version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3340 39.91 0 4441941..4442624 - 227 73670900 - Mbar_A3462 - hypothetical protein 3341 46.02 0 4442964..4444145 - 393 73670901 - Mbar_A3463 - aminotransferase 3342 43.50 0 4444226..4444717 - 163 73670902 - Mbar_A3464 - AsnC family transcriptional regulator 3343 43.12 0 4444788..4445165 - 125 73670903 - Mbar_A3465 - 30S ribosomal protein S8e 3344 38.84 0 4446107..4446433 + 108 73670904 - Mbar_A3466 - hypothetical protein 3345 46.23 0 4446799..4447488 + 229 73670905 - Mbar_A3467 - hypothetical protein 3346 39.49 0 4447880..4448431 - 183 73670906 - Mbar_A3468 - multimeric flavodoxin WrbA family protein 3347 38.26 0 4448424..4449032 - 202 73670907 - Mbar_A3469 - galactoside-O-acetyltransferase 3348 41.92 0 4450089..4450589 + 166 73670908 - Mbar_A3470 - hypothetical protein 3349 47.32 +1 4450778..4451392 + 204 73670909 - Mbar_A3471 - orotate phosphoribosyltransferase 3350 45.05 0 4451959..4454091 - 710 73670910 - Mbar_A3472 - hypothetical protein 3351 40.63 0 4454777..4455571 + 264 73670911 - Mbar_A3473 - SPFH domain-containing protein/band 7 family protein 3352 42.44 0 4455616..4456944 + 442 73670912 - Mbar_A3474 - nodulation efficiency protein NfeD 3353 46.29 0 4457199..4458533 - 444 73670913 - Mbar_A3475 - hypothetical protein 3354 47.45 +1 4458729..4459337 - 202 73670914 hisH Mbar_A3476 - imidazole glycerol phosphate synthase subunit HisH 3355 43.52 0 4459496..4459711 - 71 73670915 - Mbar_A3477 - hypothetical protein 3356 34.24 -1 4460232..4461005 - 257 73670916 - Mbar_A3478 - hypothetical protein 3357 44.24 0 4462681..4463166 + 161 73670917 - Mbar_A3480 - hypothetical protein 3358 44.37 0 4463209..4463670 + 153 73670918 - Mbar_A3481 - hypothetical protein 3359 39.48 0 4465553..4466170 + 205 73670919 - Mbar_A3483 - hypothetical protein 3360 43.35 0 4466798..4467346 + 182 73670920 - Mbar_A3484 - hypothetical protein 3361 48.40 +1 4467368..4469146 - 592 73670921 - Mbar_A3485 - multidrug efflux protein 3362 43.59 0 4469152..4469619 - 155 73670922 - Mbar_A3486 - PadR family transcriptional regulator 3363 41.96 0 4470204..4471061 - 285 73670923 - Mbar_A3487 - hypothetical protein 3364 32.39 -1 4471651..4472073 + 140 73670924 - Mbar_A3488 - hypothetical protein 3365 37.39 0 4472265..4473572 - 435 73670925 - Mbar_A3489 - transposase 3366 46.54 +1 4473732..4475654 - 640 73670926 - Mbar_A3490 - ATPase 3367 37.53 0 4475817..4477628 - 603 73670927 - Mbar_A3491 - potassium uptake protein Kup 3368 44.03 0 4478390..4479847 + 485 73670928 - Mbar_A3492 - integral membrane protein 3369 37.69 0 4480485..4480943 + 152 73670929 - Mbar_A3493 - MarR family transcriptional regulator 3370 40.22 0 4482330..4484915 + 861 73670930 - Mbar_A3494 - hypothetical protein 3371 33.22 -1 4485666..4486538 + 290 73670931 - Mbar_A3495 - hypothetical protein 3372 30.62 -2 4486542..4487204 + 220 73670932 - Mbar_A3496 - hypothetical protein 3373 42.75 0 4487852..4488265 + 137 73670933 - Mbar_A3497 - hypothetical protein 3374 47.00 +1 4488461..4489894 - 477 73670934 - Mbar_A3498 - amidophosphoribosyltransferase 3375 40.35 0 4489944..4490114 - 56 73670935 rpl37e Mbar_A3499 - 50S ribosomal protein L37e 3376 46.12 0 4490265..4490483 - 72 73670936 - Mbar_A3500 - small nuclear ribonucleoprotein 3377 48.78 +1 4490945..4492291 + 448 73670937 - Mbar_A3501 - hydroxymethylpyrimidine kinase 3378 29.41 -2 4492465..4492719 - 84 73670938 - Mbar_A3502 - hypothetical protein 3379 46.57 +1 4492772..4494070 + 432 73670939 - Mbar_A3503 - tryptophan synthase subunit beta 3380 41.67 0 4494668..4494895 - 75 73670940 - Mbar_A3504 - hypothetical protein 3381 37.50 0 4495060..4495467 - 135 73670941 - Mbar_A3505 - hypothetical protein 3382 37.99 0 4495954..4496361 - 135 73670942 - Mbar_A3506 - hypothetical protein 3383 46.47 0 4496463..4497764 - 433 73670943 hisD Mbar_A3507 - histidinol dehydrogenase 3384 47.63 +1 4498153..4500342 - 729 73670944 - Mbar_A3508 - ski2-like helicase 3385 46.86 +1 4500573..4502339 - 588 73670945 - Mbar_A3509 - putative ATPase RIL 3386 41.31 0 4503102..4504091 + 329 73670946 - Mbar_A3510 - hypothetical protein 3387 47.30 +1 4505142..4506050 - 302 73670947 - Mbar_A3512 - ornithine carbamoyltransferase 3388 45.08 0 4506377..4507678 - 433 73670948 - Mbar_A3513 - phosphoribosylamine--glycine ligase 3389 41.16 0 4508146..4508541 + 131 73670949 - Mbar_A3514 - hypothetical protein 3390 44.33 0 4508576..4509139 - 187 73670950 - Mbar_A3515 - orotate phosphoribosyltransferase 3391 45.64 0 4509229..4509756 - 175 73670951 - Mbar_A3516 - hypothetical protein 3392 33.74 -1 4509822..4510064 - 80 73670952 - Mbar_A3517 - hypothetical protein 3393 47.17 +1 4511099..4512703 - 534 73670953 - Mbar_A3518 - CTP synthetase 3394 38.84 0 4513420..4514163 - 247 73670954 - Mbar_A3519 - hypothetical protein 3395 45.24 0 4514178..4514345 - 55 73670955 - Mbar_A3520 - hypothetical protein 3396 25.17 -2 4516385..4516837 - 150 73670956 - Mbar_A3522 - hypothetical protein 3397 29.52 -2 4516838..4517728 - 296 73670957 - Mbar_A3523 - hypothetical protein 3398 35.05 -1 4518069..4518827 + 252 73670958 - Mbar_A3524 - hypothetical protein 3399 49.44 +1 4520175..4522049 + 624 73670959 - Mbar_A3525 - carbon monoxide dehydrogenase 3400 49.20 +1 4522075..4522572 + 165 73670960 - Mbar_A3526 - carbon-monoxide dehydrogenase, Fe-S subunit 3401 41.89 0 4522761..4523216 + 151 73670961 - Mbar_A3527 - universal stress protein 3402 42.60 0 4523351..4524289 + 312 73670962 - Mbar_A3528 - hypothetical protein 3403 44.00 0 4525123..4525572 + 149 73670963 - Mbar_A3529 - universal stress protein 3404 45.69 0 4525964..4527274 - 436 73670964 - Mbar_A3530 - PmbA/TldD family protein 3405 46.56 +1 4527274..4528611 - 445 73670965 - Mbar_A3531 - PmbA/TldD family protein 3406 47.26 +1 4528614..4530710 - 698 73670966 - Mbar_A3532 - ATP-dependent protease Lon 3407 43.95 0 4531797..4532813 + 338 73670967 - Mbar_A3533 - hypothetical protein 3408 39.53 0 4532920..4533258 - 112 73670968 - Mbar_A3534 - hypothetical protein 3409 37.43 0 4533808..4537179 + 1123 73670969 - Mbar_A3535 - hypothetical protein 3410 37.65 0 4537347..4537832 - 161 73670970 - Mbar_A3536 - putative sensory transduction histidine kinase 3411 31.77 -2 4537996..4538187 + 63 73670971 - Mbar_A3537 - hypothetical protein 3412 39.78 0 4538238..4540502 - 754 73670972 - Mbar_A3538 - hypothetical protein 3413 42.72 0 4541541..4541753 - 70 73670973 - Mbar_A3539 - hypothetical protein 3414 40.09 0 4541961..4542419 + 152 73670974 - Mbar_A3540 - hypothetical protein 3415 47.16 +1 4542771..4544021 + 416 73670975 - Mbar_A3541 - L-threonine synthase 3416 47.69 +1 4544112..4545260 + 382 73670976 - Mbar_A3542 - sulfopyruvate decarboxylase subunit alpha / sulfopyruvate decarboxylase subunit beta 3417 29.68 -2 4545926..4546882 + 318 73670977 - Mbar_A3543 - hypothetical protein 3418 25.17 -2 4546872..4547471 + 199 73670978 - Mbar_A3544 - hypothetical protein 3419 27.75 -2 4547452..4549440 + 662 73670979 - Mbar_A3545 - hypothetical protein 3420 46.24 0 4549741..4551057 - 438 73670980 - Mbar_A3546 - hypothetical protein 3421 42.32 0 4551177..4551944 - 255 73670981 - Mbar_A3547 - hypothetical protein 3422 43.66 0 4553840..4554052 + 70 73670982 - Mbar_A3548 - hypothetical protein 3423 42.11 0 4554999..4555397 - 132 73670983 - Mbar_A3549 - hypothetical protein 3424 43.12 0 4556236..4558053 - 605 73670984 - Mbar_A3550 - cobalt transport ATP-binding protein 3425 41.44 0 4558139..4559002 + 287 73670985 - Mbar_A3551 - cobalt ABC transporter, permease protein 3426 42.56 0 4559057..4560292 - 411 73670986 - Mbar_A3552 - hypothetical protein 3427 42.90 0 4561346..4563133 + 595 73670987 - Mbar_A3553 - hypothetical protein 3428 42.55 0 4563102..4564088 + 328 73670988 - Mbar_A3554 - cell surface glycoprotein 3429 42.81 0 4564113..4564787 + 224 73670989 - Mbar_A3555 - ABC transporter, ATP-binding protein 3430 47.15 +1 4565448..4565903 + 151 73670990 - Mbar_A3556 - hypothetical protein 3431 37.96 0 4566359..4566574 + 71 73670991 - Mbar_A3557 - hypothetical protein 3432 44.56 0 4566648..4566941 + 97 73670992 - Mbar_A3558 - ArsR family transcriptional regulator 3433 43.18 0 4567129..4568001 + 290 73670993 - Mbar_A3559 - hypothetical protein 3434 44.91 0 4568108..4568971 - 287 73670994 - Mbar_A3560 - MerR family transcriptional regulator 3435 40.95 0 4570355..4571707 + 450 73670995 - Mbar_A3561 - glutathione reductase (NADPH) 3436 43.80 0 4572422..4573663 + 413 73670996 pgk Mbar_A3562 - phosphoglycerate kinase 3437 40.98 0 4574161..4574709 + 182 73670997 - Mbar_A3563 - rubrerythrin 3438 45.03 0 4575034..4576050 + 338 73670998 - Mbar_A3564 - glyceraldehyde-3-phosphate dehydrogenase 3439 37.15 0 4576993..4577463 + 156 73670999 - Mbar_A3565 - universal stress protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0