version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3170 36.13 -1 4222723..4223151 - 142 73670730 - Mbar_A3284 - hypothetical protein 3171 46.35 0 4224013..4224642 + 209 73670731 - Mbar_A3285 - AraC family transcriptional regulator 3172 39.11 0 4224658..4225107 + 149 73670732 - Mbar_A3286 - acetyltransferase 3173 49.39 +1 4225517..4226338 - 273 73670733 - Mbar_A3287 - nitroreductase 3174 40.56 0 4226485..4227204 - 239 73670734 - Mbar_A3288 - hypothetical protein 3175 42.86 0 4227654..4228577 - 307 73670735 - Mbar_A3289 - hypothetical protein 3176 31.17 -2 4229014..4230078 + 354 73670736 - Mbar_A3290 - transposase, putative 3177 47.47 +1 4230101..4230991 - 296 73670737 - Mbar_A3291 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3178 43.20 0 4231171..4231464 - 97 73670738 - Mbar_A3292 - hypothetical protein 3179 45.08 0 4231464..4232093 - 209 73670739 - Mbar_A3293 - hypothetical protein 3180 44.84 0 4232108..4233028 - 306 73670740 - Mbar_A3294 - hypothetical protein 3181 47.12 +1 4233132..4234052 - 306 73670741 - Mbar_A3295 - hypothetical protein 3182 38.80 0 4234148..4234513 - 121 73670742 - Mbar_A3296 - TetR family transcriptional regulator 3183 37.71 0 4234544..4234840 - 98 73670743 - Mbar_A3297 - TetR family transcriptional regulator 3184 43.66 0 4235601..4236665 - 354 73670744 - Mbar_A3298 - hypothetical protein 3185 43.92 0 4237127..4237636 - 169 73670745 - Mbar_A3299 - NADPH-flavin oxidoreductase 3186 35.69 -1 4238202..4239134 + 310 73670746 - Mbar_A3300 - hypothetical protein 3187 39.92 0 4239254..4239982 + 242 73670747 - Mbar_A3301 - hypothetical protein 3188 42.23 0 4240277..4240849 - 190 73670748 - Mbar_A3302 - isochorismatase 3189 31.17 -2 4241093..4242157 + 354 73670749 - Mbar_A3303 - transposase, putative 3190 45.89 0 4243519..4244187 - 222 73670750 - Mbar_A3305 - iron-sulfur flavoprotein 3191 45.17 0 4244250..4245728 - 492 73670751 - Mbar_A3306 - efflux PumP antibiotic resistance protein 3192 46.61 +1 4246554..4247675 + 373 73670752 - Mbar_A3307 - hypothetical protein 3193 45.05 0 4247827..4249635 - 602 73670753 - Mbar_A3308 - hypothetical protein 3194 45.86 0 4249724..4250266 - 180 73670754 - Mbar_A3309 - intracellular protease 3195 44.47 0 4250681..4252036 - 451 73670755 - Mbar_A3310 - integral membrane protein 3196 32.28 -1 4253194..4253571 - 125 73670756 - Mbar_A3311 - hypothetical protein 3197 39.34 0 4254434..4254766 + 110 73670757 - Mbar_A3312 - ArsR family transcriptional regulator 3198 42.57 0 4254953..4256110 + 385 73670758 - Mbar_A3313 - hypothetical protein 3199 42.73 0 4256256..4257617 + 453 73670759 - Mbar_A3314 - hypothetical protein 3200 43.95 0 4258813..4259217 + 134 73670760 - Mbar_A3316 - hypothetical protein 3201 48.98 +1 4259150..4259590 + 146 73670761 - Mbar_A3317 - hypothetical protein 3202 43.59 0 4259837..4260499 - 220 73670762 - Mbar_A3318 - thiamin-phosphate pyrophosphorylase 3203 43.64 0 4260664..4261449 - 261 73670763 - Mbar_A3319 - hydroxyethylthiazole kinase 3204 39.95 0 4262784..4263161 + 125 73670764 - Mbar_A3321 - chemotaxis protein 3205 42.64 0 4263499..4264476 + 325 73670765 - Mbar_A3322 - NADH-dependent flavine oxidoreductase 3206 29.56 -2 4264834..4265442 - 202 73670766 - Mbar_A3323 - hypothetical protein 3207 36.51 -1 4266580..4267554 - 324 73670767 - Mbar_A3324 - hypothetical protein 3208 39.19 0 4267921..4270737 + 938 73670768 - Mbar_A3325 - cell surface protein 3209 40.28 0 4270740..4271027 + 95 73670769 - Mbar_A3326 - cell surface protein 3210 41.72 0 4271529..4271957 + 142 73670770 - Mbar_A3327 - hypothetical protein 3211 44.23 0 4272743..4274431 - 562 73670771 - Mbar_A3328 - hypothetical protein 3212 46.76 +1 4274650..4276146 - 498 73670772 - Mbar_A3329 - MoxR-related protein 3213 38.60 0 4276662..4277117 + 151 73670773 - Mbar_A3330 - transcription repressor 3214 41.94 0 4277155..4277514 + 119 73670774 - Mbar_A3331 - hypothetical protein 3215 36.93 -1 4278465..4278992 - 175 73670775 - Mbar_A3332 - hypothetical protein 3216 42.61 0 4279236..4280000 - 254 73670776 - Mbar_A3333 - DNA-3-methyladenine glycosylase III 3217 36.69 -1 4280367..4280873 - 168 73670777 - Mbar_A3334 - hypothetical protein 3218 42.60 0 4281162..4282553 - 463 73670778 - Mbar_A3335 - ABC transporter, permease protein 3219 42.50 0 4282588..4283961 - 457 73670779 - Mbar_A3336 - hypothetical protein 3220 44.26 0 4284248..4284988 - 246 73670780 - Mbar_A3337 - ABC transporter, ATP-binding protein 3221 29.17 -2 4285112..4285327 + 71 73670781 - Mbar_A3338 - hypothetical protein 3222 41.06 0 4285435..4285641 - 68 73670782 - Mbar_A3339 - transcriptional regulator 3223 35.61 -1 4285661..4286056 - 131 73670783 - Mbar_A3340 - hypothetical protein 3224 42.96 0 4286616..4287197 + 193 73670784 - Mbar_A3341 - hypothetical protein 3225 44.44 0 4287428..4289083 - 551 73670785 - Mbar_A3342 - adenine deaminase 3226 42.28 0 4289515..4290375 + 286 73670786 - Mbar_A3343 - acetyltransferase 3227 33.18 -1 4290419..4293097 - 892 73670787 - Mbar_A3344 - hypothetical protein 3228 48.64 +1 4293324..4297100 + 1258 73670788 - Mbar_A3345 - 5-oxoprolinase (ATP-hydrolyzing) 3229 39.65 0 4297714..4298616 - 300 73670789 - Mbar_A3346 - hypothetical protein 3230 42.39 0 4299519..4300004 - 161 73670790 - Mbar_A3347 - hypothetical protein 3231 38.42 0 4300056..4300409 - 117 73670791 - Mbar_A3348 - hypothetical protein 3232 45.33 0 4300992..4301558 + 188 73670792 - Mbar_A3349 - flavoredoxin Flr 3233 45.36 0 4301841..4303037 - 398 73670793 - Mbar_A3350 - aldo/keto reductase 3234 41.01 0 4305318..4306529 + 403 73670794 - Mbar_A3353 - flavoprotein A 3235 38.89 0 4306920..4307099 + 59 73670795 - Mbar_A3354 - hypothetical protein 3236 36.26 -1 4308810..4310417 + 535 73670796 - Mbar_A3357 - hypothetical protein 3237 35.98 -1 4310427..4311332 + 301 73670797 - Mbar_A3358 - putative ABC-2 type transport system permease protein 3238 36.50 -1 4311338..4312222 + 294 73670798 - Mbar_A3359 - hypothetical protein 3239 33.86 -1 4313946..4314710 + 254 73670799 - Mbar_A3361 - hypothetical protein 3240 36.81 -1 4314847..4316571 - 574 73670800 - Mbar_A3362 - hypothetical protein 3241 36.34 -1 4316702..4318399 - 565 73670801 - Mbar_A3363 - hypothetical protein 3242 36.11 -1 4318537..4320192 - 551 73670802 - Mbar_A3364 - hypothetical protein 3243 38.31 0 4320347..4321231 - 294 73670803 - Mbar_A3365 - hypothetical protein 3244 36.59 -1 4321244..4322104 - 286 73670804 - Mbar_A3366 - hypothetical protein 3245 36.62 -1 4322109..4323782 - 557 73670805 - Mbar_A3367 - hypothetical protein 3246 43.81 0 4323879..4324298 - 139 73670806 - Mbar_A3368 - hypothetical protein 3247 40.79 0 4324762..4326330 + 522 73670807 - Mbar_A3369 - hypothetical protein 3248 42.48 0 4326405..4327475 + 356 73670808 - Mbar_A3370 - ABC transporter, ATP-binding protein 3249 37.37 0 4328545..4329312 + 255 73670809 - Mbar_A3371 - hypothetical protein 3250 34.28 -1 4329956..4331014 + 352 73670810 - Mbar_A3372 - cell surface protein 3251 36.50 -1 4331171..4332781 - 536 73670811 - Mbar_A3373 - hypothetical protein 3252 40.60 0 4333101..4334531 + 476 73670812 - Mbar_A3374 - hypothetical protein 3253 37.30 0 4334518..4335072 + 184 73670813 - Mbar_A3375 - hypothetical protein 3254 39.32 0 4335751..4336251 + 166 73670814 - Mbar_A3376 - hypothetical protein 3255 34.38 -1 4336211..4336975 + 254 73670815 - Mbar_A3377 - hypothetical protein 3256 38.87 0 4337526..4338302 + 258 73670816 - Mbar_A3378 - hypothetical protein 3257 30.34 -2 4338390..4339058 + 222 73670817 - Mbar_A3379 - hypothetical protein 3258 30.57 -2 4339055..4339705 + 216 73670818 - Mbar_A3380 - hypothetical protein 3259 34.01 -1 4339767..4340807 + 346 73670819 - Mbar_A3381 - hypothetical protein 3260 36.04 -1 4340896..4342005 + 369 73670820 - Mbar_A3382 - hypothetical protein 3261 48.57 +1 4342497..4342916 - 139 73670821 - Mbar_A3383 - 30S ribosomal protein S6e 3262 47.13 +1 4343066..4344841 - 591 73670822 - Mbar_A3384 - translation initiation factor IF-2 3263 48.00 +1 4344996..4345445 - 149 73670823 - Mbar_A3385 - nucleoside diphosphate kinase 3264 44.97 0 4345486..4345674 - 62 73670824 - Mbar_A3386 - 50S ribosomal protein L24e 3265 49.10 +1 4345690..4345911 - 73 73670825 rps28e Mbar_A3387 - 30S ribosomal protein S28e 3266 45.18 0 4345936..4346298 - 120 73670826 rpl7ae Mbar_A3388 - 50S ribosomal protein L7Ae 3267 42.28 0 4346607..4347254 + 215 73670827 - Mbar_A3389 - hypothetical protein 3268 41.94 0 4347928..4349391 - 487 73670828 - Mbar_A3390 - hypothetical protein 3269 29.35 -2 4349574..4349774 - 66 73670829 - Mbar_A3391 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0