version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3214 41.94 0 4277155..4277514 + 119 73670774 - Mbar_A3331 - hypothetical protein 3215 36.93 -1 4278465..4278992 - 175 73670775 - Mbar_A3332 - hypothetical protein 3216 42.61 0 4279236..4280000 - 254 73670776 - Mbar_A3333 - DNA-3-methyladenine glycosylase III 3217 36.69 -1 4280367..4280873 - 168 73670777 - Mbar_A3334 - hypothetical protein 3218 42.60 0 4281162..4282553 - 463 73670778 - Mbar_A3335 - ABC transporter, permease protein 3219 42.50 0 4282588..4283961 - 457 73670779 - Mbar_A3336 - hypothetical protein 3220 44.26 0 4284248..4284988 - 246 73670780 - Mbar_A3337 - ABC transporter, ATP-binding protein 3221 29.17 -2 4285112..4285327 + 71 73670781 - Mbar_A3338 - hypothetical protein 3222 41.06 0 4285435..4285641 - 68 73670782 - Mbar_A3339 - transcriptional regulator 3223 35.61 -1 4285661..4286056 - 131 73670783 - Mbar_A3340 - hypothetical protein 3224 42.96 0 4286616..4287197 + 193 73670784 - Mbar_A3341 - hypothetical protein 3225 44.44 0 4287428..4289083 - 551 73670785 - Mbar_A3342 - adenine deaminase 3226 42.28 0 4289515..4290375 + 286 73670786 - Mbar_A3343 - acetyltransferase 3227 33.18 -1 4290419..4293097 - 892 73670787 - Mbar_A3344 - hypothetical protein 3228 48.64 +1 4293324..4297100 + 1258 73670788 - Mbar_A3345 - 5-oxoprolinase (ATP-hydrolyzing) 3229 39.65 0 4297714..4298616 - 300 73670789 - Mbar_A3346 - hypothetical protein 3230 42.39 0 4299519..4300004 - 161 73670790 - Mbar_A3347 - hypothetical protein 3231 38.42 0 4300056..4300409 - 117 73670791 - Mbar_A3348 - hypothetical protein 3232 45.33 0 4300992..4301558 + 188 73670792 - Mbar_A3349 - flavoredoxin Flr 3233 45.36 0 4301841..4303037 - 398 73670793 - Mbar_A3350 - aldo/keto reductase 3234 41.01 0 4305318..4306529 + 403 73670794 - Mbar_A3353 - flavoprotein A 3235 38.89 0 4306920..4307099 + 59 73670795 - Mbar_A3354 - hypothetical protein 3236 36.26 -1 4308810..4310417 + 535 73670796 - Mbar_A3357 - hypothetical protein 3237 35.98 -1 4310427..4311332 + 301 73670797 - Mbar_A3358 - putative ABC-2 type transport system permease protein 3238 36.50 -1 4311338..4312222 + 294 73670798 - Mbar_A3359 - hypothetical protein 3239 33.86 -1 4313946..4314710 + 254 73670799 - Mbar_A3361 - hypothetical protein 3240 36.81 -1 4314847..4316571 - 574 73670800 - Mbar_A3362 - hypothetical protein 3241 36.34 -1 4316702..4318399 - 565 73670801 - Mbar_A3363 - hypothetical protein 3242 36.11 -1 4318537..4320192 - 551 73670802 - Mbar_A3364 - hypothetical protein 3243 38.31 0 4320347..4321231 - 294 73670803 - Mbar_A3365 - hypothetical protein 3244 36.59 -1 4321244..4322104 - 286 73670804 - Mbar_A3366 - hypothetical protein 3245 36.62 -1 4322109..4323782 - 557 73670805 - Mbar_A3367 - hypothetical protein 3246 43.81 0 4323879..4324298 - 139 73670806 - Mbar_A3368 - hypothetical protein 3247 40.79 0 4324762..4326330 + 522 73670807 - Mbar_A3369 - hypothetical protein 3248 42.48 0 4326405..4327475 + 356 73670808 - Mbar_A3370 - ABC transporter, ATP-binding protein 3249 37.37 0 4328545..4329312 + 255 73670809 - Mbar_A3371 - hypothetical protein 3250 34.28 -1 4329956..4331014 + 352 73670810 - Mbar_A3372 - cell surface protein 3251 36.50 -1 4331171..4332781 - 536 73670811 - Mbar_A3373 - hypothetical protein 3252 40.60 0 4333101..4334531 + 476 73670812 - Mbar_A3374 - hypothetical protein 3253 37.30 0 4334518..4335072 + 184 73670813 - Mbar_A3375 - hypothetical protein 3254 39.32 0 4335751..4336251 + 166 73670814 - Mbar_A3376 - hypothetical protein 3255 34.38 -1 4336211..4336975 + 254 73670815 - Mbar_A3377 - hypothetical protein 3256 38.87 0 4337526..4338302 + 258 73670816 - Mbar_A3378 - hypothetical protein 3257 30.34 -2 4338390..4339058 + 222 73670817 - Mbar_A3379 - hypothetical protein 3258 30.57 -2 4339055..4339705 + 216 73670818 - Mbar_A3380 - hypothetical protein 3259 34.01 -1 4339767..4340807 + 346 73670819 - Mbar_A3381 - hypothetical protein 3260 36.04 -1 4340896..4342005 + 369 73670820 - Mbar_A3382 - hypothetical protein 3261 48.57 +1 4342497..4342916 - 139 73670821 - Mbar_A3383 - 30S ribosomal protein S6e 3262 47.13 +1 4343066..4344841 - 591 73670822 - Mbar_A3384 - translation initiation factor IF-2 3263 48.00 +1 4344996..4345445 - 149 73670823 - Mbar_A3385 - nucleoside diphosphate kinase 3264 44.97 0 4345486..4345674 - 62 73670824 - Mbar_A3386 - 50S ribosomal protein L24e 3265 49.10 +1 4345690..4345911 - 73 73670825 rps28e Mbar_A3387 - 30S ribosomal protein S28e 3266 45.18 0 4345936..4346298 - 120 73670826 rpl7ae Mbar_A3388 - 50S ribosomal protein L7Ae 3267 42.28 0 4346607..4347254 + 215 73670827 - Mbar_A3389 - hypothetical protein 3268 41.94 0 4347928..4349391 - 487 73670828 - Mbar_A3390 - hypothetical protein 3269 29.35 -2 4349574..4349774 - 66 73670829 - Mbar_A3391 - hypothetical protein 3270 30.63 -2 4349755..4350087 - 110 73670830 - Mbar_A3392 - hypothetical protein 3271 42.24 0 4350837..4352531 - 564 73670831 - Mbar_A3393 - cell surface protein 3272 44.35 0 4352888..4353577 + 229 73670832 - Mbar_A3394 - uncharacterized Fe-S protein 3273 34.15 -1 4354157..4355011 - 284 73670833 - Mbar_A3395 - hypothetical protein 3274 37.84 0 4355407..4355850 + 147 73670834 - Mbar_A3396 - hypothetical protein 3275 31.91 -2 4356297..4356788 + 163 73670835 - Mbar_A3397 - hypothetical protein 3276 36.35 -1 4356907..4357404 - 165 73670836 - Mbar_A3398 - ribosomal-protein-alanine acetyltransferase 3277 37.78 0 4358074..4364364 - 2096 73670837 - Mbar_A3399 - hypothetical protein 3278 45.48 0 4364898..4365284 - 128 73670838 - Mbar_A3400 - F420H2 dehydrogenase subunit O 3279 48.55 +1 4365298..4366743 - 481 73670839 - Mbar_A3401 - F420H2 dehydrogenase subunit N 3280 48.19 +1 4366747..4368234 - 495 73670840 - Mbar_A3402 - F420H2 dehydrogenase subunit M 3281 48.05 +1 4368234..4370237 - 667 73670841 - Mbar_A3403 - F420H2 dehydrogenase subunit L 3282 45.87 0 4370246..4370548 - 100 73670842 - Mbar_A3404 - F420H2 dehydrogenase subunit K 3283 48.81 +1 4370677..4370928 - 83 73670843 - Mbar_A3405 - F420H2 dehydrogenase subunit 3284 45.02 0 4370918..4371208 - 96 73670844 - Mbar_A3406 - NADH dehydrogenase subunit J 3285 47.20 +1 4371205..4371615 - 136 73670845 - Mbar_A3407 - F420H2 dehydrogenase subunit I 3286 44.67 0 4371619..4372659 - 346 73670846 - Mbar_A3408 - F420H2 dehydrogenase subunit H 3287 46.67 +1 4372665..4373789 - 374 73670847 - Mbar_A3409 - F420H2 dehydrogenase subunit D 3288 43.19 0 4373799..4374275 - 158 73670848 - Mbar_A3410 - NADH dehydrogenase subunit C 3289 43.60 0 4374323..4374877 - 184 73670849 - Mbar_A3411 - F420H2 dehydrogenase subunit B 3290 42.93 0 4374865..4375239 - 124 73670850 - Mbar_A3412 - F420H2 dehydrogenase subunit A 3291 47.53 +1 4376495..4376656 + 53 73670851 - Mbar_A3413 - putative ferredoxin 3292 46.79 +1 4376653..4377930 + 425 73670852 - Mbar_A3414 - phytoene dehydrogenase family protein 3293 46.93 +1 4377988..4378965 + 325 73670853 cofG Mbar_A3415 - FO synthase subunit 1 3294 46.15 0 4378993..4380123 + 376 73670854 - Mbar_A3416 - FO synthase subunit 2 3295 45.89 0 4380180..4381334 + 384 73670855 - Mbar_A3417 - FO synthase subunit 2 3296 43.22 0 4381752..4382378 + 208 73670856 - Mbar_A3418 - hypothetical protein 3297 34.32 -1 4382591..4383196 + 201 73670857 - Mbar_A3419 - transcription regulation protein 3298 43.46 0 4383300..4384820 + 506 73670858 - Mbar_A3420 - MoaA/NifB/PqqE family protein 3299 48.02 +1 4385319..4385495 + 58 73670859 - Mbar_A3421 - ferredoxin 3300 46.24 0 4385492..4386715 + 407 73670860 - Mbar_A3422 - geranylgeranyl reductase 3301 42.49 0 4387695..4389125 - 476 73670861 - Mbar_A3423 - trk system potassium uptake protein 3302 44.10 0 4389181..4390527 - 448 73670862 trkA Mbar_A3424 - potassium transporter peripheral membrane component 3303 41.76 0 4391026..4391844 - 272 73670863 - Mbar_A3425 - molybdenum ABC transporter, solute-binding protein 3304 34.76 -1 4392270..4392902 - 210 73670864 - Mbar_A3426 - hypothetical protein 3305 39.29 0 4393481..4394185 - 234 73670865 - Mbar_A3427 - ArsR family transcriptional regulator 3306 35.13 -1 4394471..4395139 + 222 73670866 - Mbar_A3428 - cytochrome c-type biogenesis protein ccdA 3307 41.46 0 4395450..4396901 - 483 73670867 - Mbar_A3429 - sodium transport protein 3308 43.50 0 4396905..4398251 - 448 73670868 trkA Mbar_A3430 - potassium transporter peripheral membrane component 3309 30.91 -2 4398590..4398919 + 109 73670869 - Mbar_A3431 - hypothetical protein 3310 47.81 +1 4398991..4400157 - 388 73670870 - Mbar_A3432 - chaperone protein 3311 47.67 +1 4400267..4402129 - 620 73670871 - Mbar_A3433 - heat shock protein 70 3312 44.13 0 4402413..4403042 - 209 73670872 - Mbar_A3434 - heat shock protein 3313 40.96 0 4403170..4403628 - 152 73670873 - Mbar_A3435 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0