version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 362 36.83 -1 438111..441368 + 1085 73667921 - Mbar_A0372 - hypothetical protein 363 37.69 0 441460..442629 + 389 73667922 - Mbar_A0373 - hexosyltransferase 364 34.19 -1 442632..443687 + 351 73667923 - Mbar_A0374 - glycosyltransferase 365 37.17 0 443684..444856 + 390 73667924 - Mbar_A0375 - hexosyltransferase 366 38.97 0 445726..446133 - 135 73667925 - Mbar_A0376 - hypothetical protein 367 40.42 0 446983..447222 - 79 73667926 - Mbar_A0377 - hypothetical protein 368 45.12 0 447685..447930 - 81 73667927 - Mbar_A0378 - A1AO H+ ATPase subunit K 369 39.15 0 448643..449896 + 417 73667928 - Mbar_A0380 - hypothetical protein 370 42.54 0 449928..450383 - 151 73667929 - Mbar_A0381 - hypothetical protein 371 45.75 0 450601..452904 - 767 73667930 - Mbar_A0382 - hydrogenase maturation protein 372 42.42 0 453184..453348 - 54 73667931 - Mbar_A0383 - hypothetical protein 373 43.27 0 453365..453988 - 207 73667932 - Mbar_A0384 - V-type ATP synthase subunit D 374 49.39 +1 453994..455376 - 460 73667933 - Mbar_A0385 - V-type ATP synthase subunit B 375 48.99 +1 455379..457115 - 578 73667934 - Mbar_A0386 - V-type ATP synthase subunit A 376 43.89 0 457106..457408 - 100 73667935 - Mbar_A0387 - V-type ATP synthase subunit F 377 41.46 0 457408..458490 - 360 73667936 - Mbar_A0388 - V-type ATP synthase subunit C 378 41.12 0 458497..459048 - 183 73667937 - Mbar_A0389 - V-type ATP synthase subunit E 379 45.53 0 459242..459487 - 81 73667938 - Mbar_A0390 - A1AO H+ ATPase subunit K 380 41.96 0 459492..461426 - 644 73667939 - Mbar_A0391 - V-type ATP synthase subunit I 381 42.42 0 461419..461748 - 109 73667940 - Mbar_A0392 - H(+)-transporting ATP synthase, subunit H 382 44.33 0 462503..463684 - 393 73667941 - Mbar_A0393 - metallo cofactor biosynthesis protein 383 41.49 0 463836..464693 - 285 73667942 - Mbar_A0394 - polyprenyl synthetase 384 43.28 0 467271..468818 - 515 73667943 - Mbar_A0395 - hypothetical protein 385 41.71 0 468919..469443 - 174 73667944 - Mbar_A0396 - endonuclease III 386 47.36 +1 469578..470525 - 315 73667945 - Mbar_A0397 - ADP-ribosylglycohydrolase 387 41.09 0 471541..472713 - 390 73667946 - Mbar_A0398 - hypothetical protein 388 31.40 -2 473154..473723 + 189 73667947 - Mbar_A0399 - hypothetical protein 389 47.10 +1 474343..475584 - 413 73667948 - Mbar_A0400 - proteasome-activating nucleotidase 390 37.80 0 476854..477099 + 81 73667949 - Mbar_A0401 - hypothetical protein 391 44.09 0 477081..477461 + 126 73667950 - Mbar_A0402 - hypothetical protein 392 43.84 0 477744..479018 + 424 73667951 - Mbar_A0403 - adenylosuccinate synthetase 393 42.72 0 479284..482832 - 1182 73667952 - Mbar_A0404 - hypothetical protein 394 52.15 +2 483434..484645 - 403 73667953 - Mbar_A0405 - transporter 395 43.17 0 484883..487717 - 944 73667954 - Mbar_A0406 - cation-transporting ATPase 396 37.50 0 488993..489280 - 95 73667955 - Mbar_A0407 - hypothetical protein 397 39.83 0 489597..490319 + 240 73667956 - Mbar_A0408 - peptidoglycan GlcNAc deacetylase 398 37.98 0 490501..491748 - 415 73667957 - Mbar_A0409 - peptide chain release factor 1 399 42.33 0 492434..493000 + 188 73667958 - Mbar_A0410 - tetrahydromethanopterin S-methyltransferase subunit A 400 35.69 -1 493367..493918 + 183 73667959 - Mbar_A0411 - hypothetical protein 401 29.81 -2 494518..496050 + 510 73667960 - Mbar_A0412 - hypothetical protein 402 32.99 -1 496273..497142 + 289 73667961 - Mbar_A0413 - hypothetical protein 403 34.49 -1 497197..498669 + 490 73667962 - Mbar_A0414 - hypothetical protein 404 39.34 0 499764..500678 + 304 73667963 - Mbar_A0415 - hypothetical protein 405 39.10 0 501106..502146 - 346 73667964 - Mbar_A0416 - hypothetical protein 406 36.41 -1 503269..504048 - 259 73667965 - Mbar_A0417 - hypothetical protein 407 40.44 0 504506..504730 - 74 73667966 - Mbar_A0418 - hypothetical protein 408 40.11 0 504814..505182 - 122 73667967 - Mbar_A0419 - hypothetical protein 409 52.96 +2 506086..507114 + 342 73667968 - Mbar_A0420 - F420-dependent glucose-6-phosphate dehydrogenase 410 50.05 +1 507143..509326 + 727 73667969 - Mbar_A0421 - hypothetical protein 411 42.69 0 509307..509648 + 113 73667970 - Mbar_A0422 - hypothetical protein 412 54.70 +2 509684..510778 + 364 73667971 - Mbar_A0423 - FMN oxidoreductase protein 413 54.67 +2 510961..511185 + 74 73667972 - Mbar_A0424 - hypothetical protein 414 50.57 +1 511626..513122 + 498 73667973 fumC Mbar_A0425 - fumarate hydratase 415 35.63 -1 515146..515886 - 246 73667974 - Mbar_A0426 - hypothetical protein 416 32.56 -1 516198..517106 - 302 73667975 - Mbar_A0427 - hypothetical protein 417 52.91 +2 518082..519833 + 583 73667976 - Mbar_A0428 - acetolactate synthase 418 47.45 +1 520348..521757 - 469 73667977 - Mbar_A0429 - acetyl-CoA decarbonylase/synthase complex subunit gamma 419 50.34 +1 521761..523077 - 438 73667978 - Mbar_A0430 - acetyl-CoA decarbonylase/synthase complex subunit delta 420 42.65 0 523658..524419 - 253 73667979 - Mbar_A0431 - carbon-monoxide dehydrogenase accessory protein 421 47.57 +1 524476..525894 - 472 73667980 - Mbar_A0432 - acetyl-CoA decarbonylase/synthase complex subunit beta 422 46.78 +1 525919..526431 - 170 73667981 - Mbar_A0433 - acetyl-CoA decarbonylase/synthase complex subunit epsilon 423 50.85 +1 526434..528854 - 806 73667982 - Mbar_A0434 - acetyl-CoA decarbonylase/synthase complex subunit alpha 424 41.81 0 531749..532255 + 168 73667983 - Mbar_A0435 - HTH DNA-binding protein 425 41.09 0 533281..533538 - 85 73667984 - Mbar_A0436 - hypothetical protein 426 31.01 -2 533732..534463 - 243 73667985 - Mbar_A0437 - transposase, putative 427 46.23 0 535540..537252 - 570 73667986 - Mbar_A0438 - acetolactate synthase large subunit 428 28.79 -2 538536..538931 + 131 73667987 - Mbar_A0439 - hypothetical protein 429 39.63 0 539581..539850 - 89 73667988 - Mbar_A0440 - hypothetical protein 430 33.02 -1 540969..541283 + 104 73667989 - Mbar_A0441 - hypothetical protein 431 35.69 -1 541280..541534 + 84 73667990 - Mbar_A0442 - hypothetical protein 432 38.05 0 542032..542328 - 98 73667991 - Mbar_A0444 - nucleotidyltransferase 433 37.82 0 544183..544650 - 155 73667992 - Mbar_A0445 - transposase 434 27.74 -2 544796..545296 - 166 73667993 - Mbar_A0446 - hypothetical protein 435 31.06 -2 545587..546510 - 307 73667994 - Mbar_A0447 - hypothetical protein 436 28.98 -2 546707..547579 + 290 73667995 - Mbar_A0448 - hypothetical protein 437 53.08 +2 547965..548840 - 291 73667996 - Mbar_A0449 - coenzyme F420-reducing hydrogenase subunit beta 438 53.06 +2 548833..549714 - 293 73667997 - Mbar_A0450 - coenzyme F420-reducing hydrogenase, gamma subunit 439 51.67 +2 549701..550180 - 159 73667998 - Mbar_A0451 - coenzyme F420-reducing hydrogenase, delta subunit 440 53.17 +2 550186..551556 - 456 73667999 - Mbar_A0452 - coenzyme F420-reducing hydrogenase, alpha subunit 441 21.32 -2 551705..551962 + 85 73668000 - Mbar_A0453 - hypothetical protein 442 46.67 +1 552991..553440 + 149 73668001 - Mbar_A0454 - 30S ribosomal protein S19e 443 48.24 +1 553561..553929 + 122 73668002 - Mbar_A0455 - hypothetical protein 444 44.01 0 553935..554552 + 205 73668003 - Mbar_A0456 - ATP-binding protein 445 46.79 +1 554835..554990 + 51 73668004 rpl39e Mbar_A0457 - 50S ribosomal protein L39e 446 45.19 0 555009..555278 + 89 73668005 - Mbar_A0458 - 50S ribosomal protein L31e 447 47.58 +1 555311..555970 + 219 73668006 - Mbar_A0459 - translation initiation factor IF-6 448 38.62 0 556008..556196 + 62 73668007 rplX Mbar_A0460 - 50S ribosomal protein LX 449 48.05 +1 556202..556636 + 144 73668008 - Mbar_A0461 - prefoldin subunit alpha 450 43.74 0 556748..558016 + 422 73668009 - Mbar_A0462 - signal recognition particle-docking protein FtsY 451 47.01 +1 558137..558889 - 250 73668010 - Mbar_A0463 - ubiquinone/menaquinone biosynthesis methyltransferase 452 44.87 0 558905..559684 - 259 73668011 - Mbar_A0464 - ubiquinone/menaquinone biosynthesis methyltransferase 453 47.37 +1 559687..560484 - 265 73668012 - Mbar_A0465 - Fe(III) dicitrate ABC transporter, ATP-binding protein 454 49.14 +1 560481..561524 - 347 73668013 - Mbar_A0466 - Fe(III) dicitrate ABC transporter, permease 455 44.76 0 561555..562709 - 384 73668014 - Mbar_A0467 - Fe(III) dicitrate ABC transporter, permease 456 42.53 0 563677..564426 + 249 73668015 - Mbar_A0468 - hypothetical protein 457 40.22 0 564692..565621 + 309 73668016 - Mbar_A0469 - nickel ABC transporter, permease protein 458 43.07 0 565631..566503 + 290 73668017 - Mbar_A0470 - nickel ABC transporter, permease protein 459 44.90 0 566487..567299 + 270 73668018 - Mbar_A0471 - nickel ABC transporter, ATP-binding protein 460 42.20 0 567311..568291 + 326 73668019 - Mbar_A0472 - nickel ABC transporter, ATP-binding protein 461 44.28 0 568318..569934 + 538 73668020 - Mbar_A0473 - nickel ABC transporter, solute-binding protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0