IslandPath Analysis: Methanosarcina barkeri str. Fusaro



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 41.74   STD DEV: 4.78
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408
3606 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
478	 36.65	-1	587285..587797	-	170	73668037	-	Mbar_A0490	-	hypothetical protein
479	 43.86	0	588372..589112	-	246	73668038	-	Mbar_A0491	-	hypothetical protein
480	 43.33	0	589441..589620	+	59	73668039	-	Mbar_A0492	-	hypothetical protein
481	 40.65	0	589825..590193	-	122	73668040	-	Mbar_A0493	-	camphor resistance protein CrcB
482	 41.99	0	590198..590578	-	126	73668041	-	Mbar_A0494	-	camphor resistance protein CrcB
483	 47.57	+1	591021..592214	-	397	73668042	-	Mbar_A0495	-	molybdenum cofactor biosynthesis protein MoeA2
484	 43.20	0	592235..592528	-	97	73668043	-	Mbar_A0496	-	molybdopterin converting factor small subunit
485	 39.87	0	592608..594260	+	550	73668044	-	Mbar_A0497	-	hypothetical protein
486	 39.90	0	594471..595094	+	207	73668045	-	Mbar_A0498	-	hypothetical protein
487	 42.05	0	595349..596518	+	389	73668046	-	Mbar_A0499	-	NaH antiporter protein
488	 43.83	0	596709..599453	-	914	73668047	-	Mbar_A0500	-	cation-transporting ATPase
489	 43.15	0	599740..601053	+	437	73668048	-	Mbar_A0501	-	hypothetical protein
490	 45.42	0	601612..601884	+	90	73668049	-	Mbar_A0502	-	hypothetical protein
491	 47.66	+1	602097..603527	-	476	73668050	-	Mbar_A0503	-	aldehyde dehydrogenase (NAD(P)+)
492	 40.87	0	603929..606118	+	729	73668051	-	Mbar_A0504	-	hypothetical protein
493	 44.23	0	606242..607966	+	574	73668052	-	Mbar_A0505	-	dolichol-P-glucose synthetase
494	 42.58	0	609329..609685	+	118	73668053	-	Mbar_A0506	-	ArsR family transcriptional regulator
495	 40.19	0	609972..610394	-	140	73668054	-	Mbar_A0507	-	CopG family transcriptional regulator
496	 47.08	+1	611136..612503	-	455	73668055	-	Mbar_A0508	-	coenzyme F390 synthetase
497	 44.88	0	612804..613574	-	256	73668056	-	Mbar_A0509	-	iron compounds ABC transporter, ATP-binding protein
498	 44.12	0	613574..614593	-	339	73668057	-	Mbar_A0510	-	iron compounds ABC transporter, permease protein
499	 43.03	0	614586..616358	-	590	73668058	-	Mbar_A0511	-	hypothetical protein
500	 45.67	0	616362..616985	-	207	73668059	-	Mbar_A0512	-	hypothetical protein
501	 43.62	0	616982..618079	-	365	73668060	-	Mbar_A0513	-	ABC transporter, solute-binding protein
502	 34.19	-1	619588..619821	+	77	73668061	-	Mbar_A0515	-	hypothetical protein
503	 46.23	0	619866..620555	+	229	73668062	-	Mbar_A0516	-	hypothetical protein
504	 41.67	0	621134..621529	-	131	73668063	-	Mbar_A0517	-	hypothetical protein
505	 47.08	+1	621547..621837	-	96	73668064	-	Mbar_A0518	-	hypothetical protein
506	 38.69	0	621914..622510	-	198	73668065	-	Mbar_A0519	-	hypothetical protein
507	 41.37	0	623082..623417	+	111	73668066	-	Mbar_A0520	-	PadR family transcriptional regulator
508	 42.77	0	623596..623934	+	112	73668067	-	Mbar_A0521	-	hypot