version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 412 54.70 +2 509684..510778 + 364 73667971 - Mbar_A0423 - FMN oxidoreductase protein 413 54.67 +2 510961..511185 + 74 73667972 - Mbar_A0424 - hypothetical protein 414 50.57 +1 511626..513122 + 498 73667973 fumC Mbar_A0425 - fumarate hydratase 415 35.63 -1 515146..515886 - 246 73667974 - Mbar_A0426 - hypothetical protein 416 32.56 -1 516198..517106 - 302 73667975 - Mbar_A0427 - hypothetical protein 417 52.91 +2 518082..519833 + 583 73667976 - Mbar_A0428 - acetolactate synthase 418 47.45 +1 520348..521757 - 469 73667977 - Mbar_A0429 - acetyl-CoA decarbonylase/synthase complex subunit gamma 419 50.34 +1 521761..523077 - 438 73667978 - Mbar_A0430 - acetyl-CoA decarbonylase/synthase complex subunit delta 420 42.65 0 523658..524419 - 253 73667979 - Mbar_A0431 - carbon-monoxide dehydrogenase accessory protein 421 47.57 +1 524476..525894 - 472 73667980 - Mbar_A0432 - acetyl-CoA decarbonylase/synthase complex subunit beta 422 46.78 +1 525919..526431 - 170 73667981 - Mbar_A0433 - acetyl-CoA decarbonylase/synthase complex subunit epsilon 423 50.85 +1 526434..528854 - 806 73667982 - Mbar_A0434 - acetyl-CoA decarbonylase/synthase complex subunit alpha 424 41.81 0 531749..532255 + 168 73667983 - Mbar_A0435 - HTH DNA-binding protein 425 41.09 0 533281..533538 - 85 73667984 - Mbar_A0436 - hypothetical protein 426 31.01 -2 533732..534463 - 243 73667985 - Mbar_A0437 - transposase, putative 427 46.23 0 535540..537252 - 570 73667986 - Mbar_A0438 - acetolactate synthase large subunit 428 28.79 -2 538536..538931 + 131 73667987 - Mbar_A0439 - hypothetical protein 429 39.63 0 539581..539850 - 89 73667988 - Mbar_A0440 - hypothetical protein 430 33.02 -1 540969..541283 + 104 73667989 - Mbar_A0441 - hypothetical protein 431 35.69 -1 541280..541534 + 84 73667990 - Mbar_A0442 - hypothetical protein 432 38.05 0 542032..542328 - 98 73667991 - Mbar_A0444 - nucleotidyltransferase 433 37.82 0 544183..544650 - 155 73667992 - Mbar_A0445 - transposase 434 27.74 -2 544796..545296 - 166 73667993 - Mbar_A0446 - hypothetical protein 435 31.06 -2 545587..546510 - 307 73667994 - Mbar_A0447 - hypothetical protein 436 28.98 -2 546707..547579 + 290 73667995 - Mbar_A0448 - hypothetical protein 437 53.08 +2 547965..548840 - 291 73667996 - Mbar_A0449 - coenzyme F420-reducing hydrogenase subunit beta 438 53.06 +2 548833..549714 - 293 73667997 - Mbar_A0450 - coenzyme F420-reducing hydrogenase, gamma subunit 439 51.67 +2 549701..550180 - 159 73667998 - Mbar_A0451 - coenzyme F420-reducing hydrogenase, delta subunit 440 53.17 +2 550186..551556 - 456 73667999 - Mbar_A0452 - coenzyme F420-reducing hydrogenase, alpha subunit 441 21.32 -2 551705..551962 + 85 73668000 - Mbar_A0453 - hypothetical protein 442 46.67 +1 552991..553440 + 149 73668001 - Mbar_A0454 - 30S ribosomal protein S19e 443 48.24 +1 553561..553929 + 122 73668002 - Mbar_A0455 - hypothetical protein 444 44.01 0 553935..554552 + 205 73668003 - Mbar_A0456 - ATP-binding protein 445 46.79 +1 554835..554990 + 51 73668004 rpl39e Mbar_A0457 - 50S ribosomal protein L39e 446 45.19 0 555009..555278 + 89 73668005 - Mbar_A0458 - 50S ribosomal protein L31e 447 47.58 +1 555311..555970 + 219 73668006 - Mbar_A0459 - translation initiation factor IF-6 448 38.62 0 556008..556196 + 62 73668007 rplX Mbar_A0460 - 50S ribosomal protein LX 449 48.05 +1 556202..556636 + 144 73668008 - Mbar_A0461 - prefoldin subunit alpha 450 43.74 0 556748..558016 + 422 73668009 - Mbar_A0462 - signal recognition particle-docking protein FtsY 451 47.01 +1 558137..558889 - 250 73668010 - Mbar_A0463 - ubiquinone/menaquinone biosynthesis methyltransferase 452 44.87 0 558905..559684 - 259 73668011 - Mbar_A0464 - ubiquinone/menaquinone biosynthesis methyltransferase 453 47.37 +1 559687..560484 - 265 73668012 - Mbar_A0465 - Fe(III) dicitrate ABC transporter, ATP-binding protein 454 49.14 +1 560481..561524 - 347 73668013 - Mbar_A0466 - Fe(III) dicitrate ABC transporter, permease 455 44.76 0 561555..562709 - 384 73668014 - Mbar_A0467 - Fe(III) dicitrate ABC transporter, permease 456 42.53 0 563677..564426 + 249 73668015 - Mbar_A0468 - hypothetical protein 457 40.22 0 564692..565621 + 309 73668016 - Mbar_A0469 - nickel ABC transporter, permease protein 458 43.07 0 565631..566503 + 290 73668017 - Mbar_A0470 - nickel ABC transporter, permease protein 459 44.90 0 566487..567299 + 270 73668018 - Mbar_A0471 - nickel ABC transporter, ATP-binding protein 460 42.20 0 567311..568291 + 326 73668019 - Mbar_A0472 - nickel ABC transporter, ATP-binding protein 461 44.28 0 568318..569934 + 538 73668020 - Mbar_A0473 - nickel ABC transporter, solute-binding protein 462 41.50 0 569946..570704 + 252 73668021 - Mbar_A0474 - hypothetical protein 463 39.78 0 571073..571258 - 61 73668022 - Mbar_A0475 - stress-responsive transcriptional regulator 464 30.67 -2 571794..572468 - 224 73668023 - Mbar_A0476 - serine O-acetyltransferase 465 41.85 0 572930..574021 - 363 73668024 - Mbar_A0477 - hypothetical protein 466 43.80 0 574059..575042 - 327 73668025 - Mbar_A0478 - hypothetical protein 467 41.45 0 575482..576171 + 229 73668026 - Mbar_A0479 - peroxiredoxin 468 47.62 +1 576445..577263 - 272 73668027 - Mbar_A0480 - pyrroline-5-carboxylate reductase 469 42.01 0 577486..578706 - 406 73668028 - Mbar_A0481 - gamma-glutamyl kinase 470 43.90 0 578787..580130 - 447 73668029 - Mbar_A0482 - glutamate-5-semialdehyde dehydrogenase 471 40.00 0 581397..581801 + 134 73668030 - Mbar_A0483 - hypothetical protein 472 38.43 0 581945..582376 - 143 73668031 - Mbar_A0484 - hypothetical protein 473 38.94 0 582517..582819 - 100 73668032 - Mbar_A0485 - hypothetical protein 474 42.52 0 583700..584809 + 369 73668033 - Mbar_A0486 - chlorohydrolase family protein 475 44.59 0 584828..585280 + 150 73668034 - Mbar_A0487 - universal stress protein 476 44.11 0 585312..586220 + 302 73668035 - Mbar_A0488 - hypothetical protein 477 43.20 0 586436..587134 + 232 73668036 - Mbar_A0489 - hypothetical protein 478 36.65 -1 587285..587797 - 170 73668037 - Mbar_A0490 - hypothetical protein 479 43.86 0 588372..589112 - 246 73668038 - Mbar_A0491 - hypothetical protein 480 43.33 0 589441..589620 + 59 73668039 - Mbar_A0492 - hypothetical protein 481 40.65 0 589825..590193 - 122 73668040 - Mbar_A0493 - camphor resistance protein CrcB 482 41.99 0 590198..590578 - 126 73668041 - Mbar_A0494 - camphor resistance protein CrcB 483 47.57 +1 591021..592214 - 397 73668042 - Mbar_A0495 - molybdenum cofactor biosynthesis protein MoeA2 484 43.20 0 592235..592528 - 97 73668043 - Mbar_A0496 - molybdopterin converting factor small subunit 485 39.87 0 592608..594260 + 550 73668044 - Mbar_A0497 - hypothetical protein 486 39.90 0 594471..595094 + 207 73668045 - Mbar_A0498 - hypothetical protein 487 42.05 0 595349..596518 + 389 73668046 - Mbar_A0499 - NaH antiporter protein 488 43.83 0 596709..599453 - 914 73668047 - Mbar_A0500 - cation-transporting ATPase 489 43.15 0 599740..601053 + 437 73668048 - Mbar_A0501 - hypothetical protein 490 45.42 0 601612..601884 + 90 73668049 - Mbar_A0502 - hypothetical protein 491 47.66 +1 602097..603527 - 476 73668050 - Mbar_A0503 - aldehyde dehydrogenase (NAD(P)+) 492 40.87 0 603929..606118 + 729 73668051 - Mbar_A0504 - hypothetical protein 493 44.23 0 606242..607966 + 574 73668052 - Mbar_A0505 - dolichol-P-glucose synthetase 494 42.58 0 609329..609685 + 118 73668053 - Mbar_A0506 - ArsR family transcriptional regulator 495 40.19 0 609972..610394 - 140 73668054 - Mbar_A0507 - CopG family transcriptional regulator 496 47.08 +1 611136..612503 - 455 73668055 - Mbar_A0508 - coenzyme F390 synthetase 497 44.88 0 612804..613574 - 256 73668056 - Mbar_A0509 - iron compounds ABC transporter, ATP-binding protein 498 44.12 0 613574..614593 - 339 73668057 - Mbar_A0510 - iron compounds ABC transporter, permease protein 499 43.03 0 614586..616358 - 590 73668058 - Mbar_A0511 - hypothetical protein 500 45.67 0 616362..616985 - 207 73668059 - Mbar_A0512 - hypothetical protein 501 43.62 0 616982..618079 - 365 73668060 - Mbar_A0513 - ABC transporter, solute-binding protein 502 34.19 -1 619588..619821 + 77 73668061 - Mbar_A0515 - hypothetical protein 503 46.23 0 619866..620555 + 229 73668062 - Mbar_A0516 - hypothetical protein 504 41.67 0 621134..621529 - 131 73668063 - Mbar_A0517 - hypothetical protein 505 47.08 +1 621547..621837 - 96 73668064 - Mbar_A0518 - hypothetical protein 506 38.69 0 621914..622510 - 198 73668065 - Mbar_A0519 - hypothetical protein 507 41.37 0 623082..623417 + 111 73668066 - Mbar_A0520 - PadR family transcriptional regulator 508 42.77 0 623596..623934 + 112 73668067 - Mbar_A0521 - hypothetical protein 509 41.08 0 624012..624605 + 197 73668068 - Mbar_A0522 - hypothetical protein 510 48.48 +1 624617..624946 - 109 73668069 - Mbar_A0523 - hypothetical protein 511 43.89 0 625084..626172 + 362 73668070 - Mbar_A0524 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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