version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 493 44.23 0 606242..607966 + 574 73668052 - Mbar_A0505 - dolichol-P-glucose synthetase 494 42.58 0 609329..609685 + 118 73668053 - Mbar_A0506 - ArsR family transcriptional regulator 495 40.19 0 609972..610394 - 140 73668054 - Mbar_A0507 - CopG family transcriptional regulator 496 47.08 +1 611136..612503 - 455 73668055 - Mbar_A0508 - coenzyme F390 synthetase 497 44.88 0 612804..613574 - 256 73668056 - Mbar_A0509 - iron compounds ABC transporter, ATP-binding protein 498 44.12 0 613574..614593 - 339 73668057 - Mbar_A0510 - iron compounds ABC transporter, permease protein 499 43.03 0 614586..616358 - 590 73668058 - Mbar_A0511 - hypothetical protein 500 45.67 0 616362..616985 - 207 73668059 - Mbar_A0512 - hypothetical protein 501 43.62 0 616982..618079 - 365 73668060 - Mbar_A0513 - ABC transporter, solute-binding protein 502 34.19 -1 619588..619821 + 77 73668061 - Mbar_A0515 - hypothetical protein 503 46.23 0 619866..620555 + 229 73668062 - Mbar_A0516 - hypothetical protein 504 41.67 0 621134..621529 - 131 73668063 - Mbar_A0517 - hypothetical protein 505 47.08 +1 621547..621837 - 96 73668064 - Mbar_A0518 - hypothetical protein 506 38.69 0 621914..622510 - 198 73668065 - Mbar_A0519 - hypothetical protein 507 41.37 0 623082..623417 + 111 73668066 - Mbar_A0520 - PadR family transcriptional regulator 508 42.77 0 623596..623934 + 112 73668067 - Mbar_A0521 - hypothetical protein 509 41.08 0 624012..624605 + 197 73668068 - Mbar_A0522 - hypothetical protein 510 48.48 +1 624617..624946 - 109 73668069 - Mbar_A0523 - hypothetical protein 511 43.89 0 625084..626172 + 362 73668070 - Mbar_A0524 - hypothetical protein 512 43.59 0 626563..626796 - 77 73668071 - Mbar_A0525 - hypothetical protein 513 27.83 -2 627023..627349 - 108 73668072 - Mbar_A0526 - hypothetical protein 514 42.69 0 627646..629034 - 462 73668073 - Mbar_A0527 - deoxyribodipyrimidine photo-lyase type II 515 43.45 0 629177..629917 - 246 73668074 - Mbar_A0528 - ATP-binding protein PhnP 516 45.51 0 629919..631199 - 426 73668075 - Mbar_A0529 - cell division cycle protein 48-like protein 517 35.42 -1 631683..631826 + 47 73668076 - Mbar_A0530 - hypothetical protein 518 40.90 0 631838..632551 + 237 73668077 - Mbar_A0531 - phosphoribosylaminoimidazole-succinocarboxamide synthase 519 46.65 +1 632653..633876 - 407 73668078 - Mbar_A0532 - hypothetical protein 520 45.08 0 633873..634238 - 121 73668079 - Mbar_A0533 - hypothetical protein 521 41.42 0 634623..634931 - 102 73668080 - Mbar_A0534 - translation initiation factor Sui1 522 34.54 -1 635521..635769 + 82 73668081 - Mbar_A0535 - hypothetical protein 523 48.04 +1 636445..638592 + 715 73668082 - Mbar_A0536 - phosphoribosylformylglycinamidine synthase II 524 43.10 0 639023..640159 + 378 73668083 - Mbar_A0537 - alpha-amylase 525 44.28 0 640156..641352 + 398 73668084 - Mbar_A0538 - alpha-amylase 526 41.85 0 641390..642199 + 269 73668085 - Mbar_A0539 - hypothetical protein 527 43.82 0 642196..644217 + 673 73668086 - Mbar_A0540 - glucoamylase 528 43.40 0 644704..645975 - 423 161712041 - Mbar_A0541 - seryl-tRNA synthetase 529 43.21 0 646230..647414 - 394 73668088 - Mbar_A0542 - signal peptide peptidase A 530 47.77 +1 648158..650290 + 710 73668089 metG Mbar_A0543 - methionyl-tRNA synthetase 531 38.75 0 650847..651566 + 239 73668090 - Mbar_A0544 - hypothetical protein 532 38.45 0 651853..654762 + 969 73668091 - Mbar_A0545 - hypothetical protein 533 35.90 -1 654948..656465 + 505 73668092 - Mbar_A0546 - WD repeat-containing protein 534 44.33 0 656764..657372 - 202 73668093 - Mbar_A0547 - orotate phosphoribosyltransferase 535 44.94 0 657558..658091 - 177 73668094 - Mbar_A0548 - adenylate cyclase 536 44.86 0 659121..659519 - 132 73668095 - Mbar_A0549 - hypothetical protein 537 50.30 +1 659526..660698 - 390 73668096 - Mbar_A0550 - acetyl-CoA acetyltransferase 538 47.62 +1 660715..661764 - 349 73668097 - Mbar_A0551 - hypothetical protein 539 42.78 0 661812..662552 - 246 73668098 - Mbar_A0552 - XRE family transcriptional regulator 540 45.62 0 662689..663510 + 273 73668099 - Mbar_A0553 - hypothetical protein 541 30.84 -2 663709..664590 + 293 73668100 - Mbar_A0554 - hypothetical protein 542 36.11 -1 664912..665199 - 95 73668101 - Mbar_A0555 - hypothetical protein 543 27.50 -2 665783..666313 + 176 73668102 - Mbar_A0556 - hypothetical protein 544 30.65 -2 666699..667406 + 235 73668103 - Mbar_A0557 - haloacid dehalogenase-like hydrolase family protein 545 32.51 -1 667596..668078 + 160 73668104 - Mbar_A0558 - putative acetyltransferase 546 46.30 0 668238..670142 + 634 73668105 - Mbar_A0559 - hypothetical protein 547 45.72 0 670274..671371 - 365 73668106 - Mbar_A0560 - DNA polymerase IV 548 41.51 0 671799..672617 - 272 73668107 - Mbar_A0562 - putative methyltransferase 549 41.92 0 672610..673482 - 290 73668108 - Mbar_A0563 - hypothetical protein 550 39.61 0 674733..675719 + 328 73668109 - Mbar_A0564 - hypothetical protein 551 44.44 0 676448..676753 + 101 73668110 - Mbar_A0565 - cobalt transport protein CbiN 552 32.87 -1 677383..678024 + 213 73668111 - Mbar_A0566 - hypothetical protein 553 36.72 -1 678062..679243 + 393 73668112 - Mbar_A0567 - hypothetical protein 554 34.15 -1 679418..679786 + 122 73668113 - Mbar_A0568 - transposase 555 41.10 0 680219..680926 - 235 73668114 - Mbar_A0569 - endonuclease III 556 41.91 0 681040..682392 - 450 73668115 - Mbar_A0570 - glutathione reductase (NADPH) 557 46.32 0 682785..684401 + 538 73668116 - Mbar_A0571 - phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase 558 33.33 -1 686250..686441 - 63 73668117 - Mbar_A0572 - hypothetical protein 559 43.34 0 686658..687926 + 422 73668118 - Mbar_A0573 - arsenite permease 560 45.94 0 688258..689352 - 364 73668119 - Mbar_A0574 - GTP-binding protein 561 45.72 0 689769..691697 - 642 73668120 - Mbar_A0575 - molybdenum cofactor biosynthesis protein 562 45.51 0 692109..692987 - 292 73668121 - Mbar_A0576 - branched-chain amino acid aminotransferase 563 45.98 0 693812..694420 - 202 73668122 - Mbar_A0577 - hypothetical protein 564 44.96 0 694570..695730 - 386 73668123 - Mbar_A0578 - hypothetical protein 565 44.95 0 696206..696928 - 240 73668124 - Mbar_A0579 - hypothetical protein 566 45.52 0 697022..698449 - 475 73668125 - Mbar_A0580 - hypothetical protein 567 45.40 0 698446..698793 - 115 73668126 - Mbar_A0581 - ArsR family transcriptional regulator 568 42.27 0 699668..700372 + 234 73668127 - Mbar_A0582 - hypothetical protein 569 44.83 0 700747..701520 - 257 73668128 - Mbar_A0583 - cobalt transport family protein 570 45.76 0 701690..702526 - 278 73668129 - Mbar_A0584 - membrane associated ATPase 571 44.36 0 702502..703326 - 274 73668130 - Mbar_A0585 - cobalt transporter ATP-binding subunit 572 45.21 0 703446..704009 - 187 73668131 - Mbar_A0586 - biotin synthesis BioY protein 573 45.00 0 704805..705284 + 159 73668132 - Mbar_A0587 - acetyltransferase 574 42.19 0 705489..706154 + 221 73668133 - Mbar_A0588 - iron dependent repressor 575 46.66 +1 706270..708183 + 637 73668134 - Mbar_A0589 - ferrous iron transport protein B 576 39.58 0 708400..708639 + 79 73668135 - Mbar_A0590 - hypothetical protein 577 45.71 0 709368..710450 + 360 73668136 - Mbar_A0591 - hypothetical protein 578 44.64 0 710503..714030 + 1175 73668137 - Mbar_A0592 - condensin subunit Smc 579 42.06 0 714023..715042 + 339 73668138 - Mbar_A0593 - condensin subunit ScpA 580 45.43 0 715100..716215 + 371 73668139 - Mbar_A0594 - condensin subunit ScpB 581 44.57 0 716409..716960 + 183 73668140 - Mbar_A0595 - transcription factor 582 41.61 0 717089..718006 + 305 73668141 - Mbar_A0596 - dolichol-phosphate mannosyltransferase 583 48.56 +1 718417..719703 + 428 73668142 - Mbar_A0597 - thiamine biosynthesis protein ThiC 584 40.25 0 720344..720820 + 158 73668143 - Mbar_A0598 - methylated-DNA--protein-cysteine methyltransferase 585 44.76 0 720872..721615 + 247 73668144 - Mbar_A0599 - hypothetical protein 586 37.46 0 722335..723207 + 290 73668145 - Mbar_A0600 - gliding motility protein 587 36.69 -1 723197..724240 + 347 73668146 - Mbar_A0601 - putative ABC-2 type transport system permease protein 588 39.73 0 724814..725329 - 171 73668147 - Mbar_A0602 - hypothetical protein 589 46.01 0 725449..726237 + 262 73668148 - Mbar_A0603 - hypothetical protein 590 43.56 0 726544..728049 + 501 73668149 - Mbar_A0604 - phycocyanin alpha phycocyanobilin lyase related protein 591 38.62 0 728184..728372 - 62 73668150 - Mbar_A0605 - hypothetical protein 592 33.18 -1 728743..729402 + 219 73668151 - Mbar_A0606 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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