version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3125 32.38 -1 4157912..4158121 - 69 73670685 - Mbar_A3239 - transposase 3126 29.74 -2 4158118..4158312 - 64 73670686 - Mbar_A3240 - transposase 3127 36.12 -1 4158349..4159461 + 370 73670687 - Mbar_A3241 - transposase 3128 43.63 0 4159683..4160459 + 258 73670688 - Mbar_A3242 - DNA-(apurinic or apyrimidinic site) lyase 3129 40.85 0 4161051..4161356 + 101 73670689 - Mbar_A3243 - large conductance mechanosensitive channel protein 3130 37.30 0 4163057..4163686 - 209 73670690 - Mbar_A3244 - LysE type translocator 3131 46.88 +1 4164000..4164752 - 250 73670691 - Mbar_A3245 - multidrug ABC transporter, permease protein 3132 44.07 0 4164749..4165549 - 266 73670692 - Mbar_A3246 - ABC transporter, ATP-binding protein 3133 40.34 0 4166278..4168518 - 746 73670693 - Mbar_A3247 - sensory transduction histidine kinase 3134 37.81 0 4168551..4168997 - 148 73670694 - Mbar_A3248 - response regulator receiver 3135 37.25 0 4169341..4169646 - 101 73670695 - Mbar_A3249 - hypothetical protein 3136 39.74 0 4169579..4172638 - 1019 73670696 - Mbar_A3250 - sensory transduction histidine kinase 3137 48.79 +1 4173604..4174839 - 411 73670697 - Mbar_A3251 - S-adenosyl-L-homocysteine hydrolase 3138 47.04 +1 4175140..4176438 - 432 73670698 - Mbar_A3252 - N-ethylammeline chlorohydrolase 3139 46.52 0 4176780..4177439 - 219 73670699 - Mbar_A3253 - hypothetical protein 3140 45.80 0 4177436..4178197 - 253 73670700 - Mbar_A3254 - hypothetical protein 3141 48.55 +1 4178548..4179480 - 310 73670701 - Mbar_A3255 - pantothenate kinase 3142 48.10 +1 4179572..4180831 - 419 73670702 - Mbar_A3256 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3143 49.05 +1 4181319..4182215 + 298 73670703 - Mbar_A3257 - hypothetical protein 3144 40.71 0 4182413..4183144 + 243 73670704 - Mbar_A3258 - hypothetical protein 3145 32.40 -1 4183969..4184715 - 248 73670705 - Mbar_A3259 - hypothetical protein 3146 45.45 0 4185493..4186284 + 263 73670706 - Mbar_A3260 - 23S RNA methyltransferase J 3147 51.23 +1 4186504..4187151 + 215 73670707 - Mbar_A3261 - hypothetical protein 3148 46.83 +1 4187701..4188063 + 120 73670708 - Mbar_A3262 - hypothetical protein 3149 40.23 0 4188488..4189951 - 487 73670709 - Mbar_A3263 - hypothetical protein 3150 44.07 0 4190718..4193390 + 890 73670710 - Mbar_A3264 - phosphoenolpyruvate synthase 3151 39.31 0 4194169..4196007 + 612 73670711 - Mbar_A3265 - hypothetical protein 3152 45.12 0 4196168..4196659 - 163 73670712 - Mbar_A3266 - nitroreductase family protein 3153 37.97 0 4197439..4198344 - 301 73670713 - Mbar_A3267 - cation efflux system protein 3154 38.48 0 4198815..4199804 + 329 73670714 - Mbar_A3268 - hypothetical protein 3155 46.43 0 4199961..4201457 - 498 73670715 - Mbar_A3269 - type I restriction-modification system specificity subunit 3156 34.21 -1 4201897..4203258 - 453 73670716 - Mbar_A3270 - hypothetical protein 3157 35.51 -1 4203269..4205386 - 705 73670717 - Mbar_A3271 - hypothetical protein 3158 37.19 0 4205421..4206899 - 492 73670718 - Mbar_A3272 - type I restriction-modification system specificity subunit 3159 25.89 -2 4207135..4207806 - 223 73670719 - Mbar_A3273 - hypothetical protein 3160 44.30 0 4208140..4210893 - 917 73670720 - Mbar_A3274 - type I site-specific deoxyribonuclease 3161 42.18 0 4211041..4212171 - 376 73670721 - Mbar_A3275 - hypothetical protein 3162 35.53 -1 4213033..4213305 + 90 73670722 - Mbar_A3276 - hypothetical protein 3163 31.37 -2 4214018..4214323 - 101 73670723 - Mbar_A3277 - hypothetical protein 3164 42.62 0 4214456..4214821 + 121 73670724 - Mbar_A3278 - hypothetical protein 3165 42.45 0 4215131..4216336 - 401 73670725 - Mbar_A3279 - aminotransferase 3166 35.74 -1 4216793..4217995 - 400 73670726 - Mbar_A3280 - hypothetical protein 3167 31.70 -2 4218274..4218825 + 183 73670727 - Mbar_A3281 - hypothetical protein 3168 46.59 +1 4219687..4219965 + 92 73670728 - Mbar_A3282 - acylphosphatase 3169 44.06 0 4220085..4221650 - 521 73670729 - Mbar_A3283 - putative phosphoglycerate mutase 3170 36.13 -1 4222723..4223151 - 142 73670730 - Mbar_A3284 - hypothetical protein 3171 46.35 0 4224013..4224642 + 209 73670731 - Mbar_A3285 - AraC family transcriptional regulator 3172 39.11 0 4224658..4225107 + 149 73670732 - Mbar_A3286 - acetyltransferase 3173 49.39 +1 4225517..4226338 - 273 73670733 - Mbar_A3287 - nitroreductase 3174 40.56 0 4226485..4227204 - 239 73670734 - Mbar_A3288 - hypothetical protein 3175 42.86 0 4227654..4228577 - 307 73670735 - Mbar_A3289 - hypothetical protein 3176 31.17 -2 4229014..4230078 + 354 73670736 - Mbar_A3290 - transposase, putative 3177 47.47 +1 4230101..4230991 - 296 73670737 - Mbar_A3291 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3178 43.20 0 4231171..4231464 - 97 73670738 - Mbar_A3292 - hypothetical protein 3179 45.08 0 4231464..4232093 - 209 73670739 - Mbar_A3293 - hypothetical protein 3180 44.84 0 4232108..4233028 - 306 73670740 - Mbar_A3294 - hypothetical protein 3181 47.12 +1 4233132..4234052 - 306 73670741 - Mbar_A3295 - hypothetical protein 3182 38.80 0 4234148..4234513 - 121 73670742 - Mbar_A3296 - TetR family transcriptional regulator 3183 37.71 0 4234544..4234840 - 98 73670743 - Mbar_A3297 - TetR family transcriptional regulator 3184 43.66 0 4235601..4236665 - 354 73670744 - Mbar_A3298 - hypothetical protein 3185 43.92 0 4237127..4237636 - 169 73670745 - Mbar_A3299 - NADPH-flavin oxidoreductase 3186 35.69 -1 4238202..4239134 + 310 73670746 - Mbar_A3300 - hypothetical protein 3187 39.92 0 4239254..4239982 + 242 73670747 - Mbar_A3301 - hypothetical protein 3188 42.23 0 4240277..4240849 - 190 73670748 - Mbar_A3302 - isochorismatase 3189 31.17 -2 4241093..4242157 + 354 73670749 - Mbar_A3303 - transposase, putative 3190 45.89 0 4243519..4244187 - 222 73670750 - Mbar_A3305 - iron-sulfur flavoprotein 3191 45.17 0 4244250..4245728 - 492 73670751 - Mbar_A3306 - efflux PumP antibiotic resistance protein 3192 46.61 +1 4246554..4247675 + 373 73670752 - Mbar_A3307 - hypothetical protein 3193 45.05 0 4247827..4249635 - 602 73670753 - Mbar_A3308 - hypothetical protein 3194 45.86 0 4249724..4250266 - 180 73670754 - Mbar_A3309 - intracellular protease 3195 44.47 0 4250681..4252036 - 451 73670755 - Mbar_A3310 - integral membrane protein 3196 32.28 -1 4253194..4253571 - 125 73670756 - Mbar_A3311 - hypothetical protein 3197 39.34 0 4254434..4254766 + 110 73670757 - Mbar_A3312 - ArsR family transcriptional regulator 3198 42.57 0 4254953..4256110 + 385 73670758 - Mbar_A3313 - hypothetical protein 3199 42.73 0 4256256..4257617 + 453 73670759 - Mbar_A3314 - hypothetical protein 3200 43.95 0 4258813..4259217 + 134 73670760 - Mbar_A3316 - hypothetical protein 3201 48.98 +1 4259150..4259590 + 146 73670761 - Mbar_A3317 - hypothetical protein 3202 43.59 0 4259837..4260499 - 220 73670762 - Mbar_A3318 - thiamin-phosphate pyrophosphorylase 3203 43.64 0 4260664..4261449 - 261 73670763 - Mbar_A3319 - hydroxyethylthiazole kinase 3204 39.95 0 4262784..4263161 + 125 73670764 - Mbar_A3321 - chemotaxis protein 3205 42.64 0 4263499..4264476 + 325 73670765 - Mbar_A3322 - NADH-dependent flavine oxidoreductase 3206 29.56 -2 4264834..4265442 - 202 73670766 - Mbar_A3323 - hypothetical protein 3207 36.51 -1 4266580..4267554 - 324 73670767 - Mbar_A3324 - hypothetical protein 3208 39.19 0 4267921..4270737 + 938 73670768 - Mbar_A3325 - cell surface protein 3209 40.28 0 4270740..4271027 + 95 73670769 - Mbar_A3326 - cell surface protein 3210 41.72 0 4271529..4271957 + 142 73670770 - Mbar_A3327 - hypothetical protein 3211 44.23 0 4272743..4274431 - 562 73670771 - Mbar_A3328 - hypothetical protein 3212 46.76 +1 4274650..4276146 - 498 73670772 - Mbar_A3329 - MoxR-related protein 3213 38.60 0 4276662..4277117 + 151 73670773 - Mbar_A3330 - transcription repressor 3214 41.94 0 4277155..4277514 + 119 73670774 - Mbar_A3331 - hypothetical protein 3215 36.93 -1 4278465..4278992 - 175 73670775 - Mbar_A3332 - hypothetical protein 3216 42.61 0 4279236..4280000 - 254 73670776 - Mbar_A3333 - DNA-3-methyladenine glycosylase III 3217 36.69 -1 4280367..4280873 - 168 73670777 - Mbar_A3334 - hypothetical protein 3218 42.60 0 4281162..4282553 - 463 73670778 - Mbar_A3335 - ABC transporter, permease protein 3219 42.50 0 4282588..4283961 - 457 73670779 - Mbar_A3336 - hypothetical protein 3220 44.26 0 4284248..4284988 - 246 73670780 - Mbar_A3337 - ABC transporter, ATP-binding protein 3221 29.17 -2 4285112..4285327 + 71 73670781 - Mbar_A3338 - hypothetical protein 3222 41.06 0 4285435..4285641 - 68 73670782 - Mbar_A3339 - transcriptional regulator 3223 35.61 -1 4285661..4286056 - 131 73670783 - Mbar_A3340 - hypothetical protein 3224 42.96 0 4286616..4287197 + 193 73670784 - Mbar_A3341 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0