version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 876 49.89 +1 1080464..1081768 - 434 73668436 - Mbar_A0897 - methyl-coenzyme M reductase, beta subunit 877 41.59 0 1082187..1083422 + 411 73668437 - Mbar_A0898 - hypothetical protein 878 45.19 0 1083806..1087246 - 1146 73668438 - Mbar_A0899 - DNA polymerase II large subunit 879 39.74 0 1087279..1087512 - 77 73668439 - Mbar_A0900 - hypothetical protein 880 48.73 +1 1087888..1088991 - 367 73668440 - Mbar_A0901 - translation factor SUA5 881 47.86 +1 1089041..1090327 - 428 73668441 rbcL Mbar_A0902 - ribulose bisophosphate carboxylase 882 41.87 0 1091079..1092191 - 370 73668442 - Mbar_A0903 - cation transporter 883 40.63 0 1092900..1094009 - 369 73668443 - Mbar_A0904 - cation transporter 884 41.08 0 1095457..1096566 - 369 73668444 - Mbar_A0905 - hypothetical protein 885 42.97 0 1097933..1098430 - 165 73668445 - Mbar_A0906 - hypothetical protein 886 41.10 0 1098485..1099012 - 175 73668446 - Mbar_A0907 - putative heat shock protein 887 46.14 0 1099166..1101430 - 754 73668447 - Mbar_A0908 - cell division control protein 48 888 44.25 0 1101427..1102113 - 228 73668448 - Mbar_A0909 - ArsR family transcriptional regulator 889 35.44 -1 1102482..1103147 - 221 73668449 - Mbar_A0910 - hypothetical protein 890 44.75 0 1103476..1103913 - 145 73668450 - Mbar_A0911 - hypothetical protein 891 42.67 0 1104764..1105438 - 224 73668451 - Mbar_A0913 - xanthine-guanine phosphoribosyltransferase 892 38.35 0 1105864..1106640 + 258 73668452 - Mbar_A0914 - hypothetical protein 893 34.69 -1 1106628..1107584 - 318 73668453 - Mbar_A0915 - hypothetical protein 894 40.60 0 1108622..1109488 + 288 73668454 - Mbar_A0916 - hypothetical protein 895 43.75 0 1109598..1109789 - 63 73668455 - Mbar_A0917 - hypothetical protein 896 47.75 +1 1110653..1111984 + 443 73668456 - Mbar_A0918 - signal recognition particle protein Srp54 897 47.19 +1 1112593..1113162 - 189 73668457 - Mbar_A0919 - GMP synthase subunit A 898 49.12 +1 1113590..1114387 + 265 73668458 - Mbar_A0920 - fructose-bisphosphate aldolase 899 46.37 0 1114485..1115627 + 380 73668459 - Mbar_A0921 - 3-dehydroquinate synthase 900 45.68 0 1115729..1116457 + 242 73668460 - Mbar_A0922 - 3-dehydroquinate dehydratase 901 46.14 0 1116454..1117296 + 280 73668461 - Mbar_A0923 - shikimate dehydrogenase 902 42.16 0 1117293..1118810 + 505 73668462 - Mbar_A0924 - prephenate dehydrogenase 903 41.89 0 1118895..1120448 + 517 73668463 - Mbar_A0925 - hypothetical protein 904 38.11 0 1120563..1121357 - 264 73668464 - Mbar_A0926 - oligopeptide ABC transporter, ATP-binding protein 905 40.95 0 1121360..1122304 - 314 73668465 - Mbar_A0927 - oligopeptide ABC transporter, ATP-binding protein 906 43.03 0 1122304..1123128 - 274 73668466 - Mbar_A0928 - oligopeptide ABC transporter, permease protein 907 42.34 0 1123131..1124129 - 332 73668467 - Mbar_A0929 - oligopeptide ABC transporter, permease protein 908 41.65 0 1124153..1125919 - 588 73668468 - Mbar_A0930 - oligopeptide ABC transporter, solute-binding protein 909 43.46 0 1125922..1126563 - 213 73668469 - Mbar_A0931 - formylmethanofuran dehydrogenase, subunit E 910 41.92 0 1129297..1132173 + 958 73668470 - Mbar_A0933 - hypothetical protein 911 49.63 +1 1132170..1132838 - 222 73668471 - Mbar_A0934 - triosephosphate isomerase 912 46.90 +1 1133012..1134190 - 392 73668472 - Mbar_A0935 - bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase 913 42.11 0 1134460..1135074 - 204 73668473 - Mbar_A0936 - endonuclease III 914 41.55 0 1135645..1136277 - 210 73668474 - Mbar_A0937 - hypothetical protein 915 37.29 0 1136505..1136681 - 58 73668475 - Mbar_A0938 - hypothetical protein 916 38.56 0 1136747..1136899 - 50 73668476 - Mbar_A0939 - hypothetical protein 917 45.10 0 1137210..1137362 + 50 73668477 - Mbar_A0940 - bacterioferritin 918 42.80 0 1137438..1137680 + 80 73668478 - Mbar_A0941 - bacterioferritin 919 43.47 0 1143794..1145302 + 502 73668479 - Mbar_A0942 - 2-isopropylmalate synthase 920 45.09 0 1145438..1146211 + 257 73668480 - Mbar_A0943 - sec-independent transport protein TatD 921 44.08 0 1146417..1147058 + 213 73668481 - Mbar_A0944 - hypothetical protein 922 45.85 0 1147436..1149409 + 657 73668482 - Mbar_A0945 - hypothetical protein 923 34.35 -1 1150186..1150974 + 262 73668483 - Mbar_A0946 - hypothetical protein 924 35.08 -1 1150971..1154126 + 1051 73668484 - Mbar_A0947 - hypothetical protein 925 43.62 0 1154349..1154630 - 93 73668485 - Mbar_A0948 - hypothetical protein 926 39.53 0 1154734..1154991 - 85 73668486 - Mbar_A0949 - hypothetical protein 927 46.96 +1 1155256..1156422 - 388 73668487 - Mbar_A0950 - iron-sulfur binding reductase 928 48.72 +1 1156427..1157797 - 456 73668488 - Mbar_A0951 - (S)-2-hydroxy-acid dehydrogenase 929 37.93 0 1158230..1159012 - 260 73668489 - Mbar_A0952 - hypothetical protein 930 33.53 -1 1159023..1159541 - 172 73668490 - Mbar_A0953 - hypothetical protein 931 36.02 -1 1159795..1160277 - 160 73668491 - Mbar_A0954 - hypothetical protein 932 35.53 -1 1160743..1161015 - 90 73668492 - Mbar_A0955 - hypothetical protein 933 46.52 0 1162003..1163883 + 626 73668493 - Mbar_A0956 - archaeosine tRNA-ribosyltransferase 934 39.92 0 1164101..1164631 + 176 73668494 - Mbar_A0957 - SSU ribosomal protein S18P alanine acetyltransferase 935 45.88 0 1164615..1164893 - 92 73668495 - Mbar_A0958 - hypothetical protein 936 44.21 0 1165546..1167099 - 517 73668496 - Mbar_A0959 - DNA primase 937 42.93 0 1168616..1170136 + 506 73668497 - Mbar_A0960 - NADH oxidase 938 45.78 0 1170323..1171318 + 331 73668498 - Mbar_A0961 - RNA 3'-terminal-phosphate cyclase 939 43.75 0 1171555..1172178 - 207 73668499 - Mbar_A0962 - RNA 2'-phosphotransferase-like protein 940 43.23 0 1172729..1174183 + 484 73668500 - Mbar_A0963 - replication factor A 941 41.59 0 1174997..1175650 + 217 73668501 - Mbar_A0964 - hypothetical protein 942 43.87 0 1175711..1176526 + 271 73668502 - Mbar_A0965 - hypothetical protein 943 44.28 0 1176869..1177864 + 331 73668503 - Mbar_A0966 - hypothetical protein 944 41.02 0 1178426..1179271 + 281 73668504 - Mbar_A0967 - hypothetical protein 945 43.37 0 1179442..1180218 + 258 73668505 - Mbar_A0968 - hypothetical protein 946 48.54 +1 1180715..1181503 - 262 73668506 - Mbar_A0969 - hypothetical protein 947 40.15 0 1181846..1183018 + 390 73668507 - Mbar_A0970 - hypothetical protein 948 42.67 0 1183334..1184404 + 356 73668508 - Mbar_A0971 - translation elongation factor 949 42.11 0 1184450..1185007 + 185 73668509 - Mbar_A0972 - hypothetical protein 950 42.51 0 1185147..1185920 - 257 73668510 - Mbar_A0973 - hypothetical protein 951 41.25 0 1186182..1186661 - 159 73668511 - Mbar_A0974 - hypothetical protein 952 45.63 0 1186735..1187295 - 186 73668512 - Mbar_A0975 - hypothetical protein 953 42.97 0 1187952..1189196 - 414 73668513 cdc6 Mbar_A0976 - cell division control protein 6 954 43.86 0 1191362..1192549 + 395 73668514 - Mbar_A0977 - L-tyrosine decarboxylase 955 43.74 0 1193106..1194200 + 364 73668515 - Mbar_A0978 - hypothetical protein 956 43.50 0 1194667..1196220 + 517 73668516 - Mbar_A0979 - pheromone shutdown protein 957 45.64 0 1197154..1198047 - 297 73668517 - Mbar_A0980 - tetrahydromethanopterin formyltransferase 958 39.25 0 1200106..1200561 - 151 73668518 - Mbar_A0982 - chemoreceptor glutamine deamidase CheD 959 35.42 -1 1201353..1202261 - 302 73668519 - Mbar_A0983 - chemotaxis protein methyltransferase 960 39.29 0 1202322..1204118 - 598 73668520 - Mbar_A0984 - chemotaxis sensor histidine kinase 961 43.74 0 1204575..1205669 - 364 73668521 - Mbar_A0985 - chemotaxis protein-glutamate methylesterase 962 39.07 0 1205935..1206300 - 121 73668522 - Mbar_A0986 - chemotaxis response regulator 963 36.27 -1 1207613..1207987 + 124 73668523 - Mbar_A0988 - response regulator receiver 964 39.66 0 1208339..1210408 + 689 73668524 - Mbar_A0989 - methyl-accepting chemotaxis protein 965 42.91 0 1210437..1210958 + 173 73668525 - Mbar_A0990 - CheW protein 966 41.45 0 1212434..1212901 + 155 73668526 - Mbar_A0992 - iron dependent repressor 967 42.80 0 1213217..1214188 + 323 73668527 - Mbar_A0993 - zinc ABC transporter, zinc-binding protein 968 45.36 0 1214482..1215246 + 254 73668528 - Mbar_A0995 - zinc ABC transporter, ATP-binding protein 969 43.39 0 1215301..1216125 + 274 73668529 - Mbar_A0996 - zinc ABC transporter, permease protein 970 39.04 0 1216598..1217053 + 151 73668530 - Mbar_A0997 - hypothetical protein 971 39.57 0 1218450..1219571 - 373 73668531 - Mbar_A0998 - iron ABC transporter, solute-binding protein 972 48.48 +1 1220851..1221741 - 296 73668532 - Mbar_A0999 - pyruvate ferredoxin oxidoreductase, beta subunit 973 45.08 0 1221738..1222946 - 402 73668533 - Mbar_A1000 - pyruvate ferredoxin oxidoreductase, alpha subunit 974 40.28 0 1222946..1223233 - 95 73668534 - Mbar_A1001 - pyruvate ferredoxin oxidoreductase, delta subunit 975 47.18 +1 1223230..1223778 - 182 73668535 - Mbar_A1002 - pyruvate ferredoxin oxidoreductase subunit gamma 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0