version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3263 48.00 +1 4344996..4345445 - 149 73670823 - Mbar_A3385 - nucleoside diphosphate kinase 3264 44.97 0 4345486..4345674 - 62 73670824 - Mbar_A3386 - 50S ribosomal protein L24e 3265 49.10 +1 4345690..4345911 - 73 73670825 rps28e Mbar_A3387 - 30S ribosomal protein S28e 3266 45.18 0 4345936..4346298 - 120 73670826 rpl7ae Mbar_A3388 - 50S ribosomal protein L7Ae 3267 42.28 0 4346607..4347254 + 215 73670827 - Mbar_A3389 - hypothetical protein 3268 41.94 0 4347928..4349391 - 487 73670828 - Mbar_A3390 - hypothetical protein 3269 29.35 -2 4349574..4349774 - 66 73670829 - Mbar_A3391 - hypothetical protein 3270 30.63 -2 4349755..4350087 - 110 73670830 - Mbar_A3392 - hypothetical protein 3271 42.24 0 4350837..4352531 - 564 73670831 - Mbar_A3393 - cell surface protein 3272 44.35 0 4352888..4353577 + 229 73670832 - Mbar_A3394 - uncharacterized Fe-S protein 3273 34.15 -1 4354157..4355011 - 284 73670833 - Mbar_A3395 - hypothetical protein 3274 37.84 0 4355407..4355850 + 147 73670834 - Mbar_A3396 - hypothetical protein 3275 31.91 -2 4356297..4356788 + 163 73670835 - Mbar_A3397 - hypothetical protein 3276 36.35 -1 4356907..4357404 - 165 73670836 - Mbar_A3398 - ribosomal-protein-alanine acetyltransferase 3277 37.78 0 4358074..4364364 - 2096 73670837 - Mbar_A3399 - hypothetical protein 3278 45.48 0 4364898..4365284 - 128 73670838 - Mbar_A3400 - F420H2 dehydrogenase subunit O 3279 48.55 +1 4365298..4366743 - 481 73670839 - Mbar_A3401 - F420H2 dehydrogenase subunit N 3280 48.19 +1 4366747..4368234 - 495 73670840 - Mbar_A3402 - F420H2 dehydrogenase subunit M 3281 48.05 +1 4368234..4370237 - 667 73670841 - Mbar_A3403 - F420H2 dehydrogenase subunit L 3282 45.87 0 4370246..4370548 - 100 73670842 - Mbar_A3404 - F420H2 dehydrogenase subunit K 3283 48.81 +1 4370677..4370928 - 83 73670843 - Mbar_A3405 - F420H2 dehydrogenase subunit 3284 45.02 0 4370918..4371208 - 96 73670844 - Mbar_A3406 - NADH dehydrogenase subunit J 3285 47.20 +1 4371205..4371615 - 136 73670845 - Mbar_A3407 - F420H2 dehydrogenase subunit I 3286 44.67 0 4371619..4372659 - 346 73670846 - Mbar_A3408 - F420H2 dehydrogenase subunit H 3287 46.67 +1 4372665..4373789 - 374 73670847 - Mbar_A3409 - F420H2 dehydrogenase subunit D 3288 43.19 0 4373799..4374275 - 158 73670848 - Mbar_A3410 - NADH dehydrogenase subunit C 3289 43.60 0 4374323..4374877 - 184 73670849 - Mbar_A3411 - F420H2 dehydrogenase subunit B 3290 42.93 0 4374865..4375239 - 124 73670850 - Mbar_A3412 - F420H2 dehydrogenase subunit A 3291 47.53 +1 4376495..4376656 + 53 73670851 - Mbar_A3413 - putative ferredoxin 3292 46.79 +1 4376653..4377930 + 425 73670852 - Mbar_A3414 - phytoene dehydrogenase family protein 3293 46.93 +1 4377988..4378965 + 325 73670853 cofG Mbar_A3415 - FO synthase subunit 1 3294 46.15 0 4378993..4380123 + 376 73670854 - Mbar_A3416 - FO synthase subunit 2 3295 45.89 0 4380180..4381334 + 384 73670855 - Mbar_A3417 - FO synthase subunit 2 3296 43.22 0 4381752..4382378 + 208 73670856 - Mbar_A3418 - hypothetical protein 3297 34.32 -1 4382591..4383196 + 201 73670857 - Mbar_A3419 - transcription regulation protein 3298 43.46 0 4383300..4384820 + 506 73670858 - Mbar_A3420 - MoaA/NifB/PqqE family protein 3299 48.02 +1 4385319..4385495 + 58 73670859 - Mbar_A3421 - ferredoxin 3300 46.24 0 4385492..4386715 + 407 73670860 - Mbar_A3422 - geranylgeranyl reductase 3301 42.49 0 4387695..4389125 - 476 73670861 - Mbar_A3423 - trk system potassium uptake protein 3302 44.10 0 4389181..4390527 - 448 73670862 trkA Mbar_A3424 - potassium transporter peripheral membrane component 3303 41.76 0 4391026..4391844 - 272 73670863 - Mbar_A3425 - molybdenum ABC transporter, solute-binding protein 3304 34.76 -1 4392270..4392902 - 210 73670864 - Mbar_A3426 - hypothetical protein 3305 39.29 0 4393481..4394185 - 234 73670865 - Mbar_A3427 - ArsR family transcriptional regulator 3306 35.13 -1 4394471..4395139 + 222 73670866 - Mbar_A3428 - cytochrome c-type biogenesis protein ccdA 3307 41.46 0 4395450..4396901 - 483 73670867 - Mbar_A3429 - sodium transport protein 3308 43.50 0 4396905..4398251 - 448 73670868 trkA Mbar_A3430 - potassium transporter peripheral membrane component 3309 30.91 -2 4398590..4398919 + 109 73670869 - Mbar_A3431 - hypothetical protein 3310 47.81 +1 4398991..4400157 - 388 73670870 - Mbar_A3432 - chaperone protein 3311 47.67 +1 4400267..4402129 - 620 73670871 - Mbar_A3433 - heat shock protein 70 3312 44.13 0 4402413..4403042 - 209 73670872 - Mbar_A3434 - heat shock protein 3313 40.96 0 4403170..4403628 - 152 73670873 - Mbar_A3435 - hypothetical protein 3314 44.79 0 4403983..4404942 + 319 73670874 - Mbar_A3436 - hypothetical protein 3315 45.93 0 4405058..4406041 + 327 73670875 - Mbar_A3437 - hypothetical protein 3316 45.65 0 4406438..4407103 + 221 73670876 - Mbar_A3438 - 1-pyrroline-5-carboxylate synthetase 3317 49.71 +1 4407297..4407467 + 56 73670877 - Mbar_A3439 - hypothetical protein 3318 43.70 0 4407561..4407830 + 89 73670878 ef1B Mbar_A3440 - elongation factor 1-beta 3319 49.91 +1 4408642..4409715 - 357 73670879 - Mbar_A3441 - Fe-S oxidoreductase of MoeA/NarA subfamily 3320 38.18 0 4410324..4410962 - 212 73670880 - Mbar_A3442 - TetR family transcriptional regulator 3321 40.56 0 4411249..4412397 + 382 73670881 - Mbar_A3443 - hypothetical protein 3322 44.19 0 4412422..4413591 + 389 73670882 - Mbar_A3444 - putative ABC transporter permease protein 3323 42.56 0 4413739..4414908 + 389 73670883 - Mbar_A3445 - hypothetical protein 3324 40.20 0 4415180..4415863 + 227 73670884 - Mbar_A3446 - ABC transporter, ATP-binding protein 3325 39.83 0 4417461..4421093 + 1210 73670885 - Mbar_A3447 - hypothetical protein 3326 39.81 0 4421132..4421563 + 143 73670886 - Mbar_A3448 - putative transcriptional regulator 3327 41.91 0 4423231..4423743 - 170 73670887 - Mbar_A3449 - hypothetical protein 3328 31.27 -2 4424732..4425409 + 225 73670888 - Mbar_A3450 - uncharacterized membrane protein 3329 34.89 -1 4426636..4426956 + 106 73670889 - Mbar_A3451 - hypothetical protein 3330 48.13 +1 4427143..4428372 - 409 73670890 hisS Mbar_A3452 - histidyl-tRNA synthetase 3331 45.54 0 4428727..4430217 + 496 73670891 - Mbar_A3453 - L-threonine O-3-phosphate decarboxylase 3332 46.50 0 4430214..4431200 + 328 73670892 - Mbar_A3454 - adenosylcobinamide-phosphate synthase 3333 44.75 0 4431343..4431885 + 180 73670893 - Mbar_A3455 - hypothetical protein 3334 45.08 0 4431920..4432762 + 280 73670894 - Mbar_A3456 - cobalamin-5'-phosphate synthase 3335 43.63 0 4432747..4433358 + 203 73670895 - Mbar_A3457 - putative nucleotidyltransferase 3336 47.54 +1 4433402..4434112 + 236 73670896 - Mbar_A3458 - ABC transporter, ATP-binding protein 3337 44.86 0 4434116..4435078 + 320 73670897 - Mbar_A3459 - ABC transporter, ATP-binding protein 3338 38.85 0 4435111..4435563 + 150 73670898 - Mbar_A3460 - hypothetical protein 3339 41.31 0 4436688..4441691 + 1667 73670899 - Mbar_A3461 - hypothetical protein 3340 39.91 0 4441941..4442624 - 227 73670900 - Mbar_A3462 - hypothetical protein 3341 46.02 0 4442964..4444145 - 393 73670901 - Mbar_A3463 - aminotransferase 3342 43.50 0 4444226..4444717 - 163 73670902 - Mbar_A3464 - AsnC family transcriptional regulator 3343 43.12 0 4444788..4445165 - 125 73670903 - Mbar_A3465 - 30S ribosomal protein S8e 3344 38.84 0 4446107..4446433 + 108 73670904 - Mbar_A3466 - hypothetical protein 3345 46.23 0 4446799..4447488 + 229 73670905 - Mbar_A3467 - hypothetical protein 3346 39.49 0 4447880..4448431 - 183 73670906 - Mbar_A3468 - multimeric flavodoxin WrbA family protein 3347 38.26 0 4448424..4449032 - 202 73670907 - Mbar_A3469 - galactoside-O-acetyltransferase 3348 41.92 0 4450089..4450589 + 166 73670908 - Mbar_A3470 - hypothetical protein 3349 47.32 +1 4450778..4451392 + 204 73670909 - Mbar_A3471 - orotate phosphoribosyltransferase 3350 45.05 0 4451959..4454091 - 710 73670910 - Mbar_A3472 - hypothetical protein 3351 40.63 0 4454777..4455571 + 264 73670911 - Mbar_A3473 - SPFH domain-containing protein/band 7 family protein 3352 42.44 0 4455616..4456944 + 442 73670912 - Mbar_A3474 - nodulation efficiency protein NfeD 3353 46.29 0 4457199..4458533 - 444 73670913 - Mbar_A3475 - hypothetical protein 3354 47.45 +1 4458729..4459337 - 202 73670914 hisH Mbar_A3476 - imidazole glycerol phosphate synthase subunit HisH 3355 43.52 0 4459496..4459711 - 71 73670915 - Mbar_A3477 - hypothetical protein 3356 34.24 -1 4460232..4461005 - 257 73670916 - Mbar_A3478 - hypothetical protein 3357 44.24 0 4462681..4463166 + 161 73670917 - Mbar_A3480 - hypothetical protein 3358 44.37 0 4463209..4463670 + 153 73670918 - Mbar_A3481 - hypothetical protein 3359 39.48 0 4465553..4466170 + 205 73670919 - Mbar_A3483 - hypothetical protein 3360 43.35 0 4466798..4467346 + 182 73670920 - Mbar_A3484 - hypothetical protein 3361 48.40 +1 4467368..4469146 - 592 73670921 - Mbar_A3485 - multidrug efflux protein 3362 43.59 0 4469152..4469619 - 155 73670922 - Mbar_A3486 - PadR family transcriptional regulator 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0