version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3018 44.29 0 4021507..4022373 - 288 73670578 - Mbar_A3127 - shikimate kinase 3019 41.20 0 4022691..4023605 + 304 73670579 - Mbar_A3128 - hypothetical protein 3020 44.39 0 4024469..4025110 + 213 73670580 - Mbar_A3129 - GTP-binding protein 3021 40.00 0 4025116..4025475 + 119 73670581 - Mbar_A3130 - hypothetical protein 3022 38.79 0 4025490..4026002 + 170 73670582 - Mbar_A3131 - hypothetical protein 3023 41.63 0 4026261..4026875 + 204 73670583 - Mbar_A3132 - hexulose-6-phosphate isomerase 3024 47.80 +1 4026948..4028060 + 370 73670584 - Mbar_A3133 - aminotransferase 3025 31.19 -2 4028765..4029184 - 139 73670585 - Mbar_A3134 - hypothetical protein 3026 45.26 0 4030154..4030975 + 273 73670586 - Mbar_A3135 - cytochrome c-type biogenesis protein 3027 37.00 0 4031590..4031916 - 108 73670587 - Mbar_A3136 - hypothetical protein 3028 43.01 0 4033202..4033780 - 192 73670588 - Mbar_A3137 - hypothetical protein 3029 40.23 0 4034938..4037331 + 797 73670589 - Mbar_A3138 - glycosyltransferase (group I) 3030 45.89 0 4037612..4038646 + 344 73670590 - Mbar_A3139 - hypothetical protein 3031 41.68 0 4038779..4040155 + 458 73670591 - Mbar_A3140 - mannose-6-phosphate isomerase, bifunctional enzyme 3032 43.77 0 4040348..4040692 - 114 73670592 - Mbar_A3141 - hypothetical protein 3033 48.68 +1 4041205..4041960 - 251 73670593 - Mbar_A3142 - metal dependent hydrolase 3034 39.76 0 4042517..4044976 - 819 73670594 - Mbar_A3143 - cell surface protein 3035 39.71 0 4045359..4048274 - 971 73670595 - Mbar_A3144 - hypothetical protein 3036 38.56 0 4049113..4052403 - 1096 73670596 - Mbar_A3145 - hypothetical protein 3037 34.97 -1 4052907..4053395 - 162 73670597 - Mbar_A3146 - MarR family protein 3038 39.96 0 4054067..4054519 - 150 73670598 - Mbar_A3147 - universal stress protein 3039 41.50 0 4054645..4055709 - 354 73670599 - Mbar_A3148 - hypothetical protein 3040 39.67 0 4055702..4056838 - 378 73670600 - Mbar_A3149 - hypothetical protein 3041 42.02 0 4056835..4059102 - 755 73670601 - Mbar_A3150 - RND superfamily protein 3042 41.24 0 4060508..4060798 + 96 73670602 - Mbar_A3151 - hypothetical protein 3043 40.74 0 4061828..4063123 + 431 73670603 - Mbar_A3152 - hypothetical protein 3044 40.70 0 4063163..4065076 + 637 73670604 - Mbar_A3153 - hypothetical protein 3045 41.72 0 4065141..4067036 + 631 73670605 - Mbar_A3154 - hypothetical protein 3046 44.79 0 4067244..4067732 - 162 73670606 - Mbar_A3155 - hypothetical protein 3047 41.33 0 4068023..4068397 + 124 73670607 - Mbar_A3156 - hypothetical protein 3048 45.01 0 4070500..4071210 + 236 73670608 - Mbar_A3159 - FtsJ-like methyltransferase 3049 43.19 0 4071449..4072057 + 202 73670609 - Mbar_A3160 - hypothetical protein 3050 37.62 0 4072121..4072540 + 139 73670610 - Mbar_A3161 - hypothetical protein 3051 35.09 -1 4072576..4072803 + 75 73670611 - Mbar_A3162 - hypothetical protein 3052 38.13 0 4073342..4073800 + 152 73670612 - Mbar_A3163 - hypothetical protein 3053 36.61 -1 4073811..4074146 + 111 73670613 - Mbar_A3164 - hypothetical protein 3054 39.28 0 4074139..4075518 + 459 73670614 - Mbar_A3165 - Fe-S oxidoreductase 3055 33.33 -1 4076414..4076842 + 142 73670615 - Mbar_A3166 - hypothetical protein 3056 39.18 0 4077110..4078324 + 404 73670616 - Mbar_A3167 - tRNA nucleotidyltransferase 3057 35.03 -1 4079233..4079703 - 156 73670617 - Mbar_A3168 - hypothetical protein 3058 37.30 0 4079769..4080323 + 184 73670618 - Mbar_A3169 - hypothetical protein 3059 30.95 -2 4080320..4080445 + 41 73670619 - Mbar_A3170 - hypothetical protein 3060 48.66 +1 4080763..4082406 - 547 73670620 - Mbar_A3171 - thermosome subunit 3061 47.35 +1 4082642..4083340 - 232 73670621 - Mbar_A3172 - ribose-5-phosphate isomerase 3062 46.89 +1 4083448..4084782 - 444 73670622 aspC Mbar_A3173 - aspartyl-tRNA synthetase 3063 44.99 0 4085740..4086408 + 222 73670623 - Mbar_A3174 - 3',5'-cyclic-nucleotide phosphodiesterase 3064 46.31 0 4087042..4088451 + 469 73670624 - Mbar_A3175 - ammonium transporter 3065 39.94 0 4088453..4088800 + 115 73670625 - Mbar_A3176 - nitrogen regulatory protein P-II 3066 41.03 0 4088883..4089311 + 142 73670626 - Mbar_A3177 - hypothetical protein 3067 42.03 0 4089621..4090241 - 206 73670627 - Mbar_A3178 - xanthine-guanine phosphoribosyltransferase 3068 43.59 0 4090674..4091570 + 298 73670628 - Mbar_A3179 - hypothetical protein 3069 48.15 +1 4091614..4092504 - 296 73670629 - Mbar_A3180 - pyruvate ferredoxin oxidoreductase, beta subunit 3070 47.36 +1 4093347..4094708 - 453 73670630 - Mbar_A3181 - hypothetical protein 3071 45.52 0 4094771..4095049 - 92 73670631 - Mbar_A3182 - hypothetical protein 3072 39.02 0 4095526..4096035 - 169 73670632 aroK Mbar_A3183 - shikimate kinase 3073 38.38 0 4096475..4096870 - 131 73670633 - Mbar_A3184 - hypothetical protein 3074 41.33 0 4097283..4098020 + 245 73670634 - Mbar_A3185 - hypothetical protein 3075 42.08 0 4098017..4098736 + 239 73670635 - Mbar_A3186 - hypothetical protein 3076 46.25 0 4098916..4099449 - 177 73670636 - Mbar_A3187 - tRNA 2'-O-methylase 3077 46.68 +1 4099508..4101028 - 506 73670637 - Mbar_A3188 - thymidine phosphorylase 3078 41.20 0 4101666..4101881 - 71 73670638 - Mbar_A3189 - hypothetical protein 3079 41.44 0 4102586..4102807 - 73 73670639 - Mbar_A3190 - hypothetical protein 3080 45.13 0 4103863..4105320 + 485 73670640 - Mbar_A3191 - cobyric acid synthase 3081 46.28 0 4106255..4107235 - 326 73670641 - Mbar_A3192 - alanine dehydrogenase 3082 43.25 0 4107435..4108160 + 241 73670642 - Mbar_A3193 - hypothetical protein 3083 45.43 0 4108213..4109262 - 349 73670643 - Mbar_A3194 - O-GlcNAc transferase, p110 subunit 3084 40.00 0 4109674..4110063 - 129 73670644 - Mbar_A3195 - hypothetical protein 3085 43.62 0 4110486..4111292 + 268 73670645 - Mbar_A3196 - serine/threonine specific protein phosphatase 3086 46.13 0 4111550..4112737 - 395 73670646 - Mbar_A3197 - O-GlcNAc transferase, p110 subunit 3087 42.75 0 4113783..4114196 + 137 73670647 fxsA Mbar_A3198 - FxsA 3088 41.70 0 4114429..4115145 - 238 73670648 - Mbar_A3199 - hypothetical protein 3089 38.96 0 4115148..4115609 - 153 73670649 - Mbar_A3200 - hypothetical protein 3090 44.92 0 4116063..4117253 + 396 73670650 - Mbar_A3201 - cysteine desulphurase 3091 47.44 +1 4117319..4117708 + 129 73670651 - Mbar_A3202 - nitrogen fixation protein 3092 43.23 0 4118661..4119650 + 329 73670652 - Mbar_A3203 - SSU ribosomal protein S6P modification protein 3093 42.82 0 4119865..4120212 + 115 73670653 - Mbar_A3204 - peptidyl-tRNA hydrolase 3094 45.86 0 4120339..4121583 + 414 73670654 - Mbar_A3205 - hypothetical protein 3095 47.23 +1 4121622..4122938 + 438 73670655 truD Mbar_A3206 - tRNA pseudouridine synthase D 3096 45.58 0 4123205..4124608 - 467 73670656 - Mbar_A3207 - putative transmembrane efflux protein 3097 41.77 0 4125173..4125931 - 252 73670657 - Mbar_A3209 - hypothetical protein 3098 42.69 0 4125924..4128200 - 758 73670658 - Mbar_A3210 - hypothetical protein 3099 43.83 0 4128212..4129135 - 307 73670659 - Mbar_A3211 - ABC transporter ATP-binding protein 3100 42.07 0 4130855..4131415 + 186 73670660 - Mbar_A3213 - hypothetical protein 3101 40.79 0 4131606..4132235 + 209 73670661 - Mbar_A3214 - hypothetical protein 3102 37.91 0 4132310..4133008 + 232 73670662 - Mbar_A3215 - hypothetical protein 3103 41.88 0 4133638..4134105 - 155 73670663 - Mbar_A3216 - hypothetical protein 3104 34.09 -1 4134384..4135568 - 394 73670664 - Mbar_A3217 - transposase 3105 41.05 0 4135811..4136173 + 120 73670665 - Mbar_A3218 - universal stress protein 3106 46.24 0 4136331..4136609 - 92 73670666 - Mbar_A3219 - hypothetical protein 3107 47.68 +1 4136612..4137364 - 250 73670667 - Mbar_A3220 - phage shock protein A 3108 41.73 0 4137768..4138505 + 245 73670668 - Mbar_A3221 - ArsR family transcriptional regulator 3109 44.97 0 4138700..4139395 - 231 73670669 - Mbar_A3222 - hypothetical protein 3110 43.00 0 4139453..4140073 - 206 73670670 - Mbar_A3223 - hypothetical protein 3111 46.70 +1 4140345..4141511 - 388 73670671 - Mbar_A3224 - N(2),N(2)-dimethylguanosine tRNA methyltransferase 3112 45.66 0 4141536..4142192 - 218 73670672 - Mbar_A3225 - cell surface lipoprotein 3113 40.21 0 4142635..4143201 - 188 73670673 - Mbar_A3226 - hypothetical protein 3114 43.07 0 4144211..4145443 - 410 73670674 - Mbar_A3227 - hypothetical protein 3115 45.15 0 4146158..4146817 - 219 73670675 - Mbar_A3228 - hypothetical protein 3116 48.43 +1 4147096..4147731 + 211 73670676 - Mbar_A3229 - hypothetical protein 3117 46.53 +1 4147881..4149176 + 431 73670677 - Mbar_A3230 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0