	hypothetical protein
763	 40.00	0	879815..880339	-	174	91772845	-	Mbur_0833	-	hypothetical protein
764	 37.28	-1	880438..880842	-	134	91772846	-	Mbur_0834	-	response regulator receiver
765	 41.94	0	880962..881507	-	181	91772847	-	Mbur_0835	-	neelarodoxin
766	 42.97	0	881522..881770	-	82	91772848	-	Mbur_0836	-	hypothetical protein
767	 39.26	0	881784..882053	-	89	91772849	-	Mbur_0837	-	monomethylamine transporter
768	 44.86	0	882069..883439	-	456	91772850	-	Mbur_0838	-	amino acid transporter
769	 45.57	0	885086..885739	-	217	91772851	-	Mbur_0840	-	monomethylamine corrinoid protein
770	 38.73	0	886090..886497	-	135	91772852	-	Mbur_0841	-	response regulator receiver
771	 39.70	0	886510..888693	-	727	91772853	-	Mbur_0842	-	multisensor signal transduction histidine kinase
41.89	MEAN

4.51	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.