version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 266 42.83 0 326121..326720 - 199 73667825 - Mbar_A0276 - hypothetical protein 267 41.11 0 327107..327466 + 119 73667826 - Mbar_A0277 - hypothetical protein 268 45.04 0 328027..328590 - 187 73667827 - Mbar_A0278 - nucleoside-triphosphatase 269 47.80 +1 328583..330220 - 545 73667828 - Mbar_A0279 - O-sialoglycoprotein endopeptidase/protein kinase 270 45.23 0 330591..333632 - 1013 73667829 - Mbar_A0280 - TPR domain-containing protein 271 43.33 0 334010..334159 - 49 73667830 - Mbar_A0281 - 30S ribosomal protein S27ae 272 44.12 0 334175..334480 - 101 73667831 rps24e Mbar_A0282 - 30S ribosomal protein S24e 273 45.41 0 334461..335048 - 195 73667832 - Mbar_A0283 - hypothetical protein 274 46.77 +1 335050..335235 - 61 73667833 - Mbar_A0284 - DNA-directed RNA polymerase, subunit E'' 275 45.30 0 335253..335837 - 194 73667834 - Mbar_A0285 - DNA-directed RNA polymerase subunit E' 276 44.72 0 335894..336262 - 122 73667835 - Mbar_A0286 - hypothetical protein 277 45.67 0 336259..337539 - 426 73667836 - Mbar_A0287 - translation initiation factor IF-2 subunit gamma 278 45.70 0 337834..338997 - 387 73667837 purP Mbar_A0288 - 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein 279 39.81 0 339419..340159 - 246 73667838 - Mbar_A0289 - integral membrane protein 280 40.09 0 340238..341095 - 285 73667839 - Mbar_A0290 - hypothetical protein 281 46.87 +1 341921..342991 + 356 73667840 egsA Mbar_A0291 - NAD(P)-dependent glycerol-1-phosphate dehydrogenase 282 43.56 0 343426..343875 + 149 73667841 - Mbar_A0292 - hypothetical protein 283 47.33 +1 343950..344585 + 211 73667842 - Mbar_A0293 - hypothetical protein 284 44.95 0 344733..345920 - 395 73667843 - Mbar_A0294 - hypothetical protein 285 43.58 0 346397..347401 - 334 73667844 - Mbar_A0295 - sulfate adenylyltransferase (ADP) 286 44.81 0 347457..349268 - 603 73667845 - Mbar_A0296 - hypothetical protein 287 45.17 0 349682..350509 - 275 73667846 - Mbar_A0297 - ABC transporter, ATP-binding protein 288 39.78 0 350913..351269 + 118 73667847 - Mbar_A0298 - hypothetical protein 289 40.40 0 351445..351939 - 164 73667848 - Mbar_A0299 - N-acetyltransferase 290 44.74 0 352165..352839 + 224 73667849 - Mbar_A0300 - hypothetical protein 291 36.57 -1 353461..354201 + 246 73667850 - Mbar_A0301 - CRISPR-associated Cas6 family protein 292 37.33 0 354215..354814 + 199 73667851 - Mbar_A0302 - hypothetical protein 293 40.64 0 355078..355857 + 259 73667852 - Mbar_A0303 - hypothetical protein 294 36.36 -1 355894..356157 + 87 73667853 - Mbar_A0304 - hypothetical protein 295 37.55 0 358540..358800 + 86 73667854 - Mbar_A0305 - hypothetical protein 296 36.62 -1 359947..361317 + 456 73667855 - Mbar_A0306 - hypothetical protein 297 40.92 0 361320..362321 + 333 73667856 - Mbar_A0307 - hypothetical protein 298 39.10 0 362323..362946 + 207 73667857 - Mbar_A0308 - hypothetical protein 299 35.44 -1 362969..365194 + 741 73667858 - Mbar_A0309 - hypothetical protein 300 47.28 +1 365339..365632 + 97 73667859 - Mbar_A0310 - hypothetical protein 301 46.38 0 365682..366248 + 188 73667860 - Mbar_A0311 - acetyltransferase related protein 302 35.32 -1 366851..367102 + 83 73667861 - Mbar_A0312 - hypothetical protein 303 33.07 -1 367104..367490 + 128 73667862 - Mbar_A0313 - hypothetical protein 304 37.58 0 367762..368397 + 211 73667863 - Mbar_A0314 - putative methyltransferase 305 40.85 0 368622..369473 + 283 73667864 ubiA Mbar_A0315 - prenyltransferase 306 44.62 0 369845..370801 + 318 73667865 - Mbar_A0316 - hypothetical protein 307 47.12 +1 371251..371649 - 132 73667866 - Mbar_A0317 - hypothetical protein 308 36.55 -1 372426..372767 + 113 73667867 - Mbar_A0318 - hypothetical protein 309 33.44 -1 374732..375646 - 304 73667868 - Mbar_A0319 - transposase 310 47.13 +1 376145..376405 + 86 73667869 - Mbar_A0320 - hypothetical protein 311 43.24 0 378705..380966 + 753 73667870 - Mbar_A0321 - amino acid permease 312 46.36 0 381490..381750 + 86 73667871 - Mbar_A0322 - hypothetical protein 313 44.44 0 382339..382509 + 56 73667872 - Mbar_A0323 - putative cation transport regulator 314 39.31 0 383213..384082 + 289 73667873 - Mbar_A0324 - hypothetical protein 315 40.62 0 384336..384815 + 159 73667874 - Mbar_A0325 - hypothetical protein 316 42.86 0 385649..385879 + 76 73667875 - Mbar_A0326 - gas vesicle synthesis protein GvpA 317 42.86 0 385913..386143 + 76 73667876 - Mbar_A0327 - gas vesicle synthesis protein GvpA 318 43.29 0 386177..386407 + 76 73667877 - Mbar_A0328 - gas vesicle synthesis protein GvpA 319 35.58 -1 386764..387075 + 103 73667878 - Mbar_A0329 - hypothetical protein 320 37.14 0 387749..389062 + 437 73667879 - Mbar_A0330 - hypothetical protein 321 33.91 -1 389243..389587 + 114 73667880 - Mbar_A0331 - hypothetical protein 322 33.79 -1 389974..390633 + 219 73667881 - Mbar_A0332 - GvpF 323 33.33 -1 390663..390914 + 83 73667882 - Mbar_A0333 - hypothetical protein 324 34.63 -1 390889..391197 + 102 73667883 - Mbar_A0334 - hypothetical protein 325 44.12 0 391493..391909 + 138 73667884 - Mbar_A0335 - hypothetical protein 326 38.26 0 391992..392681 + 229 73667885 - Mbar_A0336 - hypothetical protein 327 38.71 0 392665..393036 + 123 73667886 - Mbar_A0337 - hypothetical protein 328 36.69 -1 393221..394024 + 267 73667887 - Mbar_A0338 - GvpL 329 39.93 0 394021..394566 + 181 73667888 - Mbar_A0339 - hypothetical protein 330 28.79 -2 395669..396064 + 131 73667889 - Mbar_A0340 - PadR family transcriptional regulator 331 36.38 -1 396211..396801 + 196 73667890 - Mbar_A0341 - hypothetical protein 332 45.80 0 397171..397611 + 146 73667891 - Mbar_A0342 - hypothetical protein 333 41.80 0 398007..399944 - 645 73667892 - Mbar_A0343 - cadmium efflux ATPase 334 47.84 +1 400369..400761 + 130 73667893 - Mbar_A0344 - sirohydrochlorin cobaltochelatase 335 46.12 0 400788..402374 + 528 73667894 - Mbar_A0345 - UDP-N-acetylmuramoylalanine-D-glutamate ligase 336 45.82 0 402810..403922 + 370 73667895 - Mbar_A0346 - hypothetical protein 337 46.37 0 403960..404757 + 265 73667896 - Mbar_A0347 - nitrogenase iron protein subunit NifH 338 48.35 +1 404859..406343 + 494 73667897 - Mbar_A0348 - cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) 339 44.54 0 406711..407763 + 350 73667898 - Mbar_A0349 - tRNA splicing endonuclease 340 44.95 0 407935..408330 + 131 73667899 - Mbar_A0350 - hypothetical protein 341 44.93 0 408327..409637 + 436 73667900 - Mbar_A0351 - GTP-binding protein 342 45.93 0 410500..411174 + 224 73667901 - Mbar_A0352 - isoleucyl-tRNA synthetase 343 38.76 0 411346..411972 - 208 73667902 - Mbar_A0353 - ThiJ/PfpI family intracellular protease 344 34.03 -1 412196..412624 - 142 73667903 - Mbar_A0354 - hypothetical protein 345 34.74 -1 413474..415111 - 545 73667904 - Mbar_A0355 - transposase 346 40.84 0 415576..415908 + 110 73667905 - Mbar_A0356 - hypothetical protein 347 36.51 -1 416338..416526 - 62 73667906 - Mbar_A0357 - hypothetical protein 348 41.60 0 416848..417210 + 120 73667907 - Mbar_A0358 - hypothetical protein 349 45.35 0 417639..419969 + 776 73667908 - Mbar_A0359 - DNA repair protein 350 44.81 0 419966..423190 + 1074 73667909 - Mbar_A0360 - chromosome segregation protein 351 40.18 0 423336..424124 - 262 73667910 - Mbar_A0361 - hypothetical protein 352 42.54 0 424694..425410 - 238 73667911 - Mbar_A0362 - hypothetical protein 353 47.77 +1 425471..426322 - 283 73667912 - Mbar_A0363 - ribose-phosphate pyrophosphokinase 354 46.37 0 426399..426866 - 155 73667913 moaC Mbar_A0364 - putative molybdenum cofactor biosynthesis protein C 355 37.10 0 427137..427322 - 61 73667914 - Mbar_A0365 - hypothetical protein 356 48.11 +1 427403..428911 - 502 73667915 - Mbar_A0366 - putative sugar kinase 357 46.90 +1 429393..430859 + 488 73667916 - Mbar_A0367 - hypothetical protein 358 42.41 0 431073..433583 - 836 73667917 - Mbar_A0368 - oligosaccharyl transferase 359 38.98 0 434472..435569 + 365 73667918 - Mbar_A0369 - mannosyltransferase 360 32.94 -1 435660..436427 + 255 73667919 - Mbar_A0370 - putative ABC-2 type transport system permease protein 361 38.77 0 436452..437684 + 410 73667920 - Mbar_A0371 - putative ABC-2 type transport system ATP-binding protein 362 36.83 -1 438111..441368 + 1085 73667921 - Mbar_A0372 - hypothetical protein 363 37.69 0 441460..442629 + 389 73667922 - Mbar_A0373 - hexosyltransferase 364 34.19 -1 442632..443687 + 351 73667923 - Mbar_A0374 - glycosyltransferase 365 37.17 0 443684..444856 + 390 73667924 - Mbar_A0375 - hexosyltransferase 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0