version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3294 46.15 0 4378993..4380123 + 376 73670854 - Mbar_A3416 - FO synthase subunit 2 3295 45.89 0 4380180..4381334 + 384 73670855 - Mbar_A3417 - FO synthase subunit 2 3296 43.22 0 4381752..4382378 + 208 73670856 - Mbar_A3418 - hypothetical protein 3297 34.32 -1 4382591..4383196 + 201 73670857 - Mbar_A3419 - transcription regulation protein 3298 43.46 0 4383300..4384820 + 506 73670858 - Mbar_A3420 - MoaA/NifB/PqqE family protein 3299 48.02 +1 4385319..4385495 + 58 73670859 - Mbar_A3421 - ferredoxin 3300 46.24 0 4385492..4386715 + 407 73670860 - Mbar_A3422 - geranylgeranyl reductase 3301 42.49 0 4387695..4389125 - 476 73670861 - Mbar_A3423 - trk system potassium uptake protein 3302 44.10 0 4389181..4390527 - 448 73670862 trkA Mbar_A3424 - potassium transporter peripheral membrane component 3303 41.76 0 4391026..4391844 - 272 73670863 - Mbar_A3425 - molybdenum ABC transporter, solute-binding protein 3304 34.76 -1 4392270..4392902 - 210 73670864 - Mbar_A3426 - hypothetical protein 3305 39.29 0 4393481..4394185 - 234 73670865 - Mbar_A3427 - ArsR family transcriptional regulator 3306 35.13 -1 4394471..4395139 + 222 73670866 - Mbar_A3428 - cytochrome c-type biogenesis protein ccdA 3307 41.46 0 4395450..4396901 - 483 73670867 - Mbar_A3429 - sodium transport protein 3308 43.50 0 4396905..4398251 - 448 73670868 trkA Mbar_A3430 - potassium transporter peripheral membrane component 3309 30.91 -2 4398590..4398919 + 109 73670869 - Mbar_A3431 - hypothetical protein 3310 47.81 +1 4398991..4400157 - 388 73670870 - Mbar_A3432 - chaperone protein 3311 47.67 +1 4400267..4402129 - 620 73670871 - Mbar_A3433 - heat shock protein 70 3312 44.13 0 4402413..4403042 - 209 73670872 - Mbar_A3434 - heat shock protein 3313 40.96 0 4403170..4403628 - 152 73670873 - Mbar_A3435 - hypothetical protein 3314 44.79 0 4403983..4404942 + 319 73670874 - Mbar_A3436 - hypothetical protein 3315 45.93 0 4405058..4406041 + 327 73670875 - Mbar_A3437 - hypothetical protein 3316 45.65 0 4406438..4407103 + 221 73670876 - Mbar_A3438 - 1-pyrroline-5-carboxylate synthetase 3317 49.71 +1 4407297..4407467 + 56 73670877 - Mbar_A3439 - hypothetical protein 3318 43.70 0 4407561..4407830 + 89 73670878 ef1B Mbar_A3440 - elongation factor 1-beta 3319 49.91 +1 4408642..4409715 - 357 73670879 - Mbar_A3441 - Fe-S oxidoreductase of MoeA/NarA subfamily 3320 38.18 0 4410324..4410962 - 212 73670880 - Mbar_A3442 - TetR family transcriptional regulator 3321 40.56 0 4411249..4412397 + 382 73670881 - Mbar_A3443 - hypothetical protein 3322 44.19 0 4412422..4413591 + 389 73670882 - Mbar_A3444 - putative ABC transporter permease protein 3323 42.56 0 4413739..4414908 + 389 73670883 - Mbar_A3445 - hypothetical protein 3324 40.20 0 4415180..4415863 + 227 73670884 - Mbar_A3446 - ABC transporter, ATP-binding protein 3325 39.83 0 4417461..4421093 + 1210 73670885 - Mbar_A3447 - hypothetical protein 3326 39.81 0 4421132..4421563 + 143 73670886 - Mbar_A3448 - putative transcriptional regulator 3327 41.91 0 4423231..4423743 - 170 73670887 - Mbar_A3449 - hypothetical protein 3328 31.27 -2 4424732..4425409 + 225 73670888 - Mbar_A3450 - uncharacterized membrane protein 3329 34.89 -1 4426636..4426956 + 106 73670889 - Mbar_A3451 - hypothetical protein 3330 48.13 +1 4427143..4428372 - 409 73670890 hisS Mbar_A3452 - histidyl-tRNA synthetase 3331 45.54 0 4428727..4430217 + 496 73670891 - Mbar_A3453 - L-threonine O-3-phosphate decarboxylase 3332 46.50 0 4430214..4431200 + 328 73670892 - Mbar_A3454 - adenosylcobinamide-phosphate synthase 3333 44.75 0 4431343..4431885 + 180 73670893 - Mbar_A3455 - hypothetical protein 3334 45.08 0 4431920..4432762 + 280 73670894 - Mbar_A3456 - cobalamin-5'-phosphate synthase 3335 43.63 0 4432747..4433358 + 203 73670895 - Mbar_A3457 - putative nucleotidyltransferase 3336 47.54 +1 4433402..4434112 + 236 73670896 - Mbar_A3458 - ABC transporter, ATP-binding protein 3337 44.86 0 4434116..4435078 + 320 73670897 - Mbar_A3459 - ABC transporter, ATP-binding protein 3338 38.85 0 4435111..4435563 + 150 73670898 - Mbar_A3460 - hypothetical protein 3339 41.31 0 4436688..4441691 + 1667 73670899 - Mbar_A3461 - hypothetical protein 3340 39.91 0 4441941..4442624 - 227 73670900 - Mbar_A3462 - hypothetical protein 3341 46.02 0 4442964..4444145 - 393 73670901 - Mbar_A3463 - aminotransferase 3342 43.50 0 4444226..4444717 - 163 73670902 - Mbar_A3464 - AsnC family transcriptional regulator 3343 43.12 0 4444788..4445165 - 125 73670903 - Mbar_A3465 - 30S ribosomal protein S8e 3344 38.84 0 4446107..4446433 + 108 73670904 - Mbar_A3466 - hypothetical protein 3345 46.23 0 4446799..4447488 + 229 73670905 - Mbar_A3467 - hypothetical protein 3346 39.49 0 4447880..4448431 - 183 73670906 - Mbar_A3468 - multimeric flavodoxin WrbA family protein 3347 38.26 0 4448424..4449032 - 202 73670907 - Mbar_A3469 - galactoside-O-acetyltransferase 3348 41.92 0 4450089..4450589 + 166 73670908 - Mbar_A3470 - hypothetical protein 3349 47.32 +1 4450778..4451392 + 204 73670909 - Mbar_A3471 - orotate phosphoribosyltransferase 3350 45.05 0 4451959..4454091 - 710 73670910 - Mbar_A3472 - hypothetical protein 3351 40.63 0 4454777..4455571 + 264 73670911 - Mbar_A3473 - SPFH domain-containing protein/band 7 family protein 3352 42.44 0 4455616..4456944 + 442 73670912 - Mbar_A3474 - nodulation efficiency protein NfeD 3353 46.29 0 4457199..4458533 - 444 73670913 - Mbar_A3475 - hypothetical protein 3354 47.45 +1 4458729..4459337 - 202 73670914 hisH Mbar_A3476 - imidazole glycerol phosphate synthase subunit HisH 3355 43.52 0 4459496..4459711 - 71 73670915 - Mbar_A3477 - hypothetical protein 3356 34.24 -1 4460232..4461005 - 257 73670916 - Mbar_A3478 - hypothetical protein 3357 44.24 0 4462681..4463166 + 161 73670917 - Mbar_A3480 - hypothetical protein 3358 44.37 0 4463209..4463670 + 153 73670918 - Mbar_A3481 - hypothetical protein 3359 39.48 0 4465553..4466170 + 205 73670919 - Mbar_A3483 - hypothetical protein 3360 43.35 0 4466798..4467346 + 182 73670920 - Mbar_A3484 - hypothetical protein 3361 48.40 +1 4467368..4469146 - 592 73670921 - Mbar_A3485 - multidrug efflux protein 3362 43.59 0 4469152..4469619 - 155 73670922 - Mbar_A3486 - PadR family transcriptional regulator 3363 41.96 0 4470204..4471061 - 285 73670923 - Mbar_A3487 - hypothetical protein 3364 32.39 -1 4471651..4472073 + 140 73670924 - Mbar_A3488 - hypothetical protein 3365 37.39 0 4472265..4473572 - 435 73670925 - Mbar_A3489 - transposase 3366 46.54 +1 4473732..4475654 - 640 73670926 - Mbar_A3490 - ATPase 3367 37.53 0 4475817..4477628 - 603 73670927 - Mbar_A3491 - potassium uptake protein Kup 3368 44.03 0 4478390..4479847 + 485 73670928 - Mbar_A3492 - integral membrane protein 3369 37.69 0 4480485..4480943 + 152 73670929 - Mbar_A3493 - MarR family transcriptional regulator 3370 40.22 0 4482330..4484915 + 861 73670930 - Mbar_A3494 - hypothetical protein 3371 33.22 -1 4485666..4486538 + 290 73670931 - Mbar_A3495 - hypothetical protein 3372 30.62 -2 4486542..4487204 + 220 73670932 - Mbar_A3496 - hypothetical protein 3373 42.75 0 4487852..4488265 + 137 73670933 - Mbar_A3497 - hypothetical protein 3374 47.00 +1 4488461..4489894 - 477 73670934 - Mbar_A3498 - amidophosphoribosyltransferase 3375 40.35 0 4489944..4490114 - 56 73670935 rpl37e Mbar_A3499 - 50S ribosomal protein L37e 3376 46.12 0 4490265..4490483 - 72 73670936 - Mbar_A3500 - small nuclear ribonucleoprotein 3377 48.78 +1 4490945..4492291 + 448 73670937 - Mbar_A3501 - hydroxymethylpyrimidine kinase 3378 29.41 -2 4492465..4492719 - 84 73670938 - Mbar_A3502 - hypothetical protein 3379 46.57 +1 4492772..4494070 + 432 73670939 - Mbar_A3503 - tryptophan synthase subunit beta 3380 41.67 0 4494668..4494895 - 75 73670940 - Mbar_A3504 - hypothetical protein 3381 37.50 0 4495060..4495467 - 135 73670941 - Mbar_A3505 - hypothetical protein 3382 37.99 0 4495954..4496361 - 135 73670942 - Mbar_A3506 - hypothetical protein 3383 46.47 0 4496463..4497764 - 433 73670943 hisD Mbar_A3507 - histidinol dehydrogenase 3384 47.63 +1 4498153..4500342 - 729 73670944 - Mbar_A3508 - ski2-like helicase 3385 46.86 +1 4500573..4502339 - 588 73670945 - Mbar_A3509 - putative ATPase RIL 3386 41.31 0 4503102..4504091 + 329 73670946 - Mbar_A3510 - hypothetical protein 3387 47.30 +1 4505142..4506050 - 302 73670947 - Mbar_A3512 - ornithine carbamoyltransferase 3388 45.08 0 4506377..4507678 - 433 73670948 - Mbar_A3513 - phosphoribosylamine--glycine ligase 3389 41.16 0 4508146..4508541 + 131 73670949 - Mbar_A3514 - hypothetical protein 3390 44.33 0 4508576..4509139 - 187 73670950 - Mbar_A3515 - orotate phosphoribosyltransferase 3391 45.64 0 4509229..4509756 - 175 73670951 - Mbar_A3516 - hypothetical protein 3392 33.74 -1 4509822..4510064 - 80 73670952 - Mbar_A3517 - hypothetical protein 3393 47.17 +1 4511099..4512703 - 534 73670953 - Mbar_A3518 - CTP synthetase 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0