version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 456 42.53 0 563677..564426 + 249 73668015 - Mbar_A0468 - hypothetical protein 457 40.22 0 564692..565621 + 309 73668016 - Mbar_A0469 - nickel ABC transporter, permease protein 458 43.07 0 565631..566503 + 290 73668017 - Mbar_A0470 - nickel ABC transporter, permease protein 459 44.90 0 566487..567299 + 270 73668018 - Mbar_A0471 - nickel ABC transporter, ATP-binding protein 460 42.20 0 567311..568291 + 326 73668019 - Mbar_A0472 - nickel ABC transporter, ATP-binding protein 461 44.28 0 568318..569934 + 538 73668020 - Mbar_A0473 - nickel ABC transporter, solute-binding protein 462 41.50 0 569946..570704 + 252 73668021 - Mbar_A0474 - hypothetical protein 463 39.78 0 571073..571258 - 61 73668022 - Mbar_A0475 - stress-responsive transcriptional regulator 464 30.67 -2 571794..572468 - 224 73668023 - Mbar_A0476 - serine O-acetyltransferase 465 41.85 0 572930..574021 - 363 73668024 - Mbar_A0477 - hypothetical protein 466 43.80 0 574059..575042 - 327 73668025 - Mbar_A0478 - hypothetical protein 467 41.45 0 575482..576171 + 229 73668026 - Mbar_A0479 - peroxiredoxin 468 47.62 +1 576445..577263 - 272 73668027 - Mbar_A0480 - pyrroline-5-carboxylate reductase 469 42.01 0 577486..578706 - 406 73668028 - Mbar_A0481 - gamma-glutamyl kinase 470 43.90 0 578787..580130 - 447 73668029 - Mbar_A0482 - glutamate-5-semialdehyde dehydrogenase 471 40.00 0 581397..581801 + 134 73668030 - Mbar_A0483 - hypothetical protein 472 38.43 0 581945..582376 - 143 73668031 - Mbar_A0484 - hypothetical protein 473 38.94 0 582517..582819 - 100 73668032 - Mbar_A0485 - hypothetical protein 474 42.52 0 583700..584809 + 369 73668033 - Mbar_A0486 - chlorohydrolase family protein 475 44.59 0 584828..585280 + 150 73668034 - Mbar_A0487 - universal stress protein 476 44.11 0 585312..586220 + 302 73668035 - Mbar_A0488 - hypothetical protein 477 43.20 0 586436..587134 + 232 73668036 - Mbar_A0489 - hypothetical protein 478 36.65 -1 587285..587797 - 170 73668037 - Mbar_A0490 - hypothetical protein 479 43.86 0 588372..589112 - 246 73668038 - Mbar_A0491 - hypothetical protein 480 43.33 0 589441..589620 + 59 73668039 - Mbar_A0492 - hypothetical protein 481 40.65 0 589825..590193 - 122 73668040 - Mbar_A0493 - camphor resistance protein CrcB 482 41.99 0 590198..590578 - 126 73668041 - Mbar_A0494 - camphor resistance protein CrcB 483 47.57 +1 591021..592214 - 397 73668042 - Mbar_A0495 - molybdenum cofactor biosynthesis protein MoeA2 484 43.20 0 592235..592528 - 97 73668043 - Mbar_A0496 - molybdopterin converting factor small subunit 485 39.87 0 592608..594260 + 550 73668044 - Mbar_A0497 - hypothetical protein 486 39.90 0 594471..595094 + 207 73668045 - Mbar_A0498 - hypothetical protein 487 42.05 0 595349..596518 + 389 73668046 - Mbar_A0499 - NaH antiporter protein 488 43.83 0 596709..599453 - 914 73668047 - Mbar_A0500 - cation-transporting ATPase 489 43.15 0 599740..601053 + 437 73668048 - Mbar_A0501 - hypothetical protein 490 45.42 0 601612..601884 + 90 73668049 - Mbar_A0502 - hypothetical protein 491 47.66 +1 602097..603527 - 476 73668050 - Mbar_A0503 - aldehyde dehydrogenase (NAD(P)+) 492 40.87 0 603929..606118 + 729 73668051 - Mbar_A0504 - hypothetical protein 493 44.23 0 606242..607966 + 574 73668052 - Mbar_A0505 - dolichol-P-glucose synthetase 494 42.58 0 609329..609685 + 118 73668053 - Mbar_A0506 - ArsR family transcriptional regulator 495 40.19 0 609972..610394 - 140 73668054 - Mbar_A0507 - CopG family transcriptional regulator 496 47.08 +1 611136..612503 - 455 73668055 - Mbar_A0508 - coenzyme F390 synthetase 497 44.88 0 612804..613574 - 256 73668056 - Mbar_A0509 - iron compounds ABC transporter, ATP-binding protein 498 44.12 0 613574..614593 - 339 73668057 - Mbar_A0510 - iron compounds ABC transporter, permease protein 499 43.03 0 614586..616358 - 590 73668058 - Mbar_A0511 - hypothetical protein 500 45.67 0 616362..616985 - 207 73668059 - Mbar_A0512 - hypothetical protein 501 43.62 0 616982..618079 - 365 73668060 - Mbar_A0513 - ABC transporter, solute-binding protein 502 34.19 -1 619588..619821 + 77 73668061 - Mbar_A0515 - hypothetical protein 503 46.23 0 619866..620555 + 229 73668062 - Mbar_A0516 - hypothetical protein 504 41.67 0 621134..621529 - 131 73668063 - Mbar_A0517 - hypothetical protein 505 47.08 +1 621547..621837 - 96 73668064 - Mbar_A0518 - hypothetical protein 506 38.69 0 621914..622510 - 198 73668065 - Mbar_A0519 - hypothetical protein 507 41.37 0 623082..623417 + 111 73668066 - Mbar_A0520 - PadR family transcriptional regulator 508 42.77 0 623596..623934 + 112 73668067 - Mbar_A0521 - hypothetical protein 509 41.08 0 624012..624605 + 197 73668068 - Mbar_A0522 - hypothetical protein 510 48.48 +1 624617..624946 - 109 73668069 - Mbar_A0523 - hypothetical protein 511 43.89 0 625084..626172 + 362 73668070 - Mbar_A0524 - hypothetical protein 512 43.59 0 626563..626796 - 77 73668071 - Mbar_A0525 - hypothetical protein 513 27.83 -2 627023..627349 - 108 73668072 - Mbar_A0526 - hypothetical protein 514 42.69 0 627646..629034 - 462 73668073 - Mbar_A0527 - deoxyribodipyrimidine photo-lyase type II 515 43.45 0 629177..629917 - 246 73668074 - Mbar_A0528 - ATP-binding protein PhnP 516 45.51 0 629919..631199 - 426 73668075 - Mbar_A0529 - cell division cycle protein 48-like protein 517 35.42 -1 631683..631826 + 47 73668076 - Mbar_A0530 - hypothetical protein 518 40.90 0 631838..632551 + 237 73668077 - Mbar_A0531 - phosphoribosylaminoimidazole-succinocarboxamide synthase 519 46.65 +1 632653..633876 - 407 73668078 - Mbar_A0532 - hypothetical protein 520 45.08 0 633873..634238 - 121 73668079 - Mbar_A0533 - hypothetical protein 521 41.42 0 634623..634931 - 102 73668080 - Mbar_A0534 - translation initiation factor Sui1 522 34.54 -1 635521..635769 + 82 73668081 - Mbar_A0535 - hypothetical protein 523 48.04 +1 636445..638592 + 715 73668082 - Mbar_A0536 - phosphoribosylformylglycinamidine synthase II 524 43.10 0 639023..640159 + 378 73668083 - Mbar_A0537 - alpha-amylase 525 44.28 0 640156..641352 + 398 73668084 - Mbar_A0538 - alpha-amylase 526 41.85 0 641390..642199 + 269 73668085 - Mbar_A0539 - hypothetical protein 527 43.82 0 642196..644217 + 673 73668086 - Mbar_A0540 - glucoamylase 528 43.40 0 644704..645975 - 423 161712041 - Mbar_A0541 - seryl-tRNA synthetase 529 43.21 0 646230..647414 - 394 73668088 - Mbar_A0542 - signal peptide peptidase A 530 47.77 +1 648158..650290 + 710 73668089 metG Mbar_A0543 - methionyl-tRNA synthetase 531 38.75 0 650847..651566 + 239 73668090 - Mbar_A0544 - hypothetical protein 532 38.45 0 651853..654762 + 969 73668091 - Mbar_A0545 - hypothetical protein 533 35.90 -1 654948..656465 + 505 73668092 - Mbar_A0546 - WD repeat-containing protein 534 44.33 0 656764..657372 - 202 73668093 - Mbar_A0547 - orotate phosphoribosyltransferase 535 44.94 0 657558..658091 - 177 73668094 - Mbar_A0548 - adenylate cyclase 536 44.86 0 659121..659519 - 132 73668095 - Mbar_A0549 - hypothetical protein 537 50.30 +1 659526..660698 - 390 73668096 - Mbar_A0550 - acetyl-CoA acetyltransferase 538 47.62 +1 660715..661764 - 349 73668097 - Mbar_A0551 - hypothetical protein 539 42.78 0 661812..662552 - 246 73668098 - Mbar_A0552 - XRE family transcriptional regulator 540 45.62 0 662689..663510 + 273 73668099 - Mbar_A0553 - hypothetical protein 541 30.84 -2 663709..664590 + 293 73668100 - Mbar_A0554 - hypothetical protein 542 36.11 -1 664912..665199 - 95 73668101 - Mbar_A0555 - hypothetical protein 543 27.50 -2 665783..666313 + 176 73668102 - Mbar_A0556 - hypothetical protein 544 30.65 -2 666699..667406 + 235 73668103 - Mbar_A0557 - haloacid dehalogenase-like hydrolase family protein 545 32.51 -1 667596..668078 + 160 73668104 - Mbar_A0558 - putative acetyltransferase 546 46.30 0 668238..670142 + 634 73668105 - Mbar_A0559 - hypothetical protein 547 45.72 0 670274..671371 - 365 73668106 - Mbar_A0560 - DNA polymerase IV 548 41.51 0 671799..672617 - 272 73668107 - Mbar_A0562 - putative methyltransferase 549 41.92 0 672610..673482 - 290 73668108 - Mbar_A0563 - hypothetical protein 550 39.61 0 674733..675719 + 328 73668109 - Mbar_A0564 - hypothetical protein 551 44.44 0 676448..676753 + 101 73668110 - Mbar_A0565 - cobalt transport protein CbiN 552 32.87 -1 677383..678024 + 213 73668111 - Mbar_A0566 - hypothetical protein 553 36.72 -1 678062..679243 + 393 73668112 - Mbar_A0567 - hypothetical protein 554 34.15 -1 679418..679786 + 122 73668113 - Mbar_A0568 - transposase 555 41.10 0 680219..680926 - 235 73668114 - Mbar_A0569 - endonuclease III 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0