IslandPath Analysis: Methanococcoides burtonii DSM 6242



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 41.89   STD DEV: 4.51
Methanococcoides burtonii DSM 6242, complete genome - 1..2575032
2273 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
636	 43.47	0	717487..717999	-	170	91772718	-	Mbur_0695	-	response regulator receiver
637	 42.55	0	718149..718430	+	93	91772719	-	Mbur_0696	-	hypothetical protein
638	 38.89	0	718494..719249	-	251	91772720	-	Mbur_0697	-	hypothetical protein
639	 36.89	-1	719309..719533	-	74	91772721	-	Mbur_0698	-	hypothetical protein
640	 44.03	0	719570..720784	-	404	91772722	-	Mbur_0699	-	hypothetical protein
641	 41.02	0	720820..722055	-	411	91772723	-	Mbur_0700	-	hypothetical protein
642	 42.84	0	722065..722790	-	241	91772724	-	Mbur_0701	-	ABC transporter, ATPase subunit
643	 33.81	-1	722964..724226	+	420	91772725	-	Mbur_0702	-	proteinase inhibitor I4, serpin
644	 47.29	+1	724470..725759	-	429	91772726	-	Mbur_0703	-	thiamine biosynthesis protein ThiC
645	 44.30	0	725973..726419	+	148	91772727	-	Mbur_0704	-	hypothetical protein
646	 46.65	+1	726570..728912	+	780	91772728	-	Mbur_0705	-	DNA topoisomerase
647	 30.20	-2	729028..729666	-	212	91772729	-	Mbur_0706	-	hypothetical protein
648	 42.32	0	730370..730903	-	177	91772730	-	Mbur_0707	-	nitroreductase
649	 49.11	+1	730975..731982	-	335	91772731	-	Mbur_0708	-	ketol-acid reductoisomerase
650	 44.65	0	732026..732511	-	161	91772732	ilvH	Mbur_0709	-	acetolactate synthase 3 regulatory subunit
651	 46.34	0	732508..734199	-	563	91772733	-	Mbur_0710	-	acetolactate synthase 3 catalytic subunit
652	 47.05	+1	734346..735803	-	485	91772734	-	Mbur_0711	-	(R)-citramalate synthase
653	 47.10	+1	736342..737394	-	350	91772735	-	Mbur_0712	-	cellulase
654	 28.86	-2	737510..738046	-	178	91772736	-	Mbur_0713	-	hypothetical protein
655	 42.26	0	738138..738641	-	167	91772737	-	Mbur_0714	-	hypothetical protein
656	 39.87	0	738836..741160	-	774	91772738	-	Mbur_0715	-	hypothetical protein
657	 42.05	0	741799..742590	+	263	91772739	-	Mbur_0716	-	protease HtpX-like protein
658	 42.45	0	742834..743667	-	277	91772740	-	Mbur_0717	-	hypothetical protein
659	 42.07	0	743949..744749	+	266	91772741	-	Mbur_0718	-	hypothetical protein
660	 42.42	0	744765..745766	+	333	91772742	-	Mbur_0719	-	hypothetical protein
661	 33.91	-1	745810..746844	+	344	91772743	-	Mbur_0720	-	hypothetical protein
662	 32.89	-1	746891..747340	+	149	91772744	-	Mbur_0721	-	galactoside-O-acetyltransferase
663	 34.01	-1	747446..748330	+	294	91772745	-	Mbur_0722	-	glycosyl transferase family protein
664	 30.89	-2	748308..749861	+	517	91772746	-	Mbur_0723	-	hypothetical protein
665	 27.42	-2	749867..750982	+	371	91772747	-	Mbur_0724	-	glycosyl transferase, group 1
666	 27.78	-2	751010..752143	+	377	91772748	-	Mbur_0725	-	glycosyl transferase, group 1
667	 30.21	-2	752288..753409	+	373	91772749	-	Mbur_0726	-	glycosyl transferase, group 1
668	 29.99	-2	753424..754860	+	478	91772750	-	Mbur_0727	-	polysaccharide biosynthesis protein
669	 38.12	0	755888..759268	+	1126	91772751	-	Mbur_0728	-	putative Ig
670	 41.12	0	759597..760277	+	226	91772752	-	Mbur_0729	-	cellulosome anchoring protein
671	 44.36	0	760824..761222	+	132	91772753	-	Mbur_0730	-	hypothetical protein
672	 45.37	0	761225..762088	+	287	91772754	-	Mbur_0731	-	putative phosphoesterase
673	 47.65	+1	762085..764919	+	944	91772755	-	Mbur_0732	-	DEAD/DEAH box helicase-like protein
674	 44.67	0	764973..766727	+	584	91772756	-	Mbur_0733	-	adenine deaminase
675	 42.08	0	766871..768094	-	407	91772757	-	Mbur_0734	-	glucoamylase and related glycosyl hydrolases
676	 43.50	0	768100..768630	-	176	91772758	-	Mbur_0735	-	hypothetical protein
677	 42.25	0	768661..769479	-	272	91772759	-	Mbur_0736	-	mannosyl-3-phosphoglycerate phosphatase
678	 42.06	0	769717..770931	+	404	91772760	-	Mbur_0737	-	hypothetical protein
679	 35.17	-1	771291..772214	+	307	91772761	-	Mbur_0738	-	transposase, IS4
680	 31.28	-2	774889..775278	+	129	91772762	-	Mbur_0741	-	hypothetical protein
681	 35.06	-1	775372..775833	+	153	91772763	-	Mbur_0742	-	hypothetical protein
682	 37.11	-1	776842..778323	+	493	91772764	-	Mbur_0744	-	transposase
683	 39.16	0	778603..778911	+	102	91772765	-	Mbur_0745	-	hypothetical protein
684	 37.16	-1	779844..780470	-	208	91772766	-	Mbur_0747	-	hypothetical protein
685	 42.09	0	781083..781733	-	216	91772767	-	Mbur_0748	-	phosphate uptake regulator, PhoU
686	 41.93	0	781738..782505	-	255	91772768	-	Mbur_0749	-	ABC phosphate transporter, ATPase subunit
687	 46.81	+1	782528..783388	-	286	91772769	-	Mbur_0750	-	ABC phosphate transporter, inner membrane subunit
688	 43.62	0	783385..784278	-	297	91772770	-	Mbur_0751	-	phosphate ABC transporter inner membrane protein
689	 46.97	+1	784314..785171	-	285	91772771	-	Mbur_0752	-	phosphate ABC transporter phosphate-binding protein
690	 32.44	-2	785851..787635	+	594	91772772	-	Mbur_0753	-	ATP-dependent OLD family endonuclease
691	 33.16	-1	787638..789401	+	587	91772773	-	Mbur_0754	-	ATP-dependent DNA helicase Rep
692	 43.46	0	789591..790163	-	190	91772774	-	Mbur_0755	-	GPR1/FUN34/yaaH
693	 37.58	0	790334..791275	+	313	91772775	-	Mbur_0756	-	transposase, IS4
694	 45.98	0	791534..792901	+	455	91772776	-	Mbur_0757	-	dihydroorotase
695	 39.62	0	792972..793877	+	301	91772777	-	Mbur_0758	-	KaiC
696	 38.82	0	793854..794546	-	230	91772778	-	Mbur_0759	-	hypothetical protein
697	 46.09	0	795577..796893	-	438	91772779	-	Mbur_0760	-	phenylacetate-CoA ligase
698	 47.33	+1	796928..797527	-	199	91772780	-	Mbur_0761	-	indolepyruvate oxidoreductase subunit B
699	 45.36	0	797524..799410	-	628	91772781	-	Mbur_0762	-	thiamine pyrophosphate enzyme-like TPP-binding
700	 32.49	-2	799623..799979	+	118	91772782	-	Mbur_0763	-	hypothetical protein
701	 34.60	-1	801921..803651	+	576	91772783	-	Mbur_0765	-	RNA-directed DNA polymerase
702	 40.11	0	804197..805687	+	496	91772784	-	Mbur_0767	-	hypothetical protein
703	 34.90	-1	805881..807032	+	383	91772785	-	Mbur_0768	-	signal transduction histidine kinase
704	 39.77	0	807266..807871	+	201	91772786	-	Mbur_0769	-	hypothetical protein
705	 46.85	+1	810209..811540	+	443	91772787	aspC	Mbur_0772	-	aspartyl-tRNA synthetase
706	 45.11	0	811586..812281	+	231	91772788	-	Mbur_0773	-	ribose-5-phosphate isomerase
707	 39.15	0	813380..813568	-	62	91772789	-	Mbur_0775	-	hypothetical protein
708	 45.93	0	814035..814526	-	163	91772790	-	Mbur_0776	-	iron dependent repressor
709	 50.20	+1	814749..814997	+	82	91772791	-	Mbur_0777	-	hypothetical protein
710	 52.63	+2	815004..815231	+	75	91772792	-	Mbur_0778	-	hypothetical protein
711	 49.40	+1	815235..817301	+	688	91772793	-	Mbur_0779	-	ferrous iron transport protein B
712	 49.43	+1	817323..817763	+	146	91772794	-	Mbur_0780	-	hypothetical protein
713	 48.95	+1	817773..818105	+	110	91772795	-	Mbur_0781	-	hypothetical protein
714	 46.78	+1	818102..818443	+	113	91772796	-	Mbur_0782	-	hypothetical protein
715	 46.58	+1	818424..818642	+	72	91772797	-	Mbur_0783	-	iron dependent repressor
716	 37.93	0	818862..820124	-	420	91772798	-	Mbur_0784	-	hypothetical protein
717	 37.79	0	820522..821463	+	313	91772799	-	Mbur_0785	-	transposase, IS4
718	 42.09	0	821708..822358	-	216	91772800	-	Mbur_0786	-	CDP-alcohol phosphatidyltransferase
719	 42.74	0	822358..823473	-	371	91772801	-	Mbur_0787	-	L-threonine O-3-phosphate decarboxylase
720	 41.07	0	823706..824455	-	249	91772802	-	Mbur_0788	-	nucleotidyl transferase
721	 38.81	0	824588..825025	-	145	91772803	-	Mbur_0789	-	hypothetical protein
722	 45.66	0	825514..826746	-	410	91772804	-	Mbur_0790	-	TrkA-C
723	 44.21	0	826859..827419	-	186	91772805	-	Mbur_0791	-	MgtE, divalent cation transporter
724	 43.00	0	827416..828036	-	206	91772806	-	Mbur_0792	-	MgtE integral membrane region
725	 27.62	-2	828292..829377	+	361	91772807	-	Mbur_0793	-	hypothetical protein
726	 31.82	-2	829449..829712	+	87	91772808	-	Mbur_0794	-	hypothetical protein
727	 34.04	-1	830087..831211	-	374	91772809	-	Mbur_0795	-	transposase
728	 46.16	0	831689..833068	+	459	91772810	-	Mbur_0796	-	Sep-tRNA:Cys-tRNA synthetase
729	 48.23	+1	833079..834374	+	431	91772811	-	Mbur_0797	-	O-acetylhomoserine/O-acetylserine sulfhydrylase
730	 47.24	+1	834377..835843	+	488	91772812	-	Mbur_0798	-	homoserine O-acetyltransferase
731	 47.09	+1	835939..838344	-	801	91772813	-	Mbur_0799	-	phosphoenolpyruvate synthase
732	 41.53	0	838715..839836	+	373	91772814	-	Mbur_0800	-	transposase
733	 44.51	0	839951..842392	-	813	91772815	-	Mbur_0801	-	hypothetical protein
734	 44.12	0	842389..844260	-	623	91772816	-	Mbur_0802	-	hypothetical protein
735	 44.33	0	844260..845141	-	293	91772817	-	Mbur_0803	-	hypothetical protein
41.89	MEAN

4.51	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.