IslandPathversion 1.0

IslandPath Analysis: Methanococcoides burtonii DSM 6242



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 41.89 STD DEV: 4.51
Methanococcoides burtonii DSM 6242, complete genome - 1..2575032
2273 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
559	 47.61	+1	628292..631120	-	942	91772641	-	Mbur_0612	-	copper-translocating P-type ATPase
560	 42.16	0	631206..631409	-	67	91772642	-	Mbur_0613	-	heavy metal transport/detoxification protein
561	 44.19	0	631644..632564	+	306	91772643	-	Mbur_0614	-	quinolinate synthetase
562	 43.07	0	632604..633476	-	290	91772644	-	Mbur_0615	-	cobyrinic acid a,c-diamide synthase
563	 46.25	0	633512..633844	-	110	91772645	-	Mbur_0616	-	hypothetical protein
564	 44.80	0	633863..634717	-	284	91772646	-	Mbur_0617	-	cobyrinic acid a,c-diamide synthase
565	 43.12	0	634746..635981	-	411	91772647	-	Mbur_0618	-	cation diffusion facilitator family transporter
566	 45.89	0	636045..637964	-	639	91772648	-	Mbur_0619	-	nitrite and sulphite reductase
567	 47.31	+1	638000..638371	-	123	91772649	-	Mbur_0620	-	dinitrogenase iron-molybdenum cofactor biosynthesis
568	 52.16	+2	638395..638856	-	153	91772650	-	Mbur_0621	-	dinitrogenase iron-molybdenum cofactor biosynthesis
569	 43.59	0	639035..639736	+	233	91772651	-	Mbur_0622	-	hypothetical protein
570	 41.67	0	640046..640453	-	135	91772652	-	Mbur_0623	-	JAMM-like protein. metallo peptidase. MEROPS family M67B
571	 33.33	-1	640468..640872	-	134	91772653	-	Mbur_0624	-	hypothetical protein
572	 29.77	-2	640994..642142	+	382	91772654	-	Mbur_0625	-	transposase
573	 40.98	0	642242..643654	-	470	91772655	-	Mbur_0626	-	hypothetical protein
574	 39.97	0	643708..644445	-	245	91772656	-	Mbur_0627	-	silent information regulator protein Sir2
575	 41.81	0	644640..645902	+	420	91772657	-	Mbur_0628	-	diaminopimelate decarboxylase
576	 39.21	0	646027..649176	-	1049	91772658	-	Mbur_0629	-	TPR repeat-containing protein
577	 41.08	0	649391..649687	-	98	91772659	-	Mbur_0630	-	alkylhydroperoxidase-like protein
578	 34.40	-1	649907..650188	-	93	91772660	-	Mbur_0631	-	hypothetical protein
579	 33.08	-1	650185..650961	-	258	91772661	-	Mbur_0632	-	hypothetical protein
580	 43.21	0	651053..651811	+	252	91772662	-	Mbur_0633	-	ABC transporter, ATPase subunit
581	 38.89	0	651808..653067	+	419	91772663	-	Mbur_0634	-	hypothetical protein
582	 41.06	0	653094..654401	+	435	91772664	-	Mbur_0635	-	ABC transporter, inner membrane subunit
583	 42.27	0	654830..655243	-	137	91772665	-	Mbur_0636	-	hypothetical protein
584	 35.91	-1	655433..656557	-	374	91772666	-	Mbur_0637	-	transposase, mutator type
585	 34.04	-1	657369..658493	-	374	91772667	-	Mbur_0638	-	transposase
586	 38.58	0	658646..660016	+	456	91772668	-	Mbur_0639	-	PAS/PAC sensor signal transduction histidine kinase
587	 34.65	-1	660244..660546	+	100	91772669	-	Mbur_0640	-	hypothetical protein
588	 30.62	-2	660553..660810	+	85	91772670	-	Mbur_0641	-	hypothetical protein
589	 28.75	-2	660917..661156	+	79	91772671	-	Mbur_0642	-	hypothetical protein
590	 43.15	0	661620..662006	-	128	91772672	-	Mbur_0643	-	hypothetical protein
591	 36.88	-1	662069..662689	-	206	91772673	-	Mbur_0644	-	hypothetical protein
592	 39.28	0	663044..663514	-	156	91772674	-	Mbur_0645	-	hypothetical protein
593	 38.42	0	664034..665095	-	353	91772675	-	Mbur_0646	-	magnesium and cobalt transport protein CorA
594	 33.66	-1	665451..666371	+	306	91772676	-	Mbur_0647	-	MscS mechanosensitive ion channel
595	 37.11	-1	666813..668294	-	493	91772677	-	Mbur_0648	-	transposase
596	 41.75	0	668513..669094	-	193	91772678	-	Mbur_0649	-	hypothetical protein
597	 40.90	0	669296..670009	-	237	91772679	-	Mbur_0650	-	oxidoreductase, molybdopterin binding
598	 36.87	-1	670317..670712	+	131	91772680	-	Mbur_0651	-	methyltransferase
599	 40.95	0	670823..671137	+	104	91772681	-	Mbur_0652	-	hypothetical protein
600	 44.65	0	671296..672258	+	320	91772682	-	Mbur_0653	-	N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase
601	 41.14	0	672317..672790	+	157	91772683	-	Mbur_0654	-	hypothetical protein
602	 42.01	0	672897..673910	-	337	91772684	-	Mbur_0655	-	methyltransferase
603	 38.64	0	674134..674868	+	244	91772685	-	Mbur_0656	-	4-vinyl reductase, 4VR
604	 44.06	0	675006..675695	-	229	91772686	-	Mbur_0657	-	hypothetical protein
605	 40.54	0	675720..676274	-	184	91772687	-	Mbur_0658	-	MarR family transcriptional regulator
606	 44.39	0	676430..677596	-	388	91772688	-	Mbur_0659	-	N(2),N(2)-dimethylguanosine tRNA methyltransferase
607	 39.57	0	677621..678085	-	154	91772689	-	Mbur_0660	-	hypothetical protein
608	 44.73	0	678231..678809	+	192	91772690	-	Mbur_0661	-	MerR family transcriptional regulator
609	 42.51	0	678820..679233	+	137	91772691	-	Mbur_0662	-	thioesterase superfamily protein
610	 42.82	0	679250..680893	+	547	91772692	-	Mbur_0663	-	acyl-CoA synthetase
611	 34.33	-1	681786..682994	+	402	91772693	-	Mbur_0665	-	transposase, IS204/IS1001/IS1096/IS1165
612	 45.07	0	683725..686076	-	783	91772694	-	Mbur_0667	-	hypothetical protein
613	 37.32	-1	686248..687174	-	308	91772695	-	Mbur_0668	-	hypothetical protein
614	 36.37	-1	687318..689030	-	570	91772696	-	Mbur_0669	-	cell surfacr protein
615	 44.32	0	689034..689306	-	90	91772697	-	Mbur_0670	-	hypothetical protein
616	 37.65	0	689571..690776	-	401	91772698	-	Mbur_0671	-	hypothetical protein
617	 47.35	+1	690791..691375	-	194	91772699	-	Mbur_0672	-	hypothetical protein
618	 45.37	0	691429..692724	-	431	91772700	-	Mbur_0673	-	hypothetical protein
619	 48.56	+1	693865..694836	+	323	91772701	-	Mbur_0675	-	HEAT repeat-containing PBS lyase
620	 47.67	+1	694833..696032	+	399	91772702	-	Mbur_0676	-	hypothetical protein
621	 34.66	-1	697469..697921	+	150	91772703	-	Mbur_0678	-	hypothetical protein
622	 44.06	0	699277..701001	+	574	91772704	-	Mbur_0680	-	thiamine pyrophosphate requiring enzyme
623	 46.61	+1	702322..703074	+	250	91772705	-	Mbur_0681	-	beta-lactamase-like protein
624	 42.35	0	703120..703773	-	217	91772706	-	Mbur_0682	-	metallophosphoesterase
625	 47.56	+1	703796..704575	-	259	91772707	-	Mbur_0683	-	hypothetical protein
626	 43.54	0	704849..705181	+	110	91772708	-	Mbur_0684	-	protein of unknown function DUF306, Meta and HslJ
627	 41.20	0	705481..705963	+	160	91772709	-	Mbur_0685	-	hypothetical protein
628	 44.59	0	705960..706865	+	301	91772710	-	Mbur_0686	-	SSU ribosomal protein S6P modification protein
629	 44.22	0	706869..707915	+	348	91772711	-	Mbur_0687	-	succinylglutamate desuccinylase/aspartoacylase
630	 38.01	0	708100..709125	+	341	91772712	-	Mbur_0688	-	hypothetical protein
631	 32.47	-2	709180..709410	-	76	91772713	-	Mbur_0689	-	transposase
632	 34.60	-1	709600..711330	-	576	91772714	-	Mbur_0690	-	RNA-directed DNA polymerase
633	 41.59	0	713708..714361	+	217	91772715	-	Mbur_0692	-	hypothetical protein
634	 40.17	0	715198..715665	-	155	91772716	-	Mbur_0693	-	hypothetical protein
635	 42.38	0	715675..717453	-	592	91772717	-	Mbur_0694	-	external sensor signal transduction histidine kinase
636	 43.47	0	717487..717999	-	170	91772718	-	Mbur_0695	-	response regulator receiver
637	 42.55	0	718149..718430	+	93	91772719	-	Mbur_0696	-	hypothetical protein
638	 38.89	0	718494..719249	-	251	91772720	-	Mbur_0697	-	hypothetical protein
639	 36.89	-1	719309..719533	-	74	91772721	-	Mbur_0698	-	hypothetical protein
640	 44.03	0	719570..720784	-	404	91772722	-	Mbur_0699	-	hypothetical protein
641	 41.02	0	720820..722055	-	411	91772723	-	Mbur_0700	-	hypothetical protein
642	 42.84	0	722065..722790	-	241	91772724	-	Mbur_0701	-	ABC transporter, ATPase subunit
643	 33.81	-1	722964..724226	+	420	91772725	-	Mbur_0702	-	proteinase inhibitor I4, serpin
644	 47.29	+1	724470..725759	-	429	91772726	-	Mbur_0703	-	thiamine biosynthesis protein ThiC
645	 44.30	0	725973..726419	+	148	91772727	-	Mbur_0704	-	hypothetical protein
646	 46.65	+1	726570..728912	+	780	91772728	-	Mbur_0705	-	DNA topoisomerase
647	 30.20	-2	729028..729666	-	212	91772729	-	Mbur_0706	-	hypothetical protein
648	 42.32	0	730370..730903	-	177	91772730	-	Mbur_0707	-	nitroreductase
649	 49.11	+1	730975..731982	-	335	91772731	-	Mbur_0708	-	ketol-acid reductoisomerase
650	 44.65	0	732026..732511	-	161	91772732	ilvH	Mbur_0709	-	acetolactate synthase 3 regulatory subunit
651	 46.34	0	732508..734199	-	563	91772733	-	Mbur_0710	-	acetolactate synthase 3 catalytic subunit
652	 47.05	+1	734346..735803	-	485	91772734	-	Mbur_0711	-	(R)-citramalate synthase
653	 47.10	+1	736342..737394	-	350	91772735	-	Mbur_0712	-	cellulase
654	 28.86	-2	737510..738046	-	178	91772736	-	Mbur_0713	-	hypothetical protein
655	 42.26	0	738138..738641	-	167	91772737	-	Mbur_0714	-	hypothetical protein
656	 39.87	0	738836..741160	-	774	91772738	-	Mbur_0715	-	hypothetical protein
657	 42.05	0	741799..742590	+	263	91772739	-	Mbur_0716	-	protease HtpX-like protein
658	 42.45	0	742834..743667	-	277	91772740	-	Mbur_0717	-	hypothetical protein
41.89	MEAN

4.51	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.