version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 835 44.53 0 1033537..1034304 - 255 73668395 - Mbar_A0855 - F420-0--gamma-glutamyl ligase 836 36.64 -1 1036408..1036800 + 130 73668396 - Mbar_A0857 - hypothetical protein 837 41.27 0 1037493..1038488 + 331 73668397 - Mbar_A0858 - cation efflux system protein 838 44.59 0 1038656..1039117 - 153 73668398 - Mbar_A0859 - heat shock protein Hsp20 839 44.28 0 1039342..1040538 - 398 73668399 - Mbar_A0860 - cofactor-independent phosphoglycerate mutase 840 45.38 0 1040939..1042357 + 472 73668400 - Mbar_A0861 - aspartate kinase 841 43.71 0 1042381..1043382 + 333 73668401 - Mbar_A0862 - phosphoribosylaminoimidazole synthetase 842 30.10 -2 1044024..1044332 - 102 73668402 - Mbar_A0863 - hypothetical protein 843 40.53 0 1044823..1045197 - 124 73668403 - Mbar_A0864 - hypothetical protein 844 42.05 0 1045194..1045652 - 152 73668404 - Mbar_A0865 - hypothetical protein 845 34.65 -1 1046009..1046311 + 100 73668405 - Mbar_A0866 - hypothetical protein 846 43.74 0 1046910..1047476 - 188 73668406 - Mbar_A0867 - hypothetical protein 847 38.26 0 1047590..1048684 - 364 73668407 - Mbar_A0868 - hypothetical protein 848 43.69 0 1049041..1049523 + 160 73668408 - Mbar_A0869 - hypothetical protein 849 42.85 0 1049907..1051094 + 395 73668409 - Mbar_A0870 - hypothetical protein 850 48.60 +1 1051766..1052977 + 403 73668410 - Mbar_A0871 - acetylornithine aminotransferase 851 46.59 +1 1052958..1054058 + 366 73668411 - Mbar_A0872 - histidinol-phosphate aminotransferase 852 38.38 0 1054244..1054639 - 131 73668412 - Mbar_A0873 - hypothetical protein 853 43.47 0 1054666..1055454 - 262 73668413 - Mbar_A0874 - archaetidylserine synthase 854 41.67 0 1055470..1056081 - 203 73668414 - Mbar_A0875 - phosphatidylserine decarboxylase 855 43.10 0 1056087..1056956 - 289 73668415 - Mbar_A0876 - hypothetical protein 856 41.38 0 1057681..1058115 + 144 73668416 - Mbar_A0877 - MutT-like protein 857 42.86 0 1058075..1058389 + 104 73668417 - Mbar_A0878 - DNA-directed RNA polymerase, subunit M 858 44.72 0 1058686..1059423 + 245 73668418 - Mbar_A0879 - DNA polymerase sliding clamp 859 38.89 0 1059425..1060666 + 413 73668419 - Mbar_A0880 - DNA primase large subunit 860 42.87 0 1060962..1062125 + 387 73668420 - Mbar_A0881 - coenzyme F420 hydrogenase, beta subunit 861 44.68 0 1062456..1062737 + 93 73668421 gatC Mbar_A0882 - aspartyl/glutamyl-tRNA amidotransferase subunit C 862 45.94 0 1062750..1064177 + 475 73668422 - Mbar_A0883 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A 863 44.29 0 1064178..1065665 + 495 73668423 gatB Mbar_A0884 - aspartyl/glutamyl-tRNA amidotransferase subunit B 864 43.57 0 1065961..1066761 - 266 73668424 - Mbar_A0885 - carbon-nitrogen hydrolase 865 45.18 0 1067939..1068850 + 303 73668425 - Mbar_A0886 - hypothetical protein 866 40.49 0 1069044..1070147 - 367 73668426 - Mbar_A0887 - hypothetical protein 867 37.02 0 1070335..1071255 + 306 73668427 - Mbar_A0888 - 5-methylcytosine-specific restriction enzyme 868 47.45 +1 1071814..1072677 + 287 73668428 - Mbar_A0889 - HtpX-2 peptidase 869 42.97 0 1073157..1073810 + 217 73668429 thyA Mbar_A0890 - thymidylate synthase 870 44.59 0 1073929..1075260 + 443 73668430 - Mbar_A0891 - 3-phosphoshikimate 1-carboxyvinyltransferase 871 35.17 -1 1075605..1076585 + 326 73668431 - Mbar_A0892 - hypothetical protein 872 52.48 +2 1076826..1078538 - 570 73668432 - Mbar_A0893 - methyl-coenzyme M reductase, alpha subunit 873 50.33 +1 1078549..1079295 - 248 73668433 - Mbar_A0894 - methyl-coenzyme M reductase, gamma subunit 874 47.02 +1 1079297..1079917 - 206 73668434 - Mbar_A0895 - methyl coenzyme M reductase, subunit D 875 46.51 0 1079924..1080439 - 171 73668435 - Mbar_A0896 - methyl coenzyme M reductase, subunit C 876 49.89 +1 1080464..1081768 - 434 73668436 - Mbar_A0897 - methyl-coenzyme M reductase, beta subunit 877 41.59 0 1082187..1083422 + 411 73668437 - Mbar_A0898 - hypothetical protein 878 45.19 0 1083806..1087246 - 1146 73668438 - Mbar_A0899 - DNA polymerase II large subunit 879 39.74 0 1087279..1087512 - 77 73668439 - Mbar_A0900 - hypothetical protein 880 48.73 +1 1087888..1088991 - 367 73668440 - Mbar_A0901 - translation factor SUA5 881 47.86 +1 1089041..1090327 - 428 73668441 rbcL Mbar_A0902 - ribulose bisophosphate carboxylase 882 41.87 0 1091079..1092191 - 370 73668442 - Mbar_A0903 - cation transporter 883 40.63 0 1092900..1094009 - 369 73668443 - Mbar_A0904 - cation transporter 884 41.08 0 1095457..1096566 - 369 73668444 - Mbar_A0905 - hypothetical protein 885 42.97 0 1097933..1098430 - 165 73668445 - Mbar_A0906 - hypothetical protein 886 41.10 0 1098485..1099012 - 175 73668446 - Mbar_A0907 - putative heat shock protein 887 46.14 0 1099166..1101430 - 754 73668447 - Mbar_A0908 - cell division control protein 48 888 44.25 0 1101427..1102113 - 228 73668448 - Mbar_A0909 - ArsR family transcriptional regulator 889 35.44 -1 1102482..1103147 - 221 73668449 - Mbar_A0910 - hypothetical protein 890 44.75 0 1103476..1103913 - 145 73668450 - Mbar_A0911 - hypothetical protein 891 42.67 0 1104764..1105438 - 224 73668451 - Mbar_A0913 - xanthine-guanine phosphoribosyltransferase 892 38.35 0 1105864..1106640 + 258 73668452 - Mbar_A0914 - hypothetical protein 893 34.69 -1 1106628..1107584 - 318 73668453 - Mbar_A0915 - hypothetical protein 894 40.60 0 1108622..1109488 + 288 73668454 - Mbar_A0916 - hypothetical protein 895 43.75 0 1109598..1109789 - 63 73668455 - Mbar_A0917 - hypothetical protein 896 47.75 +1 1110653..1111984 + 443 73668456 - Mbar_A0918 - signal recognition particle protein Srp54 897 47.19 +1 1112593..1113162 - 189 73668457 - Mbar_A0919 - GMP synthase subunit A 898 49.12 +1 1113590..1114387 + 265 73668458 - Mbar_A0920 - fructose-bisphosphate aldolase 899 46.37 0 1114485..1115627 + 380 73668459 - Mbar_A0921 - 3-dehydroquinate synthase 900 45.68 0 1115729..1116457 + 242 73668460 - Mbar_A0922 - 3-dehydroquinate dehydratase 901 46.14 0 1116454..1117296 + 280 73668461 - Mbar_A0923 - shikimate dehydrogenase 902 42.16 0 1117293..1118810 + 505 73668462 - Mbar_A0924 - prephenate dehydrogenase 903 41.89 0 1118895..1120448 + 517 73668463 - Mbar_A0925 - hypothetical protein 904 38.11 0 1120563..1121357 - 264 73668464 - Mbar_A0926 - oligopeptide ABC transporter, ATP-binding protein 905 40.95 0 1121360..1122304 - 314 73668465 - Mbar_A0927 - oligopeptide ABC transporter, ATP-binding protein 906 43.03 0 1122304..1123128 - 274 73668466 - Mbar_A0928 - oligopeptide ABC transporter, permease protein 907 42.34 0 1123131..1124129 - 332 73668467 - Mbar_A0929 - oligopeptide ABC transporter, permease protein 908 41.65 0 1124153..1125919 - 588 73668468 - Mbar_A0930 - oligopeptide ABC transporter, solute-binding protein 909 43.46 0 1125922..1126563 - 213 73668469 - Mbar_A0931 - formylmethanofuran dehydrogenase, subunit E 910 41.92 0 1129297..1132173 + 958 73668470 - Mbar_A0933 - hypothetical protein 911 49.63 +1 1132170..1132838 - 222 73668471 - Mbar_A0934 - triosephosphate isomerase 912 46.90 +1 1133012..1134190 - 392 73668472 - Mbar_A0935 - bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase 913 42.11 0 1134460..1135074 - 204 73668473 - Mbar_A0936 - endonuclease III 914 41.55 0 1135645..1136277 - 210 73668474 - Mbar_A0937 - hypothetical protein 915 37.29 0 1136505..1136681 - 58 73668475 - Mbar_A0938 - hypothetical protein 916 38.56 0 1136747..1136899 - 50 73668476 - Mbar_A0939 - hypothetical protein 917 45.10 0 1137210..1137362 + 50 73668477 - Mbar_A0940 - bacterioferritin 918 42.80 0 1137438..1137680 + 80 73668478 - Mbar_A0941 - bacterioferritin 919 43.47 0 1143794..1145302 + 502 73668479 - Mbar_A0942 - 2-isopropylmalate synthase 920 45.09 0 1145438..1146211 + 257 73668480 - Mbar_A0943 - sec-independent transport protein TatD 921 44.08 0 1146417..1147058 + 213 73668481 - Mbar_A0944 - hypothetical protein 922 45.85 0 1147436..1149409 + 657 73668482 - Mbar_A0945 - hypothetical protein 923 34.35 -1 1150186..1150974 + 262 73668483 - Mbar_A0946 - hypothetical protein 924 35.08 -1 1150971..1154126 + 1051 73668484 - Mbar_A0947 - hypothetical protein 925 43.62 0 1154349..1154630 - 93 73668485 - Mbar_A0948 - hypothetical protein 926 39.53 0 1154734..1154991 - 85 73668486 - Mbar_A0949 - hypothetical protein 927 46.96 +1 1155256..1156422 - 388 73668487 - Mbar_A0950 - iron-sulfur binding reductase 928 48.72 +1 1156427..1157797 - 456 73668488 - Mbar_A0951 - (S)-2-hydroxy-acid dehydrogenase 929 37.93 0 1158230..1159012 - 260 73668489 - Mbar_A0952 - hypothetical protein 930 33.53 -1 1159023..1159541 - 172 73668490 - Mbar_A0953 - hypothetical protein 931 36.02 -1 1159795..1160277 - 160 73668491 - Mbar_A0954 - hypothetical protein 932 35.53 -1 1160743..1161015 - 90 73668492 - Mbar_A0955 - hypothetical protein 933 46.52 0 1162003..1163883 + 626 73668493 - Mbar_A0956 - archaeosine tRNA-ribosyltransferase 934 39.92 0 1164101..1164631 + 176 73668494 - Mbar_A0957 - SSU ribosomal protein S18P alanine acetyltransferase 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0