version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 539 42.78 0 661812..662552 - 246 73668098 - Mbar_A0552 - XRE family transcriptional regulator 540 45.62 0 662689..663510 + 273 73668099 - Mbar_A0553 - hypothetical protein 541 30.84 -2 663709..664590 + 293 73668100 - Mbar_A0554 - hypothetical protein 542 36.11 -1 664912..665199 - 95 73668101 - Mbar_A0555 - hypothetical protein 543 27.50 -2 665783..666313 + 176 73668102 - Mbar_A0556 - hypothetical protein 544 30.65 -2 666699..667406 + 235 73668103 - Mbar_A0557 - haloacid dehalogenase-like hydrolase family protein 545 32.51 -1 667596..668078 + 160 73668104 - Mbar_A0558 - putative acetyltransferase 546 46.30 0 668238..670142 + 634 73668105 - Mbar_A0559 - hypothetical protein 547 45.72 0 670274..671371 - 365 73668106 - Mbar_A0560 - DNA polymerase IV 548 41.51 0 671799..672617 - 272 73668107 - Mbar_A0562 - putative methyltransferase 549 41.92 0 672610..673482 - 290 73668108 - Mbar_A0563 - hypothetical protein 550 39.61 0 674733..675719 + 328 73668109 - Mbar_A0564 - hypothetical protein 551 44.44 0 676448..676753 + 101 73668110 - Mbar_A0565 - cobalt transport protein CbiN 552 32.87 -1 677383..678024 + 213 73668111 - Mbar_A0566 - hypothetical protein 553 36.72 -1 678062..679243 + 393 73668112 - Mbar_A0567 - hypothetical protein 554 34.15 -1 679418..679786 + 122 73668113 - Mbar_A0568 - transposase 555 41.10 0 680219..680926 - 235 73668114 - Mbar_A0569 - endonuclease III 556 41.91 0 681040..682392 - 450 73668115 - Mbar_A0570 - glutathione reductase (NADPH) 557 46.32 0 682785..684401 + 538 73668116 - Mbar_A0571 - phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase 558 33.33 -1 686250..686441 - 63 73668117 - Mbar_A0572 - hypothetical protein 559 43.34 0 686658..687926 + 422 73668118 - Mbar_A0573 - arsenite permease 560 45.94 0 688258..689352 - 364 73668119 - Mbar_A0574 - GTP-binding protein 561 45.72 0 689769..691697 - 642 73668120 - Mbar_A0575 - molybdenum cofactor biosynthesis protein 562 45.51 0 692109..692987 - 292 73668121 - Mbar_A0576 - branched-chain amino acid aminotransferase 563 45.98 0 693812..694420 - 202 73668122 - Mbar_A0577 - hypothetical protein 564 44.96 0 694570..695730 - 386 73668123 - Mbar_A0578 - hypothetical protein 565 44.95 0 696206..696928 - 240 73668124 - Mbar_A0579 - hypothetical protein 566 45.52 0 697022..698449 - 475 73668125 - Mbar_A0580 - hypothetical protein 567 45.40 0 698446..698793 - 115 73668126 - Mbar_A0581 - ArsR family transcriptional regulator 568 42.27 0 699668..700372 + 234 73668127 - Mbar_A0582 - hypothetical protein 569 44.83 0 700747..701520 - 257 73668128 - Mbar_A0583 - cobalt transport family protein 570 45.76 0 701690..702526 - 278 73668129 - Mbar_A0584 - membrane associated ATPase 571 44.36 0 702502..703326 - 274 73668130 - Mbar_A0585 - cobalt transporter ATP-binding subunit 572 45.21 0 703446..704009 - 187 73668131 - Mbar_A0586 - biotin synthesis BioY protein 573 45.00 0 704805..705284 + 159 73668132 - Mbar_A0587 - acetyltransferase 574 42.19 0 705489..706154 + 221 73668133 - Mbar_A0588 - iron dependent repressor 575 46.66 +1 706270..708183 + 637 73668134 - Mbar_A0589 - ferrous iron transport protein B 576 39.58 0 708400..708639 + 79 73668135 - Mbar_A0590 - hypothetical protein 577 45.71 0 709368..710450 + 360 73668136 - Mbar_A0591 - hypothetical protein 578 44.64 0 710503..714030 + 1175 73668137 - Mbar_A0592 - condensin subunit Smc 579 42.06 0 714023..715042 + 339 73668138 - Mbar_A0593 - condensin subunit ScpA 580 45.43 0 715100..716215 + 371 73668139 - Mbar_A0594 - condensin subunit ScpB 581 44.57 0 716409..716960 + 183 73668140 - Mbar_A0595 - transcription factor 582 41.61 0 717089..718006 + 305 73668141 - Mbar_A0596 - dolichol-phosphate mannosyltransferase 583 48.56 +1 718417..719703 + 428 73668142 - Mbar_A0597 - thiamine biosynthesis protein ThiC 584 40.25 0 720344..720820 + 158 73668143 - Mbar_A0598 - methylated-DNA--protein-cysteine methyltransferase 585 44.76 0 720872..721615 + 247 73668144 - Mbar_A0599 - hypothetical protein 586 37.46 0 722335..723207 + 290 73668145 - Mbar_A0600 - gliding motility protein 587 36.69 -1 723197..724240 + 347 73668146 - Mbar_A0601 - putative ABC-2 type transport system permease protein 588 39.73 0 724814..725329 - 171 73668147 - Mbar_A0602 - hypothetical protein 589 46.01 0 725449..726237 + 262 73668148 - Mbar_A0603 - hypothetical protein 590 43.56 0 726544..728049 + 501 73668149 - Mbar_A0604 - phycocyanin alpha phycocyanobilin lyase related protein 591 38.62 0 728184..728372 - 62 73668150 - Mbar_A0605 - hypothetical protein 592 33.18 -1 728743..729402 + 219 73668151 - Mbar_A0606 - hypothetical protein 593 40.03 0 729498..731333 + 611 73668152 - Mbar_A0607 - hypothetical protein 594 43.30 0 731545..732537 - 330 73668153 - Mbar_A0608 - coenzyme PQQ synthesis protein E 595 39.56 0 732830..733471 - 213 73668154 - Mbar_A0609 - hypothetical protein 596 34.92 -1 733721..734350 - 209 73668155 - Mbar_A0610 - hypothetical protein 597 37.70 0 734606..735223 - 205 73668156 - Mbar_A0611 - hypothetical protein 598 54.52 +2 735929..736249 - 106 73668157 rpl12p Mbar_A0612 - 50S ribosomal protein L12P 599 47.74 +1 736286..737326 - 346 73668158 rplP0 Mbar_A0613 - acidic ribosomal protein P0 600 44.39 0 737327..737968 - 213 73668159 rpl1P Mbar_A0614 - 50S ribosomal protein L1P 601 46.30 0 738208..738693 - 161 73668160 rpl11p Mbar_A0615 - 50S ribosomal protein L11P 602 44.23 0 738812..739270 - 152 73668161 nusG Mbar_A0616 - transcription antitermination protein NusG 603 45.83 0 739267..739482 - 71 73668162 secE Mbar_A0617 - preprotein translocase subunit SecE 604 48.67 +1 739901..741028 - 375 73668163 - Mbar_A0618 - cell division protein FtsZ 605 40.68 0 741394..741978 - 194 73668164 - Mbar_A0619 - hypothetical protein 606 46.22 0 742166..743461 - 431 73668165 - Mbar_A0620 - proteasome-activating nucleotidase 607 42.39 0 743519..744004 + 161 73668166 - Mbar_A0621 - XRE family transcriptional regulator 608 43.18 0 744371..745213 - 280 73668167 - Mbar_A0622 - putative molybdenum cofactor biosynthesis protein 609 45.38 0 745528..746556 + 342 73668168 - Mbar_A0623 - isocitrate dehydrogenase (NADP) 610 43.12 0 746580..747908 - 442 73668169 - Mbar_A0624 - 2-isopropylmalate synthase 611 43.35 0 748679..749227 + 182 73668170 - Mbar_A0625 - precorrin-8W decarboxylase 612 42.86 0 749294..749902 + 202 73668171 - Mbar_A0626 - cobalt-precorrin-2 C(20)-methyltransferase 613 46.50 0 750029..750757 + 242 73668172 - Mbar_A0627 - cobalt-factor II C20-methyltransferase / precorrin-4 C11-methyltransferase 614 45.57 0 751701..752501 + 266 73668173 - Mbar_A0629 - precorrin-3B C17-methyltransferase 615 46.48 0 752491..753228 + 245 73668174 - Mbar_A0630 - precorrin-8X methylmutase 616 37.82 0 753561..754028 - 155 73668175 - Mbar_A0631 - transposase 617 44.70 0 754585..755235 - 216 73668176 - Mbar_A0632 - cytochrome c-type biogenesis protein 618 42.72 0 755364..755981 - 205 73668177 - Mbar_A0633 - thiol-disulfide isomerase/thioredoxin 619 45.79 0 756530..757372 - 280 73668178 - Mbar_A0634 - ATP-binding protein involved in chromosome partitioning 620 47.49 +1 757427..757765 - 112 73668179 - Mbar_A0635 - hypothetical protein 621 40.96 0 758095..758343 - 82 73668180 - Mbar_A0636 - hypothetical protein 622 38.76 0 758634..759167 + 177 73668181 - Mbar_A0637 - hypothetical protein 623 42.22 0 759232..759681 + 149 73668182 - Mbar_A0638 - iron-sulfur binding protein 624 44.30 0 759951..760853 - 300 73668183 - Mbar_A0639 - CoB--CoM heterodisulfide reductase subunit B 625 47.12 +1 760865..761350 - 161 73668184 - Mbar_A0640 - CoB--CoM heterodisulfide reductase subunit C 626 40.84 0 762154..762846 - 230 73668185 - Mbar_A0641 - oligopeptide ABC transporter, ATP-binding protein 627 40.26 0 762831..763769 - 312 73668186 - Mbar_A0642 - oligopeptide ABC transporter, ATP-binding protein 628 43.00 0 763772..764650 - 292 73668187 - Mbar_A0643 - oligopeptide ABC transporter, permease protein 629 40.11 0 764660..765604 - 314 73668188 - Mbar_A0644 - oligopeptide ABC transporter, permease protein 630 41.40 0 765659..767233 - 524 73668189 - Mbar_A0645 - oligopeptide ABC transporter, solute-binding protein 631 41.86 0 767253..768014 - 253 73668190 - Mbar_A0646 - UbiE/COQ5 methyltransferase 632 42.94 0 769855..770562 - 235 73668191 - Mbar_A0647 - reduced coenzyme F420:NADP oxidoreductase 633 42.78 0 770865..771404 - 179 73668192 - Mbar_A0648 - hypothetical protein 634 40.37 0 771949..773142 + 397 73668193 - Mbar_A0649 - Xaa-Pro aminopeptidase 635 37.07 0 773325..774074 - 249 73668194 - Mbar_A0650 - hypothetical protein 636 40.74 0 774085..774381 - 98 73668195 - Mbar_A0651 - hypothetical protein 637 39.81 0 774729..776504 - 591 73668196 - Mbar_A0652 - hypothetical protein 638 38.30 0 776712..777194 - 160 73668197 - Mbar_A0653 - transposase 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0